KEGG   Apostichopus japonicus (Japanese sea cucumber): 139977097
Entry
139977097         CDS       T10891                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03030  DNA replication
ajj03410  Base excision repair
ajj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ajj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    139977097
   03410 Base excision repair
    139977097
   03420 Nucleotide excision repair
    139977097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ajj03032]
    139977097
   03400 DNA repair and recombination proteins [BR:ajj03400]
    139977097
Enzymes [BR:ajj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     139977097
DNA replication proteins [BR:ajj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    139977097
DNA repair and recombination proteins [BR:ajj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      139977097
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 Sld5
Other DBs
NCBI-GeneID: 139977097
NCBI-ProteinID: XP_071842243
LinkDB
Position
12:complement(7273520..7318089)
AA seq 2282 aa
MVLQNSGRYVADRSGNSGSKQWEDTSAEARLQRAVLSDELDSRYGFDRYKEPQERVGWLM
NMHPADILDENKKLISAVDYYFLQEDGGRFKVSLPFKPYFYVATRKDCEREVSSFLTRKF
VGSLALIETVAKEDLDLANHLVGLKRNYLKLSFNSVNDLIKVKRLLMSKVRKNRERENAN
TTYTSLLASHLTGEGSSVATASKPKFTDQMDNIIDIREYDVPYHVRVAIDEKIHVGHWYS
VQGRGSMAPIIKHRDDLLDRPDPVVMAYDIETTKLPLKFPDAEIDSIMMISYMVDGQGYL
ITNREVVSEDVEDFEYTPKPEYEGPFIIFNEENELALLQKFIEHIMEIRPNIISTYNGDL
FDWPFVEARCSFHGMDMYREIGFQKDAAGEYKSRACIHMDAYRWVKRDSYLPVGSQNLKA
ATKAKLRYDPIELDPEEMCRMASEQPQVLASYSVSDAVATYYLYMKYVHPFIFALCTIIP
LEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTDDGHVLDQETYVGGHVEA
LESGVFRSDIPCRFRMKAEAFDELIEGVEKAMRFTIEAEEKIPMDTVTNFDEICDNIKAK
LAALRETPVRLENPIIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGARCQRS
MLWKWRGDYMPASRNEYYRIQQQLESEKIPPLEPGGPPRIFHELSKEEQANLEKKRLGDY
CRKAYKKTKITKEEERTTTICQRENSFYVDTVRAFRDRRYEFKGLLKVWKKKVSAAMEKG
DAAEIKSAKSKEILYDSLQLAHKCILNSFYGYVMRRGARWYSMEMAGIVCYTGASIITKA
RELVEQIGRPLELDTDGIWCVLPSSFPENYVVKTTNPKKAKVTVAYPGAMLNIMVYDHYT
NDQYQELTDPARLQYTVRNENSIFFEVDGPYLAMILPAAKEEGKKLKKRYAVFNFDGSLA
ELKGFEVKRNGELQLIKIFQASVFEAFLKGSTLDECYAAVAKIADYWLDVLYSKASDMPD
SELFDLIAENRSMSRKLADYGSQKSTSISTAKRLAEFLGDQMVKDKGLSCKFIISKKPEG
APVTERAIPQAIFQAEPGVMKHYLKRWLKDQSMSTFNIRDILDWEYYVERLGSCIQKIIT
IPAALQQVSNPVPRIRHPEWLHKKLLEKNDIYKQKRISEIFSFVPRKKKVQEELEDTPME
SQEDDTEDNAMVTDIEDFGSKKRPGTIMPVVTTKRKRVPSGFNGKHPSKQDEREMSQSWQ
ERLGPPPAMGTSRRHIQKWLAYHKEKWSMQVTQRKEMRKKRRVDDDGGSIGGAVMRMGPS
RGLGNFLRKTARSLLDLPWQIIQVAETSHPGLYKLWALIGQDLHSIKLLVPRVFYINQRN
QKDSTEGPMWKKVNRTLPRSNPVFNLYQYFVPEDIYSVHANDVNTDLSAPEIEGVYETQV
PLDFRALVNLGCVCQVNRDYARFLAGKELETFDLPQLEFRTVAQFAYLPADSFRRIFLYH
HVSGTKMICSLFFSTASNASIFALDSVRDNNMGNLKNAYQLERRSKIEKGADPALLPNEE
HSFEIQIEKDDKKIYRAISRLLTAYKDEKRGPTIIAVQSSSTNEELYQLIPNLGEFPLVR
LHVRDSKDLYNVLDWQRQGARRMIKHYLNVDVILMNYLEQARYFHLPVGNMPEDAGIFGA
DLFFARHLQKQNHVLWASPTDRPDLGGREADDNRMVTEFEESNVVELNQSGFYQTVCIEL
DMASLAVNTLLQSHHISELEGGAGSIAFDAIPQSSLEEMVTGQPGAAASLASYDETALCS
VAFRIMKTMVHYWLKDVTDYSNVLADYQIIHFYRWLRSPSALLYDPALRRTLQNLMKKLF
LHLIAEFKRLGSNIIQANFNRIILCTKKRRIVDAIAYADYITSSIKSKNLFHGIELTYKQ
CWEVLMWLDPANHGGIKGKLPRSLESEEEGEEDSEMDQSQEGTRLDEDDSEPVVEMNWNI
MHYLPAGAACQDTYNMIIAGYILAVYKNAQEESERMTPGNTPIRRRGNSQPTQPDSSSTP
NTVSFAQNLIDGELSQKLFAITQKIERKLSGNRGSRVNAAEEFPQLPGSHLPLKNPSLEF
VKAICKVLSLDPNVTIQVSKLKRNLLKLINVGEFADESDWTDPCLTYVLPEIICKVCNHC
RDLDLCRDPLLDHEGGTVALWQCEQCNSEYDVDLIEGALIEAVNRASMAFTLQDVVCSKC
HQVKMPNMTRYCDCAGNFETTLSPKVFVNKMKTFKNLAQHYKMVMLEDTVAWVLEMNSSL
LR
NT seq 6849 nt   +upstreamnt  +downstreamnt
atggttctccaaaacagtggcagatatgttgctgacaggtctggcaacagtggctccaag
caatgggaagatacctcagcagaagctcgccttcaaagggcagtgttgagcgacgagttg
gattctcgttatggctttgataggtacaaggagccacaggaacgtgttggatggctgatg
aacatgcacccggcggacattctcgatgagaataaaaaactgatcagtgctgttgattac
tattttctgcaggaagatggcggaagattcaaggtctctctgccctttaaaccatacttt
tacgttgctacgaggaaagactgcgaacgggaagtgtcctcatttttgacccggaaattt
gtgggaagtcttgcattgattgaaacagttgccaaggaagatttggacctggctaatcat
cttgtcggattgaagagaaactatctaaagctgtccttcaactcggtcaacgaccttatt
aaagtcaaacgactcctcatgtcaaaagtgcggaagaacagagaacgtgagaatgccaat
acaacttacacatctcttctggcgagccatctgacgggagagggttcgtccgtggctaca
gcttctaaaccaaagttcacagaccagatggataacatcatagacatacgagaatacgat
gtaccgtaccacgttagggtagcaatcgatgaaaagatacatgtaggtcattggtattct
gtacaaggcagaggttcaatggcaccgattattaaacatagagatgatttactggacaga
ccggaccctgttgtcatggcatacgacatcgagaccaccaagctgcctctcaaatttccc
gatgctgagattgattctattatgatgatctcttacatggtggatggacaggggtacctc
atcaccaaccgagaggtggtatctgaagatgtggaggactttgaatacacccccaagcca
gaatacgaaggcccattcatcatctttaatgaagaaaatgaactggcgctgttgcagaaa
ttcatagaacacatcatggaaatcagaccaaacatcatcagcacttacaacggtgacctt
tttgattggccttttgtggaggcgaggtgtagctttcacggaatggacatgtatcgagag
atcggctttcagaaagacgcagcaggagagtacaagtcacgtgcttgtatccacatggac
gcatacagatgggtaaagcgtgacagctacctgcccgtcggaagtcagaacttaaaggct
gccacaaaagcaaagctgagatacgatccaatcgaattggaccctgaggagatgtgccgc
atggctagcgagcaacctcaggtgctcgcaagttactcggtgtctgacgctgttgccacg
tattacttatacatgaaatatgtccatccattcatctttgcactgtgtaccatcattccg
ttggaaccagatgaggtcttgagaaagggttctggtaccctctgcgaggcattgctgatg
gtacaagcattccatgcgaatatcatcttcccgaacaaacaagagcaagttttcaacaag
ttgactgatgatggccacgtcctggaccaagagacctacgtcggtggccatgttgaggcc
ttagagtccggagtgttcaggagtgacattccctgcagatttagaatgaaagcagaagct
ttcgatgaacttattgaaggagttgaaaaggctatgaggttcaccatcgaagccgaagag
aaaattccaatggacacggtcacaaatttcgatgagatttgtgacaacatcaaagccaaa
ctcgcggcattgagggaaacacctgtacgccttgagaatcctattatttatcatttagat
gtcggggccatgtatcctaacatcattctcaccaatagactacagccctcagccatggtg
gatgaggctacatgtgctgcctgtgacttcaacaaaccaggagcaagatgtcagaggagc
atgttgtggaaatggagaggagattacatgccagcttcaaggaacgaatattacagaatt
caacagcagctcgagagcgaaaagattccaccgctggaaccaggcggacctcccaggata
tttcacgaactctcaaaggaagaacaggctaatttggaaaagaagaggttaggtgattat
tgccgtaaagcctacaagaagactaagattaccaaagaagaagagagaaccacaactatt
tgtcaaagagagaattctttctacgtggatacagtccgtgcattcagagacagaagatat
gaattcaaaggcttgttaaaggtttggaagaagaaagtatctgctgcgatggagaaagga
gatgccgcagaaatcaagagcgctaagagcaaggagatcctttacgattccttacagcta
gcccacaaatgtatccttaattccttctatggatatgtcatgaggagaggagctcgttgg
tactctatggagatggcaggtatcgtgtgctatacaggagccagcatcataacaaaggca
agggaactggttgaacaaatcggacgtcccctggagttggacacagacggtatctggtgt
gtcttaccgtccagcttccccgagaattacgttgtcaagacgaccaacccaaagaaggct
aaagtaacagtggcttatcctggtgcaatgctcaatatcatggtctatgatcactacact
aacgaccaataccaagaactgacagatcctgctagactccagtacaccgtcaggaatgaa
aactccatcttctttgaggttgacggaccatacctggctatgatcctcccagcagccaag
gaggaaggaaagaaactgaaaaagagatatgccgtcttcaactttgatggttccctagca
gaattgaaaggattcgaagtcaagagaaacggagaacttcaactgatcaagatattccaa
gcgtccgtatttgaagcgttcttgaaagggtcgacattggatgaatgctacgccgcagta
gctaaaatagcagattactggctagatgtgctatacagcaaggcttcagatatgccagac
agtgaactgtttgatctcatcgccgagaatcgtagcatgtcgaggaaactggccgactac
gggtctcaaaaatccacctccatcagtacggcaaagagacttgctgagtttctcggtgac
caaatggttaaagacaaaggcctgtcatgtaagttcatcatctcgaagaaacccgaggga
gccccagttaccgagagggccatcccgcaggccatctttcaagctgaaccgggtgtgatg
aaacattatctgaaacgttggttgaaagatcagagcatgtcaaccttcaatatcagagac
attttggactgggagtactacgtagaaagactggggagctgtatccagaagattattacc
attccagcagctctacagcaggtttctaatcctgttcctcgcatccgacatcctgaatgg
ctgcacaagaaactcctggagaagaatgacatctacaaacagaagagaatcagtgaaatc
ttttcatttgttcccaggaagaaaaaagtgcaggaggagttagaggatacaccgatggaa
tctcaggaagatgacactgaagataatgccatggttacggacattgaggactttggatcc
aagaaacggccgggtaccatcatgccggtggtgactaccaagaggaaaagagttccgtca
gggtttaatgggaagcacccatccaagcaagatgaaagagaaatgtcacagtcatggcaa
gagagacttggcccaccaccagcaatgggaacatctaggagacatattcagaaatggttg
gcctaccataaggagaagtggagcatgcaggtcactcagaggaaggagatgaggaagaag
aggcgggtggatgatgatggtggtagcatcggtggagctgtgatgaggatgggtccatct
agaggtcttggcaacttccttagaaagactgcaaggtcactcttagatctcccatggcag
attatccaggttgcagagacgagtcatccaggtctctataagctctgggctctgattggt
caggatcttcattctatcaagctacttgtcccgagggtattttatatcaaccagaggaac
caaaaagattccaccgaaggaccgatgtggaagaaagtgaaccgtactttacctaggtcc
aaccctgtcttcaatctttatcagtattttgtgccagaagacatctattcagttcatgct
aacgatgtcaacactgacctctctgcccctgagattgaaggagtctacgagactcaagta
ccgttagacttcagagctttggtcaaccttggatgtgtctgccaagtgaacagggattat
gctcgatttctggctggaaaggaattagaaacctttgaccttccgcagctggagtttagg
acagtggctcaatttgcctacctcccagccgacagtttccgtagaatcttcctgtatcac
cacgtatctggtaccaagatgatctgtagtctgttcttctctacggcatcaaacgcttcc
atctttgcgttggattctgttcgtgataacaacatgggtaacctgaaaaatgcctaccaa
cttgaaagacgttcaaaaatcgaaaagggggctgacccagcactcttgccaaatgaagaa
cacagctttgagattcagattgaaaaagatgacaagaagatttatcgagccatctcccgg
ctcttgactgcctacaaggacgagaagagaggaccaaccatcatagctgttcaatcttca
tccaccaatgaggaactgtatcagctcattcctaaccttggtgaattcccattggttcgt
ctccacgtgagggactcaaaggacctctataacgtccttgactggcagaggcagggagcc
cgaaggatgatcaagcactatttaaacgtggatgttattctgatgaactacttggagcag
gcaaggtacttccatctgccggtcggcaacatgccagaggatgcaggcatctttggagct
gatctcttctttgcgagacatctccagaaacagaatcatgtcctttgggcttctccaact
gatcgtcctgaccttggaggtagagaagctgatgataacaggatggttacagagtttgaa
gaatccaatgtggtagaattgaaccagtctggtttctatcaaactgtctgcatcgagttg
gacatggcctcgctggctgtgaatacgttactacagtcccatcacatcagcgaactagag
ggcggtgctggaagtatcgcattcgatgcgatccctcagtcgtcgttggaagagatggtg
accggacagcctggtgctgcagcctcattggctagttatgacgaaacggcgctgtgttct
gttgctttcagaatcatgaagacaatggtccattattggttgaaagatgtcacagactac
agcaacgtactggctgattatcaaattatccacttttacagatggctgcgatctccctca
gccctcctttatgatccagctcttagaagaacactccaaaacttaatgaagaaattattc
ttgcatctcatcgccgagttcaagagacttggatcgaacataatacaagctaacttcaac
cgcatcatcctttgcacgaagaagcgtcgaatcgtggacgccattgcttacgcggactac
atcaccagtagcatcaaatctaagaatctctttcacggtatcgagctgacatacaagcaa
tgttgggaggttttgatgtggctagacccagctaatcatgggggtatcaagggtaaatta
ccgaggtccctggagtcagaagaggagggggaagaagacagcgagatggaccagagccag
gagggaacacgtttagatgaagatgacagcgagcctgtagtcgaaatgaattggaacatt
atgcactatctaccagctggtgcggcttgccaagacacatacaatatgattattgctggc
tacatcttggctgtctacaaaaatgcccaggaagaaagtgaacgaatgacgcctggcaac
acaccaatccgtcgccgtggtaacagtcaaccaacacaacctgactcctctagcaccccc
aatacagtcagctttgcccaaaatctcatcgatggggaattgtcccagaagttgtttgcc
attacacaaaagattgagcgtaagctatctggcaacagagggtctagagtcaacgctgcg
gaagagttcccacaactgccaggatcgcatttacctttgaagaatccaagcctggaattt
gtgaaagcaatttgcaaggttttatctctcgatccaaatgttaccatccaagtctcaaaa
ctgaaacgtaatctgctaaaactgatcaacgtcggtgaatttgcggacgagtccgattgg
acggatccgtgtttgacgtacgtacttcccgagatcatctgcaaagtctgcaaccattgt
cgagatctggacctctgccgtgatcccctcttggaccatgagggaggcacagttgccctc
tggcagtgcgaacaatgcaacagcgaatacgatgtggatctgatagagggcgcactgata
gaagcagttaatcgcgcttcaatggcatttactctacaggatgtagtctgttcaaaatgt
caccaggtcaagatgccaaacatgacacgctattgtgactgtgctggaaactttgagacc
acgttgtcaccaaaggtctttgtgaacaaaatgaagacgtttaagaacttagcacagcat
tacaagatggtgatgttagaagacactgtagcttgggtattagagatgaactcatcctta
ctcagatga

DBGET integrated database retrieval system