Apostichopus japonicus (Japanese sea cucumber): 139975782
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Entry
139975782 CDS
T10891
Name
(RefSeq) E3 ubiquitin-protein ligase MIB2-like isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ajj04121
]
139975782
Enzymes [BR:
ajj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139975782
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139975782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIB_HERC2
Ank_2
Ank
SH3_15
Ank_4
Ank_5
Ank_3
zf-C3HC4_3
Ank_KRIT1
ZZ
Motif
Other DBs
NCBI-GeneID:
139975782
NCBI-ProteinID:
XP_071840048
LinkDB
All DBs
Position
11:complement(3507715..3547002)
Genome browser
AA seq
1008 aa
AA seq
DB search
MESTVVGYRVVRGPDWRWNDQDGGEGNLGTVVEVGKKGSSTSPEKTVIVQWDNGSRTNYR
MGYHNAYDLLIYDNATVGIQHVNILCDACNKQGFMGMRYNCTQCQDFDLCASCYHSDKHD
LSHHFLLYITPSSVGVKLPPRSSAIKIGYRGLVPGAKVMRGPDWDWGNQDGGDGKIGRIK
DIRGWDSESDRSVANVQWSNGNTNVYRVGHKGKVDLRCLDSVKGGTYYKDHLWKLGQKVA
KNSVSAYGKKWSFVHGEKVKVNLDVAVLKIMQGDHGGWNAKMEEYVGQEGYVHRITEKGD
IRVQYSDGIKWTFHPGALTKVTTFSVDDNVRITSDIEKLRKLQLGHGEWHEDMKMALGKV
GRVIKIYKDGDLRVCVNGQSWTYHCECVTAVESSQDVNVTVAAEASSSQQQQQDPSGNVQ
RLKDRIRVLRKGEDCLDKLVTAAARGDVSVVGDLVLKRPGWVNEPSSNKTALQVAAHQGH
VDVVKILVQAGANLSIADQEGDTALHYAVFGNQPGIVRYLLEHGAEVNLVNKGQCSSLHV
AVNKSYMQCVEELIKKECNVNLQDCCGDTALHDAIAKDNTEAIDILTNIANAEFTLANRR
GFNVLQHAALKGNKRATEKLVRAARQLVNRKKDDGFSALHLASLNGHRDVVEVLLTTGQA
DINIRNNRLQTPIHLAVSQGHVPVVELLVSRGADLLASDEDGDTCLHVALMKPVVSPGGE
NLPVIRGIQATLGVSIRPGVALACFLIQEGADPSYLNTQSKSALDLVKEKRSISALKFFM
EHRRQPGRRIAVPNDTSSHVIEDANITDESDAIQQPQLVMSTSVSTTTCKLCHKMADCCL
KPCKHITCCMECSQLFALCPVCKGTIESREKIETTDQSKCSLCKTNVADVTLLPCRHRAA
CADCFQKMSVCAVCSEPIIEVITAGSAKAVAGVSANSLSKSLSKDKEKISKITTSNDKGR
QMECAICMERESSVVFLCGHTTCGTCAKPLRVCHICRKPITKKVNLFL
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtacagtcgtcggttatcgtgtggtcagaggaccggattggagatggaacgac
caagatggcggagagggtaatcttggcacagtagttgaagtgggcaagaagggcagcagt
acgtcaccggagaagacagtcatcgtacagtgggataatggttcccgaacaaactatcgc
atgggttaccataatgcgtacgacctcctcatatatgacaatgcaacagtcggtattcaa
catgtcaatatcctctgtgatgcctgcaacaagcaaggttttatgggtatgaggtacaat
tgcacccaatgtcaggattttgatctttgtgcatcctgttaccatagcgacaaacatgac
ctctctcatcactttttgctctacatcacacccagttcggttggagtcaaattgccacct
agaagcagtgccatcaagataggctacagaggtctggtccctggagcaaaagttatgcga
gggcctgactgggactggggcaatcaagatggaggtgacggaaagattgggcgaatcaag
gacatcaggggctgggacagcgagtccgatcgtagtgtagctaacgttcagtggtccaac
ggaaatactaacgtgtatcgagtcggtcacaaaggtaaagtcgacctaaggtgtctcgat
tcagtgaagggcggcacctactacaaagatcacctttggaaactgggccaaaaagtcgct
aagaattctgtcagtgcctatggcaagaagtggtcgtttgtccacggtgagaaagtgaag
gtgaacctagacgtggcggtattaaagataatgcaaggagaccatggtggctggaacgct
aaaatggaagagtacgtaggccaagagggatatgttcaccgaataacagagaaaggggat
atcagggtgcagtatagtgatggaatcaagtggacctttcatccaggggcattaacaaag
gtgacaacattctctgttgatgataatgtacgcatcacatctgatattgagaagttgagg
aaattacagctcggccacggcgaatggcacgaggatatgaaaatggctctcggtaaagta
gggagagttatcaagatctataaagatggtgacctgagagtgtgtgtgaatggtcagagc
tggacgtatcactgtgagtgtgtaacagctgttgagtccagtcaagatgtcaatgtcaca
gtagctgcagaggcctcatcatcacaacagcaacagcaggatccatcaggtaacgttcaa
cggctgaaggatagaattcgagtgctcaggaagggagaggactgcctggacaagttggtg
accgctgcggcaagaggggatgtctctgtcgtaggtgacttggtgctaaaacgacctgga
tgggtcaacgagccgagttcaaacaagacggcactgcaggttgcagctcatcagggacat
gtcgacgtggtgaagatcttggtgcaggccggagcgaatttgagcatcgcggatcaagag
ggggacacggctcttcattatgctgtgtttgggaaccagccaggtattgtgcgttacctt
ctagaacacggagcagaggttaacctggtgaacaaaggacagtgtagtagtctgcatgtt
gccgtcaacaagtcttacatgcaatgtgttgaagaactgatcaagaaagaatgtaatgtc
aacctgcaggactgctgtggggacactgccctccacgatgctatcgcaaaggacaatacc
gaggctatcgatatcttaaccaatatagcaaatgctgaattcactctagccaatcggcga
gggtttaacgtcctgcaacatgctgcattgaaaggaaataaacgtgcaacggaaaaactt
gtgagggccgctcgacagctggtgaaccggaagaaagatgacggtttttcagccttacat
ttagcatcacttaatggacatagggatgtagtggaagtgttacttacaacgggccaagca
gatatcaacattcgcaataacagactgcagacccccattcacctagccgtcagccaagga
cacgtaccggttgtcgaacttctggtttcaagaggtgcagacttactggcgtcagatgaa
gatggagatacctgtcttcatgttgctctcatgaagccggttgtctctcctggaggggaa
aatcttccagtcatcagagggatccaagctaccctgggtgtcagtatcaggcctggtgta
gctcttgcgtgtttcttaattcaggaaggagccgatccatcgtacctcaacacacaaagt
aaatcagcgctggacttagtcaaagagaaacgaagcatatccgctctcaagttctttatg
gagcatagaagacaaccgggccgaaggatagccgttccgaatgatactagttcacatgtg
atagaggatgctaacataacagatgaaagtgacgcaatccagcagccacaactagtgatg
tcaacgtctgtatccactaccacctgtaaactctgccataagatggctgattgttgcttg
aagccctgtaaacacattacctgctgtatggaatgctcgcagttatttgctctctgtccc
gtatgtaaaggtactatagaatccagagagaagatagagacaacggaccagagcaagtgt
tctctttgtaaaacgaacgtcgctgatgtcactttgttaccatgtcgccatagagcagcg
tgcgcagactgttttcagaaaatgtctgtgtgtgcagtgtgctcagagcctatcatagaa
gtcatcacagctggttcagccaaagctgtcgctggtgtttcagctaattcactctctaag
agtttgtcaaaggacaaagagaagatctcaaagatcactacttctaatgacaaagggagg
caaatggagtgtgcaatctgcatggagagggagagctctgtggtttttctctgtggtcat
accacctgcgggacatgtgccaaaccactcagggtatgccacatctgccgaaaacccatt
acaaagaaagttaatctatttctgtga
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integrated database retrieval system
