Apostichopus japonicus (Japanese sea cucumber): 139977999
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Entry
139977999 CDS
T10891
Name
(RefSeq) double-strand break repair protein MRE11-like
KO
K10865
double-strand break repair protein MRE11
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03440
Homologous recombination
ajj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139977999
03450 Non-homologous end-joining
139977999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ajj03032
]
139977999
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139977999
DNA replication proteins [BR:
ajj03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
139977999
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
139977999
BRCA1-C complex
139977999
NHEJ (non-homologous end-joining)
MRX complex
139977999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
V-ATPase_H_N
Saf4_Yju2
TrAA12
DUF5320
Motif
Other DBs
NCBI-GeneID:
139977999
NCBI-ProteinID:
XP_071843993
LinkDB
All DBs
Position
12:25597965..25630620
Genome browser
AA seq
690 aa
AA seq
DB search
MPKGGTNDTRDDPEDEENTFKILVATDCHLGYMEKDSVRTDDSLNTFEEILQHAQKEKVD
FVLLGGDLYHDNKPSRKSLHCSMALLRQYCMGDNPVQFEFLSDPSVNFSTNPFPVVNYAD
PNMNVDMPVFSIHGNHDDPAGLGNLCALDVLSIAGLVNYFGKSPSLEDVKISPILLRKGR
TKLALYGLGSIRDERLHRMFLQGKVSMLQPKENRDSWFNLFVIHQNRAKHGEHNYIPEQF
LNEFIDLVVWGHEHECLVDPVWNPTQNFFISQPGSSIATSLSHGEAAKKHVALLQVRNKE
MKCTKIPLETVRQFFIEDVCLLDTDLDPADVHAEKKVEKYCAAKIEELISKAVDEHSGNP
KQPKLPLVRLRVDYSGGFSTFNVNRFGQQFSNKVANPKDLILFNKKKEARTKSDDTKPGE
DLGDFLRPEALNTQRVEDLVKEYFTSTEKAKQLELLSEKGLGDAIREFVEKKENDAIQEL
VKYQLGKIQTSLRQRNTSEDHLRDELDRIKEERTKMSEAERTAEVKKVMEVAKQKRQEAG
DDDYDSDEMGNGSSSDEDSTVPSTSKGRGRGRGRGRGRGRGTRGRGASASRGRQSKTAEK
ESLVSNSSTSSRSARNSQIKQKALPFGSRGNTSRKQVIQFEDDSDEDMSTSSNSSRIRKR
RESSPEAVVTVEDSDDEDPFSVPPPKRRGR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaggaggtactaatgacacgagagatgacccagaagatgaagagaacactttt
aagattctcgtggcaacggactgccatcttggatacatggagaaagattcagtccggact
gacgattctctaaacacttttgaagaaattctacagcatgcgcagaaagagaaggtggat
ttcgttctgttaggaggggacttataccacgataacaaaccctcgagaaagtccttgcat
tgctcgatggccttactcagacagtactgcatgggggacaatccggtccagtttgaattt
ctcagtgatccaagcgttaacttctcgacaaatccttttcctgtcgtgaattacgccgat
ccgaacatgaatgtcgacatgcctgtattctctattcatggtaaccatgacgacccagca
gggctgggcaacctctgtgccttggacgtattgagcatcgctggactcgtcaattatttt
ggcaaaagcccgtcgctggaagacgtcaaaatatcaccgatccttttacgaaagggaaga
accaaacttgctctgtatggtcttggatccatacgagatgagcgtctacacagaatgttt
ctgcagggcaaagtgtccatgttacaaccgaaggaaaacagagattcatggttcaatttg
tttgttattcatcaaaatagagcaaagcatggcgaacataactacatcccagaacagttc
ctgaatgagtttatcgacctcgtggtctggggtcacgagcacgaatgtctcgtagatcca
gtctggaatccaactcagaacttttttatcagtcaaccagggagcagtatagcaacctcc
cttagccacggggaagccgctaagaaacatgtagcccttcttcaggtccggaataaagaa
atgaaatgcaccaagatacccttggaaacggtcagacagtttttcatcgaagatgtgtgt
ctgctggacacagatttggaccccgctgacgtacacgctgagaagaaagtggagaaatat
tgtgctgcaaagattgaagaattaatttcgaaggcagtggatgagcactccggtaatcca
aagcagcctaaattacctctggtcagactcagggtcgactacagtggtggattctcaacg
tttaatgtaaacagattcggacagcagttcagcaacaaggtcgccaatcccaaagatctt
atcctgttcaacaagaagaaagaagcgagaacgaaaagcgacgataccaagccaggagaa
gacctcggtgactttctccgaccggaagcattaaacacgcagagagtggaagatttggtg
aaagaatattttaccagcactgagaaggcaaagcaactggaattgctgtcagaaaagggg
ctcggcgacgccatcagggagtttgttgagaagaaggaaaacgatgcaatccaagaactc
gtgaaataccagctagggaagattcagacgagtttacgacaacggaacacaagcgaagac
catctcagagatgagcttgatagaattaaagaagaacgtacgaaaatgtcagaggcagaa
agaacagcagaagttaaaaaggtgatggaagtcgccaaacagaaaagacaggaagctgga
gatgatgattacgacagcgatgaaatgggaaacggcagctcctcagatgaagacagcacc
gttccatctaccagtaagggcagaggaagaggcagggggaggggtaggggtaggggcaga
ggcacgagaggaagaggtgcatctgccagcagagggcgccaaagcaaaacagcagaaaaa
gaaagcctagtctcaaatagcagtacatcttccaggtcagccagaaatagccagataaag
caaaaggcattgccatttggcagcagaggaaacacatccaggaagcaagttatccaattt
gaggatgacagtgatgaagacatgtccacgtcctccaattcctccagaatcagaaaaaga
cgggaatcaagtccggaggcggttgtgactgttgaagattcagatgacgaagatccattc
agcgtaccccctcctaaaagaagaggacgttaa
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