Apostichopus japonicus (Japanese sea cucumber): 139975180
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Entry
139975180 CDS
T10891
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139975180
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ajj01002
]
139975180
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ajj04121
]
139975180
03036 Chromosome and associated proteins [BR:
ajj03036
]
139975180
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139975180
Peptidases and inhibitors [BR:
ajj01002
]
Metallo peptidases
Family M67
139975180
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
139975180
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
139975180
BRISC complex
139975180
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
139975180
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
139975180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
139975180
NCBI-ProteinID:
XP_071838965
LinkDB
All DBs
Position
10:complement(4887822..4895029)
Genome browser
AA seq
264 aa
AA seq
DB search
MAATRVNLTADAYMVCLTHALSTEREEVMGLCIGEIDTDKVVHIVSVIILRRSDKRKDRV
EISPEQLSFAASEGERLAALLKRPLRVVGWYHSHPHITVWPSHVDVQTQSSYQLLDECFV
GLIFSCFNEDKASRQGQIQVTCFQSINQSPEGEAPMYERVEIPLEVMQCDSISPSCMDAL
VQLPKILSQEEQEAYENAIRAGNGDLLNNIHNGAVYTKAICHLLEVMSGSLLQALEQRLN
RNEDIIERLVAERERLMKQLEPTS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaacaagagtaaatttaacagctgatgcctacatggtttgcctgacccacgct
ttgtcaacagaacgagaagaagtcatgggtctttgtattggagagatagacacggataaa
gttgttcatattgtttctgttattattctgcggagatcagataaaaggaaggacagggta
gaaatatcacctgagcaactatcatttgcagcttctgaaggagaaagattagctgcactg
ttgaagagaccacttagagttgtcggttggtaccattctcatccacacattacagtttgg
ccatcacatgtagacgtacagactcaatcctcctaccaactcctagacgaatgttttgtc
ggtttgatattttcgtgttttaacgaagacaaggcgagccggcagggccaaatacaggtg
acttgtttccagtccattaaccagagtcctgaaggggaggctccaatgtatgaaagggta
gagatacccctggaagttatgcaatgcgattccatcagcccatcttgcatggatgccttg
gtgcagctgcccaagattttatcacaagaggagcaggaggcatacgagaacgcaatccga
gcagggaacggagacttgctcaataacattcacaacggtgcagtgtatacaaaggcaata
tgtcatctattggaagtgatgagtggatctctcttacaagccttggagcagagactaaac
agaaacgaggacattattgagaggttggtggcagagagagaaagactaatgaagcagttg
gaacctacatcatga
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