KEGG   Apostichopus japonicus (Japanese sea cucumber): 139976489
Entry
139976489         CDS       T10891                                 
Name
(RefSeq) DNA ligase 3-like isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03410  Base excision repair
Brite
Enzymes [BR:ajj01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     139976489
DNA repair and recombination proteins [BR:ajj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     139976489
SSDB
Other DBs
NCBI-GeneID: 139976489
NCBI-ProteinID: XP_071841379
LinkDB
Position
11:complement(22507247..22526267)
AA seq 1011 aa
MIPYRCLASIKTFVDFHQRRAISFVITQFEIIYEKKHHSENRYQNNQRDLSNLQSTLCQY
RFHFHRVGYPILPSLQNLLYQEQGEMADNKFLVDYAKMGTSKCKKCKQGIEKKSPRIAKL
VPNPFSDEGGDMKQYFHIGCIFESFVRARATTKKIEDPSDLEGFENMEEEEKKTIRKHID
QLASKIANKTPSKKKNTVQAVLSPGGKVVSPTKALAASRPSSSTTNDVPSTTVKSFSTQA
SNADPQHPDNSFREYRKLCARIADVSSYLAKTREVADFLKKGSDGNSYKGDTYLLLKLLL
PGVVKRVYNLNNKQIVKLYSQIFQCDLDDMVTDLEQGDVSETVRKYFVESTGVTPTKKSS
LTLQEVDAFLDRLVPLTREQEQQAELARMTRKCTSNDLKMLIRLIKHDLRINSGSKHILE
ALDPHAYEAFQASRNLRDVVDRVLSNRDANGVPGMNKKLSVRANLMTPVLPMLAEACKSV
GQAISKCPNGMYSEIKYDGERVQIHKQGDDFQYFSRSLKQVLPHKVAHIKDYLPKACPHG
NNVILDSEILMVDTNGKILPFGTLGIHKKSAFQDANACLFVFDCIHFNGENLMDKPLKER
RKVLEQNMTPIPNRIMFSEMEFIKEADDLSAMIRNVIKEGLEGLVLKDINGVYEPGKRHW
LKVKKDYLSQGAMADSADLLVLGAHYGTGNKGGMMSVFLMGVHDPVTDKFYTVTKCGNGL
DDETLAKVNKELQVVKISKNMGKVPSWLKINKSQVPDFVVQDPRKAPVWEIIGAEFSKSD
IHTADGISIRFPRVTRIRSDKDFTTATNLPRLKVLFKKSKEETDVGALLPGSSNSNNSNK
RPKTGNTKTEASPTKKQKTSNTKTEASPAKKQTSANISSPKKEPKEINSGPSLSPSPANQ
EKPLCKYGASCYQKNPEHRRKYSHDATNGGKSLGLPNVFTGMVIHVPKGTQHEEKLKRYI
IAYDGDAVDDLGKSNATHVVRDGHGKHDSEQKLVTSKWLWKCIEKRTLVPE
NT seq 3036 nt   +upstreamnt  +downstreamnt
atgataccatatcgatgcttagcctccattaagacatttgtagactttcatcagagaaga
gcaattagtttcgtaatcacccagtttgaaataatctatgagaagaaacatcattcagaa
aacagataccaaaataaccagagagatttgtcaaatttgcagagcactctgtgccagtac
agatttcactttcacagagtcggttaccctattttgccctctttacaaaacctcttgtat
caggaacaaggagagatggctgataacaaatttttagtggattacgccaagatggggaca
tcaaagtgcaaaaagtgtaagcaggggattgagaagaaatcaccccggattgccaaacta
gttccgaaccctttcagcgatgaaggaggcgacatgaagcaatactttcacatcggctgt
atctttgaatcgtttgtgagggcgagagcgacaaccaagaagattgaagatcccagtgat
ctggaagggtttgaaaatatggaggaagaagaaaagaaaacgataagaaaacacatcgat
cagttagcgtcaaagatcgcaaacaagactccatcgaaaaagaaaaacactgtccaggca
gttctctcacctggtggaaaagtcgtctcaccaacgaaagccttagcagcatctcggcct
tcaagcagtacaacaaatgatgtaccctcaacaactgtgaaaagtttttccactcaggca
tcaaacgcggacccacaacacccagataattcctttcgggaatatagaaaactctgtgcc
aggatcgccgatgtctcaagttacctggctaagactagagaagtcgcagatttcctgaag
aaaggttcagatggaaattcatacaaaggagatacttaccttttattaaagctgttactc
cctggagtggtcaagagagtctataaccttaataacaagcaaattgttaaattatacagc
cagatcttccagtgtgacctggacgacatggtaacagatttagagcaaggagatgtatca
gagactgtacggaagtattttgttgaaagtacgggcgtgacaccgaccaagaagagcagc
ctcaccctgcaagaggttgatgctttcctggatcgcctggtgcctctgaccagagagcaa
gaacagcaagctgagctagccagaatgacacgaaaatgcaccagcaacgatctcaagatg
ttgatccgccttattaaacacgacttgagaatcaattctggctcaaaacacatactggag
gcactagatccccatgcatacgaggcatttcaagcctctcgtaatcttcgtgatgtggtg
gacagggtactctcaaacagagatgctaatggagtaccaggcatgaacaagaaactgagt
gtaagagccaacttgatgacacccgttcttcccatgttggcggaggcttgcaaatctgtt
ggtcaggccatctcgaagtgccccaacggtatgtattctgagatcaagtatgacggagag
agagtacaaatacacaaacaaggggatgactttcagtacttcagtagaagtcttaagcag
gtgctacctcataaggtagcacacatcaaagattacttaccaaaggcctgtccccatggc
aacaatgtcatcttagacagtgagattttaatggtggatacgaacggtaaaatcctaccg
tttggaacactcggaatccataaaaagagtgctttccaggatgccaatgcttgcctcttt
gtctttgattgtattcacttcaacggtgaaaacttgatggacaagccactgaaagagaga
aggaaggttctggagcaaaatatgacaccaatcccaaatcgcattatgttctcagagatg
gaattcatcaaggaagcagatgacctttcagcgatgatcagaaatgttattaaagaaggc
cttgagggtcttgtcctgaaagacataaatggcgtatatgagcccggcaagagacattgg
cttaaagtgaagaaggattacctctctcaaggagctatggccgattccgctgatctgcta
gtcttaggagctcactatgggacaggaaacaaaggcgggatgatgtctgtgtttctaatg
ggtgtccatgaccctgtcaccgacaaattttacaccgtgactaaatgcggaaacggattg
gacgatgaaacattagccaaagtgaacaaagagctacaggtggtaaagatcagtaaaaat
atggggaaagtcccatcgtggttaaagatcaacaaatcacaggttcctgatttcgtcgtt
caagacccaaggaaagcacctgtttgggaaataatcggagcggaattctccaaatcggac
attcacacagcagacgggatctccatcaggttcccgagagtgacgagaatcagaagcgac
aaagattttacaacagctacaaatctaccgagactcaaggttcttttcaagaagtccaaa
gaagagacagacgtaggggcactacttcccggatcttctaattccaacaacagtaacaaa
cgaccaaaaactggaaacaccaaaacagaagcaagccctaccaagaaacaaaagacttca
aacaccaaaacagaagcaagtcccgcgaaaaaacaaacgagcgcaaacatatcgtcaccg
aagaaggaaccgaaggagataaacagcgggccatctttgtcaccctctcccgcaaaccag
gagaagcctttgtgcaagtatggtgcatcttgctaccagaaaaatccagagcatcgcagg
aaatattcccatgatgcaacaaacggtggaaaatctttgggacttccaaacgtttttacc
gggatggtgattcacgttcccaaaggcacgcaacacgaggagaaactcaagcgttacatc
atcgcatacgatggggacgctgtggatgacttgggcaagtcgaatgcgacacatgttgta
cgtgacggacatggaaagcacgatagcgaacagaaattggtcaccagtaagtggttatgg
aagtgcatcgaaaaacgaactctggttccagaatga

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