Apostichopus japonicus (Japanese sea cucumber): 139976067
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Entry
139976067 CDS
T10891
Name
(RefSeq) RAD50-interacting protein 1-like
KO
K20474
RAD50-interacting protein 1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ajj04131
]
139976067
Membrane trafficking [BR:
ajj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
139976067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Rab5-bind
FadA
Motif
Other DBs
NCBI-GeneID:
139976067
NCBI-ProteinID:
XP_071840585
LinkDB
All DBs
Position
11:16347052..16362053
Genome browser
AA seq
782 aa
AA seq
DB search
MAEENLQFTPKIVQHLSQLIDHEFGDDVKALEKVEELLQDAVKRRDKLKTDLNVATAEIP
TEIRKALTEADSSITRIDEITLEYKQVRRGVTGQLTDVEPMVEGLKEMVSKVRVLERSLD
YIKWLMLVEELSSEIQGSLLVTTAPPSLFTSTDVQKSLSANATPSAVSHFSKLSQVYESL
QESKCHHLLEFVESTVMFWYRILMEKLAGEFSEITKALGWPFVTVASPMPPSAATVEELK
MRLDACFSYLVKLQLPDILAETEDKATKGIELLPGSQPILLPIQLLLDPLLKRFKYHFFG
NRQTNAVDKPEWYFTQILNWVRDHSHFLEQTIQPILNKSEISNIVAKVEFTRGLLQLAAK
KLKIDIPDIIFDDQLLSHTIDELLLFDKELRSQYGYPDHEPGCLHVLTEKQCFEKWISVE
KNFAGQKMDVLLASKTAWISQYKDVTNIDDAKVPECVENFMTLILVITERYKSLPSPTHH
LRFLELQLDLIDDFRIRLLQVMKLKSSAPLSGQYCAIVNGIEYILGVLEEWSNQLFFIQL
NFFKKEQQSMEKINAALESNMEMDEEAFSKISPSNDTGSEEFYQGSVFDSTVELYSHLKQ
EMLQTLRRVIIEEIKDRCWDYQHHKWLTLPSHKDFITPSITTSFCDVLQTCKARLHEVQE
LLSAVVFNILWEAVADSLGQFIFDRVIMNGQFNEGGAKQLSYDVSKGLLPVFTDYTSKPE
SYFRILKDSCTLLNLNKGSLKLLYAILQDEEQEKARAALVDMKVYKLSVSQAMRVLKLRA
DI
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaaaacttgcaatttacaccaaagattgtgcagcatctgtctcaacttatt
gatcatgagtttggagatgacgtgaaagcgttagaaaaagttgaggaattgcttcaagac
gctgtcaaacgacgtgataagctcaagacagatttgaatgtggccacagctgagatccca
actgagatcaggaaagcattaactgaagcagactcatcaatcaccagaatcgatgaaata
acgcttgagtacaaacaagttagaaggggagtgacaggtcagctgactgatgttgaacca
atggttgaaggcctcaaagaaatggtgtcaaaggtcagggttctcgaaagaagcctggat
tacatcaagtggcttatgctagtcgaagaattgagttcggagattcaaggatcacttctg
gttacaacagcgcccccatctctcttcactagcacagacgttcagaagtctttatcagcc
aacgccactccgagtgccgtcagtcacttctcgaaattgtcgcaggtgtacgaatcgtta
caggaatcaaagtgtcaccacttgttagaatttgtggagagtactgtgatgttctggtac
aggatcttaatggagaaactagctggtgaattcagtgagatcaccaaagcccttggatgg
ccgtttgtgacagttgcctcaccaatgcctccttcagctgcaacagtagaggagttgaag
atgaggctagatgcctgcttttcttatttggtgaaattacagcttccagatattttagcg
gagacagaagacaaggccaccaagggaatagagttacttccgggctcccagccaatcctc
ttgccaatccaacttctccttgatcctctgctcaaaaggtttaagtaccacttttttggg
aacaggcagacaaatgctgtcgataagccggaatggtatttcactcaaatactgaactgg
gtcagagatcacagtcacttccttgagcagactatacagcctatcctgaacaagagtgaa
atttcaaacatcgtcgccaaggtggagtttacaagaggcttgttacagctggctgccaag
aagttgaagatcgatattcccgacattatcttcgacgatcaattgctatcccatactatc
gacgaattgcttttattcgataaagaacttcgcagtcagtacggctaccccgatcacgag
ccgggatgcttgcacgtccttacagaaaagcaatgctttgaaaagtggatctctgtagaa
aagaacttcgccggacagaaaatggacgtcttactagcgtcgaagactgcctggatttcc
cagtacaaagatgttaccaatattgatgacgctaaagtgccagaatgtgtagaaaatttt
atgaccctaattctggtcataacagaacgatacaagtcactgccatctcctactcatcat
ctccgattcttggagctacaattggacctcattgatgacttcaggattcgactccttcag
gtgatgaagttaaaatccagcgcccctctctcgggacagtactgtgcaatcgtcaatggg
atagaatacatcctaggggtactcgaagaatggagtaaccaattattttttattcagtta
aactttttcaagaaagagcagcaatcgatggagaaaatcaatgcagctttggaatcaaat
atggagatggacgaagaagctttttcaaagatttctccttcaaacgatactggaagtgaa
gaattctaccaagggtctgtctttgattctacggtggagctgtatagccatttgaaacag
gagatgttgcagacactgagaagagttatcattgaggaaatcaaagacagatgttgggat
tatcaacaccataagtggctcaccctgccctctcacaaggacttcatcactccgtccatc
acgacttccttctgcgacgtcctacagacctgcaaggctcggcttcatgaagtccaggaa
ctcctctcggccgtcgtcttcaatattctctgggaggccgtagcggacagtctcggccag
ttcatctttgatagggtgatcatgaacggacaatttaacgagggcggagctaaacagctc
tcatacgatgtctctaaaggtcttttaccggttttcacagactacacaagcaagccagag
agttattttagaatcctcaaggacagctgtactctcttgaaccttaacaaaggatcctta
aagctcctgtatgccattctccaggacgaagagcaggaaaaagcgagggcagcgttagtc
gacatgaaggtttacaaactctctgtttcgcaggccatgagagtactgaaattaagggcg
gacatttag
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