Apostichopus japonicus (Japanese sea cucumber): 139975042
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Entry
139975042 CDS
T10891
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ajj03000
]
139975042
Transcription factors [BR:
ajj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139975042
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
139975042
NCBI-ProteinID:
XP_071838754
LinkDB
All DBs
Position
10:7487107..7491523
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AA seq
355 aa
AA seq
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MALNVDHHAPPQTELKPQPLSSPQPIVSTPGLPTPAHQPLGHVGIPMSHAHMTHSHSPTV
SKNAQNQQDRVKRPMNAFMVWSRGKRRQMAQENPKMHNSEISKRLGEEWKHLTDDQKKPF
IDEAKRLRAVHMKEHPDYKYRPRRKTKTLMKKDKYAIPGMLPPGADMQRTVGDGMQHYPP
SINGYMNGYPMMQEQLSHLQPHFGAGAQMGGNSGLHPRYEMGQLYAPMTSAHHAYLNPAA
GYGHYSSQAVPMHVPTGSAVPKSEQSSSPTGSAADRAHHPQGIPTRMHTADIKDMINVYL
PGDVANDPNAASRHHALQVAAAGYNQHGTPTSSAAMIMNQSVAHIAHAHSHSQQM
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcattaaatgtggatcaccatgcaccgccacagactgagttaaaaccccagcctcta
tccagtccacagcctatcgtttctacaccgggcttaccaaccccggcccatcaaccactt
ggacatgtcggaattccaatgtctcatgcccacatgacccactcgcattcgccgacagtg
agtaagaatgcacaaaaccagcaagatcgggtgaaacgtcccatgaatgcgttcatggtc
tggtccagaggtaagagacggcagatggcacaggaaaatcccaaaatgcacaattctgag
ataagtaaacggttgggagaggagtggaaacatttgacggacgaccaaaagaaacctttc
attgacgaggcaaagagattgcgagcagttcacatgaaggagcatccagattacaaatat
aggccaagacgtaagaccaagaccttaatgaaaaaggacaaatatgctatcccaggtatg
ttaccacccggtgcagacatgcagagaactgttggtgacggtatgcagcattacccacca
agtattaatggctacatgaatggttatccgatgatgcaagaacaactttcccatttacaa
ccacattttggcgcaggagctcaaatgggcggcaactctggacttcaccccaggtacgaa
atgggtcagctatatgcccccatgacatcggcacatcatgcttatctgaaccctgctgca
gggtacggtcactacagtagtcaagcagtaccaatgcatgttcccactggaagcgcagtg
cccaaatctgagcaaagttcgtcccccaccggttccgctgcagatcgtgcccaccaccca
cagggtatccccaccaggatgcatacagctgatataaaagacatgataaacgtatactta
ccaggggatgtagcgaacgaccccaacgcggccagtcggcaccatgcgttacaagtagcg
gcagcgggttacaaccaacatggtacaccgacatcatcggcagccatgataatgaaccag
tcggtggctcatatcgcccacgctcactctcactctcaacaaatgtga
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