Apostichopus japonicus (Japanese sea cucumber): 139975228
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Entry
139975228 CDS
T10891
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
ajj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139975228
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
HECT type E3
139975228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139975228
NCBI-ProteinID:
XP_071839070
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Position
10:complement(9149319..9222035)
Genome browser
AA seq
2055 aa
AA seq
DB search
MADQNPSFNQPGGSQRRMRQGATSGSSVSSHLSQDKTSATNNKRKKQKSGLKRKSTPETS
SIPEKVKKGSKTVISDLTFSSQSSSKELKVAIEKVHRTPKDSQQTSVSHSRSLPTFQTNL
PGPSKHLSSASKLELKRGKQSKRRKQEEEAEEEETEINITPNSLRSYSRTHPYRFQSIDY
YAPRRLSKGGISVVFETSPGRVSIPESQSLPSVSSLGGSKTEEKGNSDISKSSKGLKHSS
GSDTSVKGEAPTTSGVQTRRQSEPTSSSGKSKRKASAGTSPASSKGKSSTSKGKGRTTAR
TTGASTSSQAASTNSTTGTCASTRSRRGSGMSKRGPGKGGRQDGMSNQDTTTESSASNAN
ESNEETSQGATAASNTSGAASALATGGEGESDDSEVSRLQALLEARGIPPHLFNALGPRM
QHILNSRMGTGASTKAQQLLTGLQATGDESQQLQAVIEMCQLLVMGNEDTLGGFPVKQVV
PALITLLSMEHNFDMMNQACRALTYMMEALPRSSSVVSSAIPVFLEKLQVIQCMDVAEQS
LTALEMLSRRHSKAILQAGGLSACLLYIEFFSIVAQRNALAVAANCCQSISPDEFRRVSD
SLQLLTGRLQHSDKKSVESCCLCFARLVDNFQNDKNLLKQVASHGLNANLQQLLVITPPV
ISTGTFIMVIRMMALMCSRCPELAVELIKQNIAETISYLLMGSPDQASQEIELVPRSPQE
LYEITSLISELMPRLPTDGIFAVDALLKRGTIQSTDAAIWQWKDDGGIWRPYSQIDNRIL
EAAHQAGEDEVTLSTLSRTYTIDYNAMQQINEDTGNARPVQRKPNPAAGTNASGAAQEIT
EDARLALLNENQDLSASFIKALFAVLYEVYSSSAGPAVKHKCLKSLLRMVYFAKPDLLRE
VLQNLAVSSHIAAMMSSQDLKVVVGALQMAEILMQKLPDIFHVFFRREGVMHQVKLLAEA
PIEADKTPPTKRSTTSGSNAATSFQTPPQDSNDVEVGLNSDGVPQGRLSDPLKLKRPPKR
VSGRKSRQSNLEEASQSHDLTDTPTGRPLSGSSSLTSGSSRASSSSSRGSAAAKNKGTPA
SKSNSNSSRTSFLASLSLSRWGKSQNASLANPGSSPSSQGGGLLGLRPGHLPDRSLELAK
REATNNAQKEKVKKWIKDQAVKFISQYFDKEVSSESHPALTLLNKLCASVDELKPEGESN
IEILRGIAAILTGSDVSAFEILHSGLVGKLLTFLVSGSGKNREKRLQHFLHVFLKCPLPD
GPPMIQLDISQTPPYVSLVSKVNGCISHLEQFPVKVHDLPGVEGTGSRGSQALKFFNTHQ
LKCQLERHPACSNLRKWRGGAVKIDPLALVQAIERYLVIRGYGRIRQDDEDSEEDVSDDD
IDETLAAAFASSNTNIKHKLQFFIGDHLLPYNMTVYQAIKQFGGSSGASASSEDDRDTDD
ESNPLGRAGLWVKTHTIWYRPAQESKQSSPGASSSTSVSSKKGKQGGGSKAAGKGRKHDE
LWIDGVCPQSDSLLEPYLSSSLPCLKNIVDPSLEAVTLLRTLHGLNRHWNSLYSDVAPQP
ATNSSEFINSKLTAKTNRQLQDPLVIMTGNLPSWLNAIAISCPFLLPFETRQMLFYGTAF
DRDRAMQRLQDSNPELGASDTSERVAPRLDKRKRTVSRTEILKQAESVMEDLAGSRAILE
VQYDSEVGTGLGPTLEFYALVSKELQRSDLDLWRGEAAPISEPKDGGSGKRYIHTHNGLF
PAPLGRNAKSSAVSKVKTKFKFLGRFMAKALMDSRMLDIPLSLPFYKWLLGQEKMLTSFD
LRFIDPTLSQSFHQLKSLVIKKERLAKDKDMSAADLQEAFENLTMDGSSVEDLGLDFTLP
GYPSIELKKGGKDECVTIHNLQDYLQLVVHWTFVEGVSRQFESFKDGFESVFPLAHLQSF
YPEELDNLFCGDNSEPWDIKILLECCRPDHGYTHDSPAVKFLYDVLSSYKADEQRMFLQF
VTGSPKLPVGGFRSLSPPLTIVRKSCEANESPDNFLPSVMTCVNYLKLPDYSTREIMETK
LRLAAMEGQQSFHLS
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccagaaccctagctttaatcaacctggggggtcgcagcgccgcatgagacaa
ggtgccacatctgggtcgtctgtctcgtcacacttgtcacaggacaaaacttcagccaca
aataacaaaaggaaaaagcaaaagtccggattaaagaggaaatccactccagaaacaagt
tccattccagaaaaggtcaaaaagggaagtaaaactgttatatctgatctgacattttcc
tctcaatcctcaagcaaagagttgaaagtagcaattgagaaagttcatcgcaccccaaaa
gactcacagcagacgtcagtctcccatagtaggtcattgcctaccttccaaacaaactta
cctggaccctcaaaacacttatcctctgcctcaaagcttgaactgaaacgaggcaagcag
tccaagaggaggaaacaagaggaggaggccgaagaagaggaaactgagataaacattacc
ccaaactctctcagatcttactcgaggactcacccgtaccgctttcagtctatcgattac
tacgctcctcggcgtttatccaaaggagggatcagcgtcgtgtttgagacttctcccggt
agagtctcgattcccgaaagccaatctctaccctctgtatccagtctgggtggttcaaag
acggaagaaaagggaaacagtgatatatcaaagtccagcaaaggcctcaaacacagctcg
ggatcagatacaagcgttaaaggtgaggcgccaacgacctccggagttcaaaccaggagg
cagagtgaaccgactagtagctccggtaaaagcaaacggaaagcgagtgccggcaccagc
cctgctagttccaaaggaaagagcagtacttctaaaggaaaagggcgaacaacagcaaga
acaacgggcgcctcaacttcaagccaggctgcgagcacaaattccacgacgggaacctgt
gccagcacaaggagtcggcgtggctctggcatgagcaagagagggccgggaaagggaggc
cgacaggacgggatgtctaaccaggacactaccacagagagtagtgccagcaatgcaaac
gagtccaacgaggagacatcacaaggagccacagcagcatccaatacttctggagcagcc
tcggcactagctactggaggagaaggtgaaagtgacgactctgaagtcagcagacttcaa
gctttattggaagcaagaggcataccgccacacctcttcaacgccctcggtcctcgcatg
cagcacatccttaacagcagaatgggaaccggagcaagtaccaaggcccagcagctgttg
acgggacttcaggccacgggagatgagagtcaacagttacaggctgtcatagagatgtgt
caactcttggtcatgggtaacgaggacaccctaggaggattcccagtcaagcaggtggta
cctgcattgataactctgctctccatggagcacaattttgacatgatgaaccaagcttgt
cgcgcactcacttacatgatggaagcgttaccaaggtcatcgtcggtggtctctagtgca
attccagtctttcttgaaaagcttcaagttatacagtgcatggacgttgccgaacagtcc
ctgaccgctctggagatgctgtctcggagacacagcaaggcgattcttcaagctggagga
ttatcagcctgcctactatatattgaattcttctccattgtggcgcaacgcaatgcccta
gcggtggcagcaaactgttgccagagtatcagtccagatgagttccgtagagtgtccgac
tctctccagctgctgacaggaagactacagcactcggacaagaaatcagtggagagctgc
tgtctgtgtttcgctcgattggtggacaactttcagaacgacaagaacttactgaagcag
gtagcatcacatggcttgaatgccaatcttcaacaattgttggtgattacccctccggtt
ataagcacagggacattcatcatggtgatacgcatgatggcgctcatgtgctccagatgt
ccagagttggctgtggaacttatcaaacaaaatattgcagagaccattagctaccttctg
atgggaagccctgatcaagccagtcaagaaatagagcttgtcccaagaagcccacaggaa
ctttacgaaataacatctttgataagtgaactgatgcctcgtcttccaaccgatggtata
tttgcggtagatgcgctcctgaagagaggaaccattcagagtacagatgcggctatttgg
cagtggaaggacgacgggggcatatggaggccgtatagtcaaattgataacagaatttta
gaggctgctcaccaagcgggagaagacgaagtgaccctctccacccttagccgaacttac
accatagactacaatgccatgcaacagataaatgaagacacgggtaacgccaggccagtt
cagaggaaacccaatcctgctgcagggactaatgcatctggtgcagcacaagagataaca
gaggatgccagactagcactcctgaatgagaatcaagatttgtcagcatctttcatcaaa
gctctctttgctgttctctatgaagtctacagttcttcagcgggaccagctgtgaagcac
aagtgtttaaaatcactgttgaggatggtgtattttgcaaaaccagacctactcagagaa
gttctacaaaatttagctgtttcaagtcatatagcagctatgatgtcatctcaggacctg
aaggtagtggttggagccctacagatggctgagatcctcatgcagaaactgcccgatata
ttccacgtcttcttcagaagagaaggggtaatgcatcaagtgaagttactcgcagaggcc
ccgatagaggcagacaagaccccacccaccaaacgatcgaccaccagcggtagcaatgct
gccacgtcattccagacgccaccccaagatagcaatgatgtggaagtgggtctcaattca
gatggcgtgccacaagggagactgagcgatccactcaaactgaagaggcctccaaagaga
gtctctggtcgcaagagtcgtcagtccaacctggaggaggcaagccagtcacacgacctt
acagacacacccacagggagacctctgtctggttccagttccctcaccagcggatcctca
agagcctcttcgagctcatcgagggggtccgctgcggcaaagaacaaaggtacaccagct
agcaagagcaacagtaatagctccaggacatccttcctagcaagtctgagtttgtcacgt
tggggaaaatcccagaatgcatcacttgccaacccgggatcgtccccgtcgtcgcagggc
ggtggcctgctgggtctccgaccgggccacctgccagacagatccctagagttagcaaaa
cgtgaggcgactaataacgcccagaaagagaaggtcaagaagtggatcaaggatcaagct
gtgaagttcatcagccagtactttgacaaagaggtctcttccgagagccatccagcttta
acccttctgaataaactttgtgcttctgtggatgagctcaaaccagagggtgaatccaat
atagagatactaagaggtatagcagccatcctcacaggttcagacgtctcagcatttgag
attcttcacagtggactggtaggcaagctactgacattcctagtcagtggttccggtaaa
aatagggaaaaacgacttcaacattttctccacgttttcttaaaatgtcctttgccagac
ggccctccaatgatacagcttgatatttcccagacccctccttacgtgtccctggtgagc
aaggttaatggctgcatcagccatctggagcagtttccagttaaagttcatgacctccct
ggtgtggaggggaccggtagcaggggttcacaagccctcaaattcttcaatacgcatcaa
ctaaagtgccaactagaaagacacccagcttgttccaacttgaggaaatggcgcggaggt
gcggtcaagatcgacccgctggctctggtgcaggccatcgagaggtacctggtgatccga
ggttacggcaggatcaggcaagacgatgaagatagcgaggaagacgtatcagacgatgat
atcgatgaaacattagctgctgcttttgctagttccaataccaacatcaaacacaagcta
cagttcttcatcggagatcatctcttgccttacaacatgacggtttaccaagcgatcaag
cagttcggtggttccagcggtgcttctgcctcctcggaggacgacagggacacagacgac
gagagcaatcctctcggaagggcagggctctgggtcaaaacacatacaatatggtaccga
ccggcacaggagagcaagcagtctagtccaggagcaagttcctctacgtcagtttcatcc
aagaagggcaagcagggtggaggtagcaaggccgcaggcaaaggcaggaaacacgatgaa
ctctggattgatggtgtttgtcctcagtctgattccctcctggagccttatctttcatcg
tcactgccttgtctgaagaacatagtagacccgtctctggaagcagtcactctcttacgg
acattgcatggactcaacagacattggaactctctctattctgatgtggctcctcaacca
gcaaccaacagcagcgagttcatcaacagcaaactgacggccaagacgaaccgccagcta
caagacccgctggtgatcatgaccggtaacttaccatcctggctaaatgcaatcgctatc
tcatgcccattcctgctacctttcgaaacccgccagatgttgttctacgggacagctttt
gaccgtgacagagccatgcagagactgcaagacagtaatccagaattaggggcatcagac
accagtgaacgggtagcaccaaggcttgacaaacggaagagaacggtttcaagaactgaa
attttgaaacaagccgagtcagtaatggaagaccttgcaggttctagagctattctcgag
gtgcagtacgacagtgaggtagggaccgggttaggccctactctggagttttacgctctc
gtctccaaggagctgcagaggagcgacctggacctctggagaggagaagctgccccaata
tcagagccaaaagatggaggttcgggcaagaggtacatacacactcacaatggattattc
ccagccccgctagggaggaatgccaaatcatctgctgtgtcaaaggtcaagacaaaattc
aaatttttaggtcgtttcatggcgaaagctcttatggactccagaatgttggatattcct
ctgagtttaccattctacaagtggctgctgggccaggagaagatgttgacatcctttgat
ctgcgttttatagacccaactctttcacagtccttccatcagctgaaatctctcgtcatc
aagaaagagagactggctaaagacaaagatatgtcggcagcagacttgcaggaagccttt
gaaaatcttacaatggatggcagttctgttgaagacctcggtctagattttaccctccca
ggatacccctccatagaacttaaaaagggtggcaaagacgaatgtgtcaccatccacaac
ctccaggattatcttcagttggtagttcattggacttttgtggaaggtgtttccaggcag
tttgaatcattcaaagatggctttgagtcagtattcccattagcacatttgcagagcttc
tatccagaggagcttgataacttattttgtggtgacaatagtgaaccttgggacatcaag
atactgttagaatgctgcagaccagatcatggctacacacatgacagtccagctgtgaag
ttcctctatgacgtactttcatcatacaaggctgacgaacagagaatgttcctgcagttt
gtgactggaagtccaaaattacccgttggcggcttccgatccctcagtccaccgttgacc
atcgtcagaaagtcgtgcgaagcgaacgaatccccagacaatttcctgccatccgtcatg
acctgtgtgaactatctgaaacttccagattatagtacaagagagataatggaaactaaa
ctgagactagcagctatggagggccagcaatcattccatctgtcatag
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integrated database retrieval system
