Apostichopus japonicus (Japanese sea cucumber): 139977074
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Entry
139977074 CDS
T10891
Name
(RefSeq) ATP-dependent RNA helicase cgh-1-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03018
RNA degradation
Brite
Enzymes [BR:
ajj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139977074
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
139977074
mRNA degradation factors
5'-3' decay
Decapping complex
139977074
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Gene silencing
piRNA pathway
139977074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139977074
NCBI-ProteinID:
XP_071842195
LinkDB
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Position
12:complement(20158229..20180120)
Genome browser
AA seq
499 aa
AA seq
DB search
MATAPPQQTQLNNRFNATNAHSPSRSAGGRNMADGEGQTRQTGQRSQGVSSARSETTNGN
NSRPVNDQDVISEDPNWKSKLKLPPKDNRIRTSDVTKTKGNEFEDYCLSRNLLMGIFEKG
WEQPSPIQEESIPVALAGRDIMARAKNGTGKTGAFLIPVIERVSPEKDEIQALILVPTRE
LALQTSHICKQIAKHTGHSVMVTTGGTSLRDDIMRLDKTVQILVSTPGRALDLISKDIAR
MDKCGMLVLDEADKLLSQDFKGLLDDLIQLLPQDRQVMLFSATFPICVKSFKQRYLNKPH
EINLMEELTLKGITQYYAFVEEKQKVRCLNTLFSKLQINQSIIFCNSTQRVELLARTITK
LGYGCFYIHSRMGQEHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRNAE
TYLHRIGRSGRFGHLGIAINLVTYDDRFNLYNIEKELKTEIKPFPSKAYVDKKLYVAEYQ
MVSGDGDGEEDEAAGEAET
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagctcccccacagcaaactcaactcaataatagatttaacgcgacaaatgcc
cacagccccagcagaagtgcagggggaagaaacatggcggacggagaaggtcagacaaga
cagactggtcaaaggtcacaaggggtgtcctcggcacgaagcgagacgacaaatggaaac
aattcaagaccagtgaacgatcaagatgtaatatcagaagatcccaactggaagtccaaa
ctaaagctcccacctaaagacaacagaataagaacctcggatgtaaccaaaacgaaaggg
aacgaattcgaagattactgtttgtctcgcaacctcttgatgggcatctttgagaaggga
tgggagcagccatcgccaattcaggaagagtccatccctgtcgccctcgccgggagggac
attatggccagggcaaagaacggaacaggaaagacgggggcgttcctcataccagtaata
gaacgggtctcgccagaaaaagatgaaatacaagcattgatacttgtgccaacgagggaa
cttgccctacagacaagtcatatttgtaaacaaattgcaaagcatacagggcacagcgtt
atggtgaccaccggtggcaccagcctgcgagatgacattatgagactcgacaaaacagtt
caaatcttggtctcgacgcctggacgagctctggacctgatcagtaaagatattgccaga
atggacaaatgtggaatgttggtattagatgaagcggacaaattactctcacaagacttc
aagggtcttttggacgacttaatccaacttctgccgcaggatcgtcaagtcatgctcttt
tcagcaaccttcccaatctgtgtaaagtctttcaagcaaagatacctgaacaagccacac
gagatcaatctaatggaagaacttaccctgaaaggtatcacacaatactatgcttttgtg
gaagagaaacagaaagttcgctgcctcaacactctattctccaagctacaaatcaaccag
tccattatcttttgcaactcaacccaacgtgtagagcttttagccaggaccattaccaaa
ctggggtatggttgcttctacattcactcaaggatgggacaggaacaccgtaatagagtt
ttccacgacttcagaaatggagcctgcaggaatctggtctgcacagacctatttaccaga
ggtattgacatacaagcagtgaacgtcgtcatcaattttgacttcccccgaaatgcggaa
acctacctgcacagaatcggtagatccggacggttcggccacctcggtatcgcaatcaac
ttggtgacatacgacgaccggttcaatttgtacaacattgagaaagaactcaaaacagag
attaagcccttccccagcaaggcgtacgtggacaagaagctctacgttgccgagtatcag
atggtcagtggagatggagatggggaggaggatgaggccgcgggcgaggccgagacttga
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