Apostichopus japonicus (Japanese sea cucumber): 139974969
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Entry
139974969 CDS
T10891
Name
(RefSeq) methionine--tRNA ligase, mitochondrial-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00450
Selenocompound metabolism
ajj00970
Aminoacyl-tRNA biosynthesis
ajj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
139974969
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139974969
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ajj01007
]
139974969
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ajj03016
]
139974969
Enzymes [BR:
ajj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
139974969
Amino acid related enzymes [BR:
ajj01007
]
Aminoacyl-tRNA synthetase
Class I (U)
139974969
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
139974969
Prokaryotic type
Other AARSs
139974969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
Motif
Other DBs
NCBI-GeneID:
139974969
NCBI-ProteinID:
XP_071838638
LinkDB
All DBs
Position
10:complement(1843334..1856097)
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AA seq
564 aa
AA seq
DB search
MRLLLSLFTPLGKHVHPLKHVGFCRHLSSTAKLQNLNGFCISTPIFYVNAVPHIGHLYSA
VLADFAHRYHKLKGASGTIFSTGTDEHGLKIQQAAVAAGKDPQIFCDEVSKEFKRLFDRS
DVVYTDFIRTTEARHKKAVKCFWEKLFKSGFIYKGHYEGWYSTSDETFLPESQVTKAVDK
QGKEIQVSIDSGNLVEWTTETNYLFKLSEFQDSLSHWLESNPKSIQPSKFYSMVQGWIQG
GLKDLSVSRQRSRLEWGIPVPGDDSQTIYVWLDALINYITVCGYPDNISGWPGINIVGKD
ILKFHAIYWPAFLMAAGLDPPQSIVCHSHWTMDSFKMSKSRGNVVDPFNQLKKFSSDGLR
YFLLREGVLHSDGDYSERKVAKVLNVELADTLGNLLSRVTGAALNPHQQFPPFHQEYFPR
NGPRGAMSGVSKEDYNLLDALQKLPEVVDDHFSSFHVYKGLDEIMSCLRQANSFTQRHEP
WKLAKDEREKDRLETVLHVVMETLRLSGILLQPVTPNLAERLLNRLGIPATQRSFNDLRP
FSWQGGHLGEAEGIVFPKVEESLR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaggctattactctctctttttaccccattgggaaaacatgtccatcccctcaagcac
gttggattttgcagacatttgtcttcgactgcaaagttgcagaacttgaatggtttctgt
atttctacaccaatcttttatgtcaatgcagttccacacattggtcacctgtattctgca
gttttggcagactttgctcatagataccacaaattgaaaggggcatctggtacgattttt
tcaactggcacagatgagcatggattgaaaattcaacaggctgctgttgcagctgggaaa
gatcctcaaatcttctgcgatgaagtttccaaagaattcaagcgtttgtttgatagaagt
gatgtggtctacacagacttcatcagaacaacggaagcaaggcacaagaaagctgtgaaa
tgtttttgggagaagctgttcaagtctggattcatatacaaaggtcactacgagggatgg
tactctacttcagacgagacgtttctacccgagagccaggtcacaaaggctgttgataag
caaggaaaggaaattcaggtttccattgatagtggcaatctagtggaatggaccacagaa
accaactacttattcaaattaagcgagtttcaagacagtctaagtcattggttggaaagt
aatcccaaatccattcagccatcaaagttttactccatggtgcaggggtggattcaggga
ggtctcaaggatctatctgtttctcgtcagaggagtcgtctggagtggggtatcccagtg
ccaggagatgatagccaaacgatttatgtttggttggatgctttaataaattacatcaca
gtctgtggctatcctgataacatcagtggttggcccgggatcaatattgttggcaaagat
attttgaagtttcatgccatctactggccagcatttctaatggctgctggcttagaccct
ccccagtctatagtctgccattcacattggaccatggacagtttcaagatgtccaaaagt
agaggtaatgtggtggacccattcaaccaactcaaaaaattctcttcggacggtctgcgc
tattttctcttgagagagggtgtccttcattctgatggagattattccgaaaggaaagtg
gccaaggttttaaatgttgaattagcagacactttaggtaacctcctctccagagtgact
ggcgctgccctcaaccctcatcaacagttcccgccatttcaccaagagtattttcctcgg
aatggtcctcgaggtgcaatgtctggagtatccaaagaggattacaacttactagatgcc
ttgcaaaagttaccagaagtagtagacgatcacttcagctcgtttcatgtttacaaaggt
ttggatgaaatcatgtcatgtttaagacaggccaatagcttcacacaaagacacgaacct
tggaaactggcgaaagacgagagagagaaagaccgcttggagacagttttacatgttgtc
atggaaacgttaagattatcagggattctgctgcagcctgtgactccaaatttagcagaa
agacttttaaatagactaggtattccagcaacacagagaagcttcaatgaccttcgacca
tttagttggcaaggcggccatcttggtgaagctgaaggaatcgtcttcccaaaggtagaa
gaatctttgaggtga
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