KEGG   Apostichopus japonicus (Japanese sea cucumber): 139975908
Entry
139975908         CDS       T10891                                 
Name
(RefSeq) WD repeat-containing protein 18-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:ajj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ajj03009]
    139975908
Ribosome biogenesis [BR:ajj03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    139975908
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 WD40_MABP1-WDR62_1st WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_SPT8 WDR54 WDR90_beta-prop_4th Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 139975908
NCBI-ProteinID: XP_071840300
LinkDB
Position
2:5768470..5783432
AA seq 437 aa
MCKTDFSRNKMALPYEVVISSDSTGQMWNCCIWNPLSDTTSIHYKGSGSKLRSLCLLSGQ
YIISADSNKPLLNMWEVQRREQHQTRMVCSGHVSCLAASPDSAYCIGGIEEKLNIWQIST
GHLLAVLSRHFQRVTCICFTDDGSYFLSGGEDNLIMVWDLASTLQWEQSQGQDPLHIWSH
HALPITDLHCGKGGITDRVVSASQDQTCKLWDIPSGQMLCSFVFDTPILSVTMDAAQLRI
FAGGLDGSIYSVNLFEKVTGQQRLVEDHENTYKGHSKAVTCLSTSMDGSMLLSGSEDSTA
RIWHITSRQCIRTVLHKGTVTNAMFIMMPRILQIQTGKPTLPVRPFQRHLYVPSTSTVLT
EAVEDEDAVNGTPVRWHHSLQIPEEISWTEAVQSALHEEKPSVTVAERQAEEVASLKHIN
AQLRKFAAENILLEQKT
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgtgtaaaactgatttctcaaggaacaaaatggcgctgccctacgaagttgtgatttca
agtgattctactggtcagatgtggaactgttgtatttggaatcccttatcagataccaca
tcaattcattacaagggaagcggaagcaaacttcgttcgttatgccttctttcaggacaa
tacattatatcggcagacagtaataaaccgttattgaacatgtgggaagttcagcgtagg
gagcagcatcaaactagaatggtttgttcgggacatgtttcatgcttagcagcaagccct
gattcagcatactgcattggtggaattgaagaaaaacttaatatatggcagatctcaaca
ggtcatcttttggcagttttatcacggcactttcagagagtaacatgtatatgcttcact
gatgatggatcatattttctctctggaggggaagacaacctcatcatggtttgggatctt
gcaagcactttacaatgggaacaatctcagggtcaagatcctctgcacatctggtcgcat
catgctttaccgataacagacttgcattgtgggaagggaggaatcactgacagggtggtc
tctgcctctcaggaccagacatgcaagttatgggatataccatcaggccagatgctttgc
tcctttgtatttgatactcccatcctctctgtcactatggatgcagctcagcttagaatt
tttgcaggaggtctagatggaagtatctattctgtcaacctctttgaaaaggttactggt
caacagagactagttgaagatcatgagaatacgtacaagggacacagcaaagctgttaca
tgtttgtcaacctctatggatggttcaatgcttctttccggcagtgaagatagcacagct
agaatatggcacatcaccagcaggcagtgcatcagaacagtacttcataaaggcaccgtc
actaatgctatgttcataatgatgccacgcatcttacaaattcaaactggcaaaccaact
ctccctgtcaggcccttccagcgacatctctatgttccttctacatcaactgttttaact
gaagcagtggaggatgaagatgcagtaaatggtacccctgtcaggtggcatcacagtctc
cagattccagaagagatcagttggacagaagctgtgcaatcagctcttcatgaagagaaa
ccctcggttacagttgcagaaagacaagccgaagaggtggccagtctgaagcacatcaat
gctcaattacgcaagtttgcagctgagaatatcttgcttgaacagaaaacttga

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