Apostichopus japonicus (Japanese sea cucumber): 139975212
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Entry
139975212 CDS
T10891
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139975212
Enzymes [BR:
ajj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
139975212
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
139975212
Prokaryotic type
139975212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-GeneID:
139975212
NCBI-ProteinID:
XP_071839043
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All DBs
Position
10:2894685..2907666
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AA seq
509 aa
AA seq
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MADTDKGQKRQAEADNGTTEEKKLKADTEQASESLLSKVTHFREECAASIADFNFNKKRV
KVVSDVKDMPEENEGILYWMMRDQRVQDNWAMLYAQRLALKQEVPLHVCFCLDPSNLLPL
RHHSFMLNGLKEVEQELSKLDISFHLLIGETAETIAKFVGEKKIGGLVADFSPLRKPQEW
VQDVAKAIPKNIPFCQVDAHNIIPCWVTSEKLEYAARTIRPKVHKQLGSFLTEYPPVTVH
PHKATTKHEAVNWDEPMNDQKVDRSITEVDWATPGSTAAFDMLESFVRDRLKVFATERND
PTKEALSNISPWLHFGQIAAQRCVLVVKQFKNKYKDSVDSYTEELVVRRELAENFCFYNE
KYDSIEGTNEWAKKTLEVHAGDERKYIYTQEQFEEGKTHEDLWNAAQTQLVQEGKMHGFL
RMYWAKKILEWSKSPQEALNIAIHLNDKYSLDGRDPNGYTGCMWSICGIHDQGWAERDVF
GKVRYMNYEGCKRKFDVDLFVRRYKAKMN
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacagacaaaggccagaagagacaggcagaggctgacaatggaacaactgag
gagaaaaaattaaaagcagatacagaacaggccagtgagtcccttttgtcaaaagttact
catttcagagaggagtgtgcagcgtccattgcagacttcaacttcaataaaaagagagtg
aaggttgtatctgatgtcaaagatatgccagaggaaaacgagggcatcctttactggatg
atgcgtgaccagagagttcaggataactgggcaatgttgtatgcccaaagactggcactg
aaacaagaagttcctcttcatgtctgtttttgtctggacccatctaaccttcttccgctg
cgtcatcacagtttcatgctgaatggcctcaaagaggtggaacaggaactgagcaagctg
gacatctccttccatcttttgattggagaaactgcagagacaattgccaagtttgttgga
gagaagaaaattggagggctcgtggcagatttcagtccattgaggaaaccccaagaatgg
gtccaagatgtggccaaagcaataccaaagaatatccctttctgtcaggtggatgcgcat
aacattattccctgttgggtcacttcagagaaactagagtatgctgctagaaccatcaga
ccaaaggtacacaagcaacttggatcgttcctgacagaatacccaccagtcactgttcat
ccgcacaaagcaacgacaaagcatgaggcggtgaattgggatgagcccatgaatgatcag
aaggtggaccgttccattacagaggtagattgggcaacccctggttccactgcagccttc
gacatgctagaatctttcgtgagggacagactgaaagtatttgccaccgagaggaatgac
cctacaaaagaagccttgagtaatatctcaccttggcttcatttcggtcaaatcgctgca
caacgatgtgtattggtggttaaacaattcaagaataagtacaaggattctgtcgatagt
tacactgaagagctggtcgttcgaagggaactggcggagaatttctgtttctacaacgaa
aagtatgactccattgaaggaacaaacgaatgggctaagaaaactcttgaggtacacgca
ggtgacgaaaggaagtacatctacacacaagaacagtttgaagaagggaaaactcacgaa
gacctctggaatgctgcgcagactcaactagtacaagaaggtaagatgcacggattcttg
aggatgtactgggccaagaagatcctagaatggagcaagtcaccccaagaggctctgaat
atcgcaattcatctcaatgacaagtacagcttggatggtcgtgatcctaatgggtacacc
ggttgtatgtggtctatttgtggaatccatgaccaaggctgggcggagagagacgtcttt
gggaaggttcgttacatgaactacgaaggatgcaagagaaagtttgacgtggatttattt
gtgaggcgatacaaagcaaagatgaattag
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