Apostichopus japonicus (Japanese sea cucumber): 139975823
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Entry
139975823 CDS
T10891
Name
(RefSeq) BLOC-2 complex member HPS3-like isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
Membrane trafficking [BR:
ajj04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
139975823
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139975823
NCBI-ProteinID:
XP_071840134
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Position
11:10440571..10465381
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AA seq
1025 aa
AA seq
DB search
MVLELYKMVLVISCHPFSSQRVINPSKEPIKCIISGEWTFLFTIDCGMEIHKLVNSDWCL
QFTIQNEGFVEQAVICRKGNYLASLEKNQFGDFVQVYHDLLDDSRNVSDEPENWRYKLSL
DFTPTCIDCCSLSGSLAVGGNECVSIFKLDSEEMTGRATLKASMNIHVSYLNIQLLNIQQ
NFLAVSSTKEMHVLYVPNMNIRESHRLPKHYREVLEATILPSVAAEEIYYHRKEEIFELH
GPSCFAPRTAVLVQSSDRSESEATERTLHLLYKLLSEKETPFHTLQLSPRYYSQDEGQEA
APSVITMHCLVSNKKEGFLFQLYPCVMLQSRYLYTSPCTSVSLDHQFLFATTDHGLVTYT
HRVHAAFINQLYLTGCIDEDGPDPMHEVCLVSQKPFYGLQSLCTSGNRVLMMSKIREERK
STSSSENSWSVYILDAANPCDIFDDIVDFSLHSNQMNPETYLQGLIEAHFLLRSEVINKM
SLITDEQLKEYFKKSCKLLGEFYAREPNKNHLLTLEYFSLAGITLDEAWRLCFLSRKKSS
SSSQVETVSASRGFLHYLKYAIFSSKMCGQHISQECLSSVLDIFLKYEPMLCSEVIVAPH
LQEKINLKKTDEVLAHLRTQVMHGQQYQWKPLDFIAAITVHLRKGEMEQAMATFDLIYED
ELVNLCCEREHLVVSKTKKLFTYFAEMMSKFPSAIVSILINLTEVRKMSYLEVCDVIEKS
IPEGLGQDMILMQYLEAFITSSSDSCLGFKMVAVEKLLHLYLRHLMLEASSSSSSSSSEV
MKRNPQSTLRTGGKQAKRSSRHSWLDKLPPFEGDDVKICTKLVETKNIHMKLRGLWRFSA
GKSPQMDSSTVKQCHCLQCHSKLVKIQDLLCMEISRDINIHEAMEICLQLPDEKGKLSLQ
LLCLALTSPLEAVRIILDKSPSILGDFCVCAIREGDLESWKLILQEIKRKENDTRGKDIK
IYQQYTNDLLNHLASKLSPLDFKKVLPEDVSSEFSAPFLAKLIEEDKLQSLKEDIVASLE
NLVNP
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagagctctacaagatggtactcgttatatcttgccatcctttttcatctcag
agggtgataaatccctccaaggaaccaatcaaatgcatcatctctggagaatggaccttt
ctttttacgattgattgcgggatggaaattcataaattagtgaattcagattggtgcctc
caattcactattcaaaatgaaggatttgtagagcaagctgtgatttgtaggaaaggaaat
tatcttgcatctttggaaaagaaccaatttggggactttgttcaagtttaccacgacctt
ttagatgactcaagaaatgtttctgacgaacctgaaaattggagatataagctgtcacta
gacttcacaccaacctgcatcgattgctgctcactctcggggagtctggctgtcggagga
aatgaatgtgtcagcatcttcaaactcgattcagaagaaatgacaggaagggcaacgttg
aaagcgtcgatgaatattcatgtttcatacttaaatatacagctactgaatattcaacag
aactttctcgcagtctcgtccaccaaggaaatgcatgtgctgtacgttccgaatatgaac
attcgcgagtcgcatcgattgccgaaacattaccgagaggttttggaggcaaccattctc
ccatcagtggctgcagaagaaatatattatcatagaaaagaggaaatatttgagttacat
gggccatcatgttttgcacccagaacagcagtcttggtacaaagcagtgatagaagtgaa
tctgaagctacagagaggacccttcacttactctataaacttctgtctgagaaagaaact
ccatttcatactttacaactcagtccaaggtactattcccaagatgaaggtcaagaggca
gctccatcagtaataacaatgcactgtctggtcagtaataaaaaagaaggttttctattc
caattgtacccctgtgtgatgcttcaatccaggtacctctacacctccccctgtacctct
gttagtttggaccaccagttcctctttgctaccaccgatcatgggttggttacctataca
caccgtgtccatgcagctttcatcaatcagctttatctaacaggatgtattgacgaggat
ggccctgatccgatgcacgaagtttgcctcgtaagtcaaaagccattttacggtttgcag
agtctgtgcacgtcgggaaacagggtacttatgatgtcaaagatcagggaagagaggaaa
tccacgagttcttcggaaaattcatggagtgtttacattctggatgcggccaatccctgt
gacatctttgatgatattgtggactttagtctccatagcaaccagatgaatccagagacc
tatttacaaggtctaatagaagcccacttcctcttgaggtcggaggtcatcaataagatg
tcattaattactgatgaacagctgaaggagtatttcaaaaagtcatgtaaactactgggg
gaattttatgcaagagaaccaaacaaaaaccacttgttaacccttgagtattttagcctg
gctggaataactctcgacgaggcttggagattgtgttttttatccaggaagaaatcgtct
tcttcttctcaagtagaaacagtcagtgctagtagagggttcctacactatctcaaatat
gccatcttcagctcaaagatgtgtgggcaacatattagccaggaatgtctctcgtctgtg
ctcgacattttcctgaagtacgaacctatgctgtgctctgaagtcatcgttgctcctcat
cttcaagaaaagatcaacctgaagaaaacagatgaagtgctagctcatctgaggacacaa
gtcatgcatggacaacagtatcagtggaagccattagatttcattgctgctatcactgtg
cacctgaggaaaggggagatggaacaagcaatggcgacctttgaccttatctatgaagat
gaacttgtcaacctttgctgtgagagggaacatctggtggtgagcaagaccaagaaactg
ttcacatactttgctgaaatgatgtctaagtttccatctgctatcgtgtctatcctgatt
aatttgaccgaagtcaggaaaatgagctacttagaggtctgtgatgttatagagaagagc
atccccgagggtctcggacaagatatgatcttaatgcagtatttagaagctttcatcacc
agttcgtcagattcttgccttggtttcaagatggttgctgtggagaaacttctccatctt
tacctgagacatctgatgttggaggcatcatcatcatcctcatcctcatcctcagaagtc
atgaagaggaatcctcaaagtacattgaggacgggtgggaaacaagcaaagagaagttca
agacactcgtggctggacaaactgcctccgttcgaaggtgacgatgttaaaatttgtacc
aaactagtagaaactaaaaatattcacatgaagttgagaggcctgtggcgtttctctgcc
gggaaatcaccacaaatggattcttcgaccgttaaacaatgtcattgtcttcagtgccat
tctaaacttgtcaaaatccaagacctcttatgcatggaaatcagcagagatataaatatt
catgaagccatggagatatgccttcagcttccagacgagaagggtaaactgtccttacag
ttgctgtgtctggctctcacttcccctctggaagctgtcagaataattctcgataagtcg
ccatccatcttgggtgatttctgtgtttgtgcaatcagagagggtgacttagaatcgtgg
aaactgattctacaggaaataaagaggaaggagaatgatacaagagggaaagatatcaaa
atataccaacagtatacaaatgatctcttaaatcatctggccagtaaactttcacctttg
gactttaagaaagttcttcctgaagatgtttcatccgaattttctgctccttttctggcc
aaacttatcgaggaggataagctgcaaagtctaaaggaggatattgtcgcatctttagaa
aatcttgtaaatccgtga
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