Apostichopus japonicus (Japanese sea cucumber): 139975223
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Entry
139975223 CDS
T10891
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ajj03000
]
139975223
Transcription factors [BR:
ajj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
139975223
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
139975223
NCBI-ProteinID:
XP_071839058
LinkDB
All DBs
Position
10:14303077..14308819
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AA seq
270 aa
AA seq
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MSADNYGAKQQEHVKRPMNAFMVWSRGKRRQMAQENPKMHNSEISKRLGEEWKLLTEDQK
RPFIDEAKRLRALHMKEHPDYKYRPRRKPKSLMKKDRGYPYPIPYVPASPPFHHPPTSAS
EILNLSHSERPRALLPPSFTQPFANPYAVLDGAMASSKLETPRSLSLSDFPATSLYQSYS
ASHPYSASAAASSAAFGKIPLGAGLHSSLPAQYMMPYPWTTATSQDGIQRPVAFILVKPD
MEPYGGVHPAVRPSMPLPSRSSHAAAAALT
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgataactacggcgcgaagcaacaggagcacgtgaagaggcccatgaacgct
ttcatggtttggtctcgtggcaagagaagacagatggcccaggaaaatcccaagatgcac
aactctgaaataagcaaacgactgggtgaagaatggaaacttctgacggaggaccaaaaa
cggcctttcatagacgaagcgaaacgactgagggctctgcatatgaaggagcaccccgat
tacaaatacagacctcggcgtaaaccaaagtcgctgatgaagaaagaccgtggttatcct
taccctataccatacgtaccagcttcaccccctttccaccacccaccaacatcagcttca
gaaatcttaaacttgagccatagtgagagaccccgggctctcctaccgcccagtttcact
cagccatttgcgaacccttacgctgttttggatggtgccatggcctcgtccaagttagaa
accccgaggtcgctgagtttatcggactttccagctacctccctgtaccagtcgtactct
gcttcgcatccatattccgcctcggcagcggcgagttccgccgcatttggtaagattccc
ctcggagctggactacactcgagtttaccggcccagtatatgatgccgtatccctggacc
accgctacatcgcaggacggtatacagaggcctgtagcgtttatcttagtcaagccggac
atggaaccatacggcggtgttcacccggcagttagacctagcatgccgttaccgtcaagg
tcttcacacgccgccgccgcggcattgacttga
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