Apostichopus japonicus (Japanese sea cucumber): 139975153
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Entry
139975153 CDS
T10891
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
Enzymes [BR:
ajj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139975153
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
139975153
mRNA cycle factors
Common to processing body (P body) and stress granule
139975153
Spliceosome [BR:
ajj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
139975153
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
139975153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139975153
NCBI-ProteinID:
XP_071838904
LinkDB
All DBs
Position
10:complement(4741871..4765899)
Genome browser
AA seq
751 aa
AA seq
DB search
MSNGASPNGPSLERQFAGLDLNVDGGRKPQQDGQGPPQGQGRKAYVPPHLRDSPGGGGGG
GRGGFQGPPPPQGGGYGSYPRNDFGGFPPQQGNYGGSFNRGPVPNFSGNFAGPGPSPPQG
GYGGRGGYSNDYPRGNYSGGFNQGGYQQGGRSGFNPSGGYNQGYNNRDYGNDQGSWGGRP
QGNYANNYQRGGGGYQRGGDNKFYGRGGGGGGGGEFWSRGGARDDGFRGTAEDFVAEKEE
DWTKPLPRNERMEKDLFSAQNTGINFDKYEDIPVEASGEDCPKHIQEFSDINLGEIINNN
IALSSYTRPTPVQKYAIPIIKGNRDVMACAQTGSGKTAAFLLPILSQIFEGGPWKNSVGG
YKKKQYPLALVIAPTRELASQIYDESRKFAYRSRVRPCVVYGGADVGNQIRDLERGCHLL
VATPGRLVDMLERGKVGMDHIKFCVLDEADRMLDMGFEPQIRRIVEQDTMPKVGKRQTLM
FSATFPKEIQILARDFLERYIFLAVGRVGSTSANITQKVVWVAEDDKRDFLLDLLHAAKK
GSLTLVFVETKKGADSLEDYLYREGFQVTSIHGDRSQSQREEALHAFRDGRTPVLVATAV
AARGLDIPNVKHVINFDLPTDIEEYVHRIGRTGRVGNLGLATSFFNDKNRNLARDLFEKM
LETKMELPPWLEGIAYDSQRNSGQPRRKNQNRSGNFGGGFGSRDYRQQNRPPRTGPMVGF
GNQGQTVPFGGYHPMGNQYGGSYGNNDWWGK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatggagcaagtccgaatgggccgagtctagaacgacagttcgctggtctcgac
ttgaatgttgatggaggcaggaagcctcagcaggacggtcaaggtcccccacaagggcaa
gggagaaaagcatatgtgccaccccaccttcgtgacagcccaggaggaggaggaggagga
ggtagaggtggtttccagggaccccctccaccccaagggggtggatatggtagctaccct
cgcaatgactttggtggttttcctcctcagcagggcaattatggtggctcatttaacagg
ggaccggttccgaattttagtggaaactttgctggtcctggtcccagtcccccgcaaggt
ggctatggaggcagaggaggctacagcaacgactacccccggggtaactattcaggtgga
ttcaaccaggggggataccagcagggcggtcgctcgggttttaaccccagtggtggctac
aaccagggttacaacaacagagactatgggaacgaccaaggcagctggggagggcgacct
cagggtaactatgccaacaactaccaacgaggtggtgggggctaccaacgtggaggagac
aacaagttctatggacgtggtggaggaggaggaggtggtggtgaattctggtctcgtggc
ggtgctagggatgacggattcagagggaccgcagaagactttgttgcagagaaggaggaa
gattggactaagccattaccaaggaatgagaggatggaaaaagacctgttttccgctcag
aataccggtatcaactttgacaagtatgaagacattcctgtagaggcttctggtgaagac
tgccctaagcacatccaagagttcagtgacattaacctcggcgagatcatcaataacaac
attgcgctgagctcttacacccgacctaccccggtacagaagtatgccatccccattatc
aagggaaatagggatgttatggcatgtgcacagacaggatctggaaagactgctgctttc
cttttgccaatcctgtcccaaattttcgaaggaggaccttggaaaaactctgtgggaggc
tacaagaagaagcagtatccattggccctggtgattgctccaactcgagaattggcttct
cagatctacgatgaatccaggaagttcgcttaccgatctcgggtaagaccttgcgttgtg
tacggtggtgccgacgtgggtaaccagattcgagacttggaacgaggatgccatctgttg
gtggccaccccaggacgactggtcgatatgctggaaagaggcaaagttggaatggatcac
atcaaattctgtgtcctggatgaggccgatcgtatgcttgacatgggatttgagccccag
attcgacgaatcgttgagcaagatactatgcctaaagttggcaaacgacaaactctcatg
ttcagcgccactttccccaaagagatccagatcctcgctcgcgatttcctggaacgttac
atcttcttggcggtcggccgcgtcggaagtaccagtgcgaacatcactcagaaggtggtc
tgggtagcggaggatgacaaacgagattttctcttggatctgttgcatgctgctaagaaa
ggatccctcactctcgtctttgtggagactaagaagggtgccgattccttggaggattat
ctctaccgagagggcttccaggttacaagtatccatggcgaccgtagccaaagtcaacgt
gaggaggccttgcatgcattccgtgatggacgaaccccagtcttggtggccactgcagtg
gctgctcgaggtttggatatccctaacgtgaaacacgtcatcaactttgacctccctacg
gacattgaggagtacgtccatcgtatcggccgtacaggaagagtcggtaacttgggtttg
gcgacctcgttcttcaacgacaagaaccgtaaccttgcccgggatctgtttgagaagatg
ctggaaaccaaaatggagcttcctccgtggttggaaggtatcgcttacgactcacagcga
aacagcggacagccccgcaggaagaaccagaacaggtcagggaactttggaggaggattt
ggttcacgtgattaccgacaacagaatcgtccacctcgaactggaccaatggttggattt
ggaaaccaaggacagacggttccctttgggggttaccatcccatgggtaaccagtatggc
ggtagctatggcaacaatgactggtggggcaagtag
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