Apostichopus japonicus (Japanese sea cucumber): 139976773
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Entry
139976773 CDS
T10891
Name
(RefSeq) retinoblastoma-binding protein 5-like
KO
K14961
COMPASS component SWD1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ajj03036
]
139976773
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
139976773
COMPASS/SET1 complex (yeast)
139976773
MLL-HCF complex
139976773
MLL3/MLL4 complex
139976773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_EML
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_C
Beta-prop_WDR11_1st
Beta-prop_SPT8
Frtz
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_RFWD3
WDR90_beta-prop_4th
WDR54
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Pneumo_att_G
Motif
Other DBs
NCBI-GeneID:
139976773
NCBI-ProteinID:
XP_071841625
LinkDB
All DBs
Position
12:complement(23324240..23339457)
Genome browser
AA seq
510 aa
AA seq
DB search
MNLQLLESFGQNFPEESDGTLDCISLALTCAFNKRGTLLAVGCNDGRVVIWDFLTRGIAK
ILSAHVHPVCSVSWSRNGHQLLSASTDNMISVWDVMTGDCTQRYRFPSPVLNIQFHPRNS
QKVLVCPMKHAPVLLHMDGSYKTIPLDEDSDTTIVASFDRRGEYIYTGNAKGKMLVFTTE
SLDLKASFKVTTGTSSSTAIKSIEFARRGGCFLVNTADRVIRVYDCNEVLMCGRSGEPEP
IQKLQDLVNRTPWKKCCFSGDGEYVVGGSARQHALYIWEKKYGNLVKILHGTRGELLLDV
VWHPVRPIIASVSSGVVSVWAQNQVENWSAYAPDFKELDENVEYDERESEFDIEDEDKSV
EDNVDAKAIEDEDVDVTDVEPIAAFLSSDEEAEDEKALLYLPISPEVDDPEEPTWAPTVD
PTDEVLQTDSNKRSLSSDLSPKKKKVKTFDISLESAPSDEIHPFLSTRGDNKSKKKIGQQ
PKPGKDTKTKKNRHDRQRKRGMVDDYSETE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcaacttcttgaatcgtttgggcaaaactttccagaggaaagtgatggcact
ttagattgcatcagcttagcactgacgtgtgccttcaataagagaggcacactgctggca
gttggatgtaacgatggccgtgtcgtcatctgggatttcctgaccagagggatcgccaag
attcttagtgcacacgtccatcctgtctgctctgtcagttggagccgtaacggtcaccag
ttactgagcgcatcaacagataacatgatatcagtgtgggacgtcatgactggtgactgc
acacaacgctacaggttcccgtctcccgtcctcaacatccagtttcacccgagaaactca
caaaaagttttggtttgtccgatgaagcacgcacccgtcctgttgcacatggatggatct
tacaaaacaataccactggatgaagattctgacacaactatcgtggcttcctttgataga
cgaggagaatatatttacacaggaaatgctaaaggaaagatgttagtttttacgacagaa
agcttggatctaaaggcttctttcaaggtcaccactggtaccagcagttctaccgccatc
aaatcaattgagtttgccagaagaggcggttgtttcctggtgaatacggctgacagagtc
atcagggtttacgactgtaacgaggtcttgatgtgcggcagatcaggggagccggaaccg
atacagaagctgcaggatctcgtaaatagaaccccgtggaagaaatgctgcttctcggga
gatggcgagtatgtcgttggaggttcggctcggcagcacgctctttacatctgggaaaag
aagtacggcaacctggttaagatcttacacggaacgagaggagagcttctgttagatgtc
gtttggcatccagtcaggccaatcatagcatccgtatctagtggagtcgtgtctgtatgg
gctcaaaatcaagtcgagaactggagtgcctacgcaccagactttaaggaactggacgaa
aacgtggaatacgacgaacgagagagcgagtttgacatcgaagacgaagataaatccgta
gaagataatgttgatgccaaagcgattgaagatgaagacgttgatgtgaccgatgttgaa
cccattgctgcatttctcagtagtgatgaagaagctgaggacgagaaagcactgctatac
ttgccgatatcaccagaagtcgatgacccagaggaacccacctgggcccccacagtggac
cctaccgatgaagtccttcagacagactccaacaaaaggtcactgagctcagacctttca
ccgaagaagaaaaaagtcaagacatttgatatcagccttgagagtgcacctagtgacgaa
atacatccattcctgtcaacaagaggagacaacaagtccaagaagaagatcggacaacag
ccgaaacccgggaaagataccaagaccaaaaagaacaggcatgaccgacagaggaagagg
ggcatggtggacgattactcggaaacggaatga
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