Apostichopus japonicus (Japanese sea cucumber): 139976220
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Entry
139976220 CDS
T10891
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase-like isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ajj03009
]
139976220
Enzymes [BR:
ajj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
139976220
Ribosome biogenesis [BR:
ajj03009
]
Eukaryotic type
Other ribosome biogenesis factors
139976220
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
FtsJ
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
139976220
NCBI-ProteinID:
XP_071840891
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All DBs
Position
11:17349625..17358578
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AA seq
829 aa
AA seq
DB search
MIAALLNAAAMVLEAAKMKKASIKSLIYESSYWDKSRLSAVTMETQRYLPIIEKLIEETG
AHESNMLSDCLLRVVTYELLFGKGLGGRDAGSFRKGIRPYQRKMKDALKKLKEDMGASNG
KELLEKFGLQAKEDPMPRWVRVNLLKTTVQEVEETFIADGCICILSWKEVGDLVRGKDAK
AISSLMDEYTKSLQPWQFMSDLHLPDVLVFSPATPLFKHHLTLDKKIILMDKASCIPARV
LSPPIDGHVVDACAAPGNKTNHLSCIMQNTGKVFAFDLDQKRTETLKAMVEKSGSTNVEA
QCADFLEVDPTDPKYVKVTHILTDPSCSGSGIVSRKDHLTGETTSRTRLKLLRGLQLRIL
NHAMSFPAVERVIYSTCSVHREENEEVVWRILEANPEFDLETVLPSWHHRPTKASSRDEE
GEDQNEEEYYETDVNYSHLREKLDEEITRKCLRASFNEDKTNGFFVALFKKSRNFSNETG
QGEGEQTVGEDETQEGEVEGNCKDDEYAEVEQVKQDRSKLMDASEHGLDATTKSKKRGFS
HSAEADSSWIKGENSLKKKKKKRKKDKTRDKSVLNEDDFEDVKQFDHSLEDAKVTLTSDD
ADNDVDVKADVGKRIKKRKRQDLIEESQGSHDIGVNNVREDTQDCLEEGKRKPKKKKKDK
NKELMNESIISTNVEDNVENMEKEVSVLKSEEDDVQRKKQKRKRKVITEVNGVDDNVRNS
LDPEGERDGIGSGVVEGKQREEDGSESQRRRKKKKKETKKNLAEEVGDGIRNDDLGKGER
EVRKKDKGAKKDLAERAGDGIRNEDEEKGEREKRKKKKKKKTKDDIKLN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagccttacttaatgctgcggcgatggttcttgaggcggctaaaatgaaaaag
gcttcaataaagtctctcatttacgaaagtagttactgggataaaagccgtctctcagca
gttactatggaaacacagcgatatctaccaatcatagagaagcttattgaagagactggt
gctcatgaaagcaatatgttatcagattgtctcctgagagttgttacctatgaacttctc
ttcgggaaaggtcttggtggaagagatgctggtagtttccgtaaagggataaggccctac
caacggaaaatgaaagacgcattgaaaaaacttaaggaagacatgggtgcatcaaatggg
aaagagttattggaaaaatttggcttacaagccaaagaagatccgatgccaagatgggtg
agagtgaatttactgaagacaacagtacaagaagtggaggagaccttcatcgctgatggc
tgtatttgcattttaagctggaaggaggtaggcgacttagtaagaggcaaggatgccaaa
gctattagttctttgatggacgagtacaccaagtccctacaaccgtggcagtttatgtca
gatctgcaccttccagatgtcctggtcttttctcctgcaactccattgttcaaacaccac
ctcaccttggataagaagatcattttgatggataaggcttcctgtataccagcaagggtc
ctatcgccacctatagacggtcatgtggtagacgcatgtgctgctcctggaaacaaaaca
aaccatctctcatgtattatgcaaaacacaggaaaagtctttgcctttgacctggaccaa
aagaggacagaaaccttaaaagctatggtggagaagtcaggttctaccaacgtggaagcc
cagtgtgcggacttcttagaggttgaccctacagatcccaaatatgtgaaggtcactcac
atcttgaccgatccatcctgctccggttcaggaatagtgtcacgaaaggaccatctgaca
ggtgagaccaccagccgcaccagactgaagttactgcgaggtctccagcttcggattctg
aaccacgcgatgagctttccagcggtagagagagtcatctactcgacttgttcggtacac
agagaggagaatgaagaggttgtctggaggattctggaagctaacccagaatttgacttg
gagaccgtactgccctcttggcaccatcgcccgaccaaagccagttcacgagacgaggag
ggtgaagatcagaacgaagaggagtattacgaaacggatgtgaattattcgcatttgaga
gaaaaactagacgaggagataacaaggaaatgtttaagagcttcttttaatgaggacaaa
actaatggtttcttcgtggctcttttcaagaagtcaagaaacttttccaacgagaccggg
caaggagaaggcgaacaaacagtaggagaagatgaaacccaggaaggagaagtggagggt
aactgtaaagatgatgaatatgcagaggttgaacaagtaaaacaagacagaagtaaacta
atggatgcatcagaacatggccttgatgcaacaacaaaatctaaaaagagaggattttca
cactctgctgaggcggactcgtcgtggattaaaggggaaaactctttgaaaaagaagaag
aaaaagaggaagaaagacaaaactagagacaaatctgttctaaatgaagatgattttgaa
gatgtcaaacaatttgaccattccttagaggatgctaaagtgacactgacatctgacgat
gcagataatgacgtcgatgtcaaggcagacgtcggtaagaggataaagaagaggaagcga
caagatttgattgaagaatcacaggggagtcatgatattggtgtaaataatgtgagggaa
gatactcaagactgtttagaagagggcaaaagaaaacctaaaaagaagaagaaagataag
aataaagaattaatgaatgaatctattattagtacaaatgttgaagacaatgtagaaaat
atggagaaagaggtctctgttctgaaaagtgaagaagatgacgtacaaaggaaaaagcaa
aagagaaaaaggaaggtaataacagaagtcaatggagtcgatgataatgtacggaactcg
ttggacccagagggtgagagagatggaataggttctggtgttgttgaaggaaaacaaaga
gaagaagatggtagtgagagtcaaagaagaagaaagaagaagaaaaaggagacaaagaag
aaccttgcagaggaagtaggagatgggataagaaatgatgatttagggaagggtgagagg
gaggtaagaaagaaggacaagggggcaaagaaggaccttgcagagagagcaggagatgga
ataaggaatgaagatgaagagaagggtgagagggagaaaagaaagaagaaaaagaagaag
aagacaaaggatgatattaaattaaattaa
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