Apostichopus japonicus (Japanese sea cucumber): 139978353
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Entry
139978353 CDS
T10891
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
Proteoglycans [BR:
ajj00535
]
Cell surface proteoglycans
Others
139978353
Lectins [BR:
ajj04091
]
C-Type lectins
Others
139978353
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139978353
NCBI-ProteinID:
XP_071844586
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Position
13:2646419..2679633
Genome browser
AA seq
2437 aa
AA seq
DB search
MLRMRFVMRIIILSLFWILSVKESSGVSFYGSSYLKLPLQGTSLARRLSEIEVEFKTSRS
KGLLLVAIGSEDHLLLRLRRGQVQAELRQGTTNPLLITSKPRPKFSDLQWHRIRLSVLEN
SVQLYVDDILHKEASLPSRFAALSTTLALYIGGKGLEDELEFLTGYDVPYRGCMQNVYVN
SKRVLNIIQRNNNAIIGEVTWDCSPEFEANRDDPFSFVKDTSFISFQKWLMRTHGSIQFW
LRTSSQSGLLLFNHGKGGSFFATELWKGRLRILFNGGGDTSGILSSVSLDDGKWHFLKLS
VSQRELEISIDLDPETFPLDEALSFSFTGYLYIGGVVHRARQQAVTVGLHSIVHPTSGGS
FEGCMRDIELDNEQLTLGDTQVTHGIEVGCVYQFPCSDQPCVNRNDVCHDIGISEYECVC
PSCQVVTPPTNKSSSLPSLDPTAATDVVREDARPLYMVSPLSVSEGSGALLTIVNIRLNF
NLDDMDLRESQLIFRMVQLARYGRVEIDIPGRQDSDRFTLLDLIGRKISYIHDGSENFSD
LIAFEMSVLGRRSGVPSRLRSGITIQLPVEIVPVNDPPFLVIAEDNSLRIISMTRRQITP
EFLTAEDPDTSPEDLVFTIISQPNGVGQFELDDDDDVVTSFTQADVNEGELFYVHTGPQQ
KSRIVLRVSDGMERSDIQSLRIEAMPLTLRLQNSSQLMINPQRSQLILPKHLQVVTNDPD
DEFDVTFRVVSPTRFGDIQKLDRDSNNWFSITTFLQRDIDQHLLRYIASSANGHTSVVDD
EVILTASSGDASIDVISLQIQIVVTSILIRHNTGLILDSVRHAIISDSNLTVIAENPLLD
LPMSINILRIPMKGDMFLHPNTKLTEGSNFTVDDLKDNLVSYQVHPQYQEGFNDSFLFQA
VLPNAESEIQVFNITFIPDLQQLTVINEGVIVSEGGSAIIDQDSLFISSKATDEFTFTVT
KFPAHGNLQLYDGSNVRNRNVSSFLSFDLKSRSLRYQHDDSESTLDEFSLDVRSTYIDRF
GERKSLHYNTTFNVSIQLQNDNVPLRVVDKVFKVLKNGKTPLTDMDLSYHDNDSDFDDAD
IFYQRLTIRNGDIVSADDESQRVLRFTQRDLTEGNLIFKHRGDILSTRVTFFVFDNDRSN
LQSAFLQIEAYEPYLQVVNNTGIEVQKGSRKVINASTLSTESNLKIREHSIIYLVTSPPR
HGQIMRYDESVLQFTQEDIQTGIISYISSNDSSSSIHDSFNFTVQGRDLATNGTFAIRIY
LSSTQTLPTLVQNETLYVEEGKMALIPKSSLKVSHPNHPMSEISYIVSKPPRFGFLELNP
SALIDIMNQDRNGNLSTEEAPITLSRFTQLDINRKRLVYVQTISDQSQDTIVFNVTNGYT
TITNVTLRIEIVPDTIPVEIQNMTVEEGMSKVILSERINVSHPYYRGQDFDIFIVTPPRY
GIIEMVNSKGIPLASFTTKDIRNEFVYYVHNGSESLHDSFEFILNSTSLKKESDLMWMHI
SVTPVNDIPPFVSTNKNLMAITNARTVITTASLSAEDADSSDDEIVFLITVPTNGKVVLG
RDSFRAVSKFTQADLEVSQVFFIHSGARSGGFRFQVSDGLHNTLQQIFTITAQPLLLSIV
NNTELMVKPGTLQPITAKLLKVITNENPVTHLSHPITYVVTAVPSYGKLVKVLSKEAVTN
TFSFKEVMTFTQMDIDDGLIAYKHKNISGSQNPQRDVITFDVFLSLSQNLTDVNFHIFLG
DKAQSTPPPTTFLFTTALLTASQDAQTEPAMLANVEVEEGESVNITLRDLISATGVEEAE
NTRIEFNITSMPSHGSLVIGEQELRKFSTFRAAEVEEDGIVYNHDDSEERGDSFNFTVKV
SSLIDSSFRVISSTSTQFVVSIIPVNDHNFKFLTPYLRMNVIQGAEVLLTPKVLNVEDRD
NFPSEIVYHLFSQPSNGELVSAEDPTSLLETFSQENVNQGRVLYKHNGGERTGAFLFRVT
DGSHMQMRQFYITVTHRALYVTMLDSIALRQGASTVTIKSDLFNITSNSEVAGKVHYNIT
LPPLFGRISLNGSEVASFSHSDISQNMVTYTQLDFGSSQDHFTMIAYDDYATSDQINLTV
AVRPQVFSEQISAHSGSQVSLTTVELNATLLAAVVSGDIFVEVLSEGSHTKLVDNRTLET
LTKFNYSSLSQNEIAILIDHVEIAENETLVDLITLNISAAQTQSVTVTLVINVSAALMDP
TTIPPQLTTEKNIIPPLPAVERNRTNFIDTFGFPITKKEPTTPHTTPIGAAARRKAVGGV
NFILILVPLMVLMIIIVAVVLFLVFRRQNSHKNTEEKPKPVNGDTKEVEKPPIVARPVAT
SYLPHVSVIANPNAGTDQNHLATQPIISRSVQSPLVPEVKVTPLGRPPSPKNSYASLTSN
GSVNGGTLGYNWQTCDPDLVDHLKQSNPSLQRSQYWV
NT seq
7314 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaatgagatttgtaatgcggattataattttaagccttttctggatactatcc
gtgaaggaatctagcggagtctccttctatggcagcagttacttaaagttaccacttcag
ggcaccagtctcgccagacgtctttcagagatagaggtggagtttaagacgagcagaagc
aaaggacttcttctagttgccattgggtcagaggatcacttattactcagactgaggcga
ggccaggtccaagcagagctccgtcaaggaacgaccaaccctctgctgatcacttccaag
ccacgacctaagttcagcgacttgcagtggcacaggatccggttatcggtattggagaac
agcgtgcaattatatgtcgatgacattctgcataaggaagcctctctgccgtcgagattc
gctgccttgtcgaccacgttggctctctacatcggtggcaagggtcttgaagacgagttg
gaattcctgacaggttatgacgtaccctaccgtggatgtatgcagaacgtctacgtcaat
agcaagagagtcttgaacatcatccagagaaacaacaatgcaatcattggagaagtcaca
tgggattgcagtccagagtttgaggccaacagggacgacccgttcagttttgtgaaagac
acttctttcatttcattccagaaatggttgatgagaacacatggtagcatacaattttgg
ttgagaacttcttcacagagtggccttttgctcttcaatcatggaaagggaggtagtttt
ttcgccacagagctctggaagggaaggttacggattcttttcaacgggggaggagacact
tctggcatcttgtcttccgtcagcctagatgatggcaagtggcattttctgaaattgtct
gtatcgcaaagagagttagaaattagtatcgatttggatccagagacatttcctcttgat
gaagcattaagtttcagctttaccggttacttgtatatcggtggggttgttcatcgtgca
agacagcaggcagttacggtaggtctccactccatcgttcatccaacatctgggggttcc
tttgaaggctgcatgcgtgacatcgaactggacaatgagcagttaacgttaggtgatact
caagtcactcatgggatcgaagtaggttgtgtgtaccagtttccttgttctgatcaacca
tgcgttaacaggaacgatgtttgtcacgacatcggcatctccgagtatgaatgcgtatgt
ccgtcctgtcaagtagtgacccctccgaccaataaaagctcatcattaccgtcgctagat
cccaccgctgccaccgatgtagtcagggaggatgcacgaccactttatatggtcagccca
ctctctgtcagtgagggtagtggcgctctcctgaccattgtaaatatacgattaaacttt
aatttagatgacatggacttgcgagagtcccaacttattttccggatggtccagctagcc
aggtatgggagagtcgaaatagacataccagggcgacaggattcggatagatttaccctg
ctcgatctgatagggagaaagataagttacattcatgatggatcggaaaactttagtgac
ttgatagcatttgagatgtctgtgctaggaagaagaagtggagttccatccagacttaga
agcggtatcacgatacaacttcccgtggagattgtgccagtcaatgaccccccgtttctg
gttattgctgaagataattctcttagaattatttccatgaccaggcgacagatcactcca
gagtttctgacagccgaagaccctgatacttcacctgaagatcttgtgtttacaataata
agtcaaccaaatggagttggacagtttgaacttgatgatgatgatgatgttgtcacctca
ttcactcaagcagatgtaaacgagggagaactattctatgtccacacaggcccgcagcag
aagtcgagaattgtcctccgagtgtcagatggcatggaacggagtgatatccaatcgctt
cggatcgaagcgatgccgttgacactaaggcttcaaaattcatctcaactcatgatcaat
cctcagagatcccagctgatcttgccgaagcatttgcaagtggtaacgaatgacccagac
gatgaatttgatgtcactttcagagttgtttctcccacacgatttggtgatattcaaaaa
ttggatagagatagcaataactggtttagtatcaccacttttctccaaagagatatcgac
caacatttattacgttacatcgcttcaagtgctaatggccacacatcagtcgtcgacgat
gaggtcattctgaccgcaagcagtggggatgcttccattgatgtaatatctctgcagatt
caaattgtggtcacaagcattcttatcaggcataatactggcctaatattagacagtgtt
agacatgcaataatatctgattcaaacttgacagttattgcagagaaccctcttttggac
ctacccatgtctatcaatatattgaggattccaatgaaaggggatatgttcttacatcct
aatacaaagcttactgagggaagcaactttacagtggatgacttgaaggataatctagtc
agttatcaggtgcacccccagtatcaagaaggtttcaacgattccttcctctttcaagct
gttttacccaacgctgagagtgaaatacaagtgttcaacatcactttcattccagacctt
caacagctgactgtcatcaatgagggcgtaatagtctctgaaggtggcagtgcgataatt
gaccaggatagcttgttcatttcctcaaaagctacagacgaatttacattcactgtgacc
aagtttccagctcatggtaacttacagttgtatgatggatctaatgtgagaaacagaaac
gtcagctcctttctcagctttgacttgaaatcgaggtctctcagataccaacatgatgat
tcagaatccacgctggacgagttttcattagacgtccgctccacttacatcgacagattc
ggggagcgtaagagcctacactacaacacaacatttaatgttagtatccaactacagaat
gacaatgtccctctgagagtagttgacaaagtctttaaggttcttaagaatggtaaaact
ccactcacagatatggatctcagttaccatgacaacgactcagactttgacgatgctgat
attttttaccaaaggctaacaattcggaacggtgatatcgtgagcgctgacgacgaaagt
cagagagtattaaggtttactcagagagatctcacggagggcaatctcatcttcaagcat
cgtggagatatactcagtacaagggtgacattttttgtctttgataatgacaggagtaac
cttcagagtgctttcctacaaatagaagcctacgaaccgtaccttcaggttgtcaataac
actggcatcgaggtgcaaaaaggaagtcggaaggtaattaacgccagtactctgagcacc
gagagcaatctaaagattcgtgagcacagtatcatttatctggtaacatcccctcctaga
cacggacagatcatgcggtacgatgaatctgtacttcagtttactcaggaagacatccag
acggggataatttcttacattagttccaacgactcttcgtcaagtattcatgactctttc
aacttcaccgttcagggcagagaccttgcaaccaatggcacatttgcaataagaatttat
ctgtccagcactcaaactcttcctacgttggttcaaaatgagacgctctatgtagaagaa
gggaagatggctcttattccaaaatcatctctgaaagtgtctcaccctaatcatccaatg
tcagagatcagctatatcgttagtaaacctccacggtttggcttcttagagttgaaccct
tctgctttgatagatattatgaaccaagacagaaatggtaacttatccacggaagaagcc
cctatcacactttcaagatttactcagttggatattaatagaaagagattggtttatgtt
cagactatctccgaccaatcacaggatacgatagtcttcaatgtaaccaacggttacacc
accataactaatgttacccttcggattgagattgttcccgatacgattccagtcgaaatt
cagaatatgacagtggaggaaggaatgtccaaagtgattctctctgaaaggatcaatgta
tcccatccatattacagagggcaagattttgacatcttcatcgtaactcctccgagatac
gggatcatagagatggtgaactcaaagggaatacctttggcatcattcaccaccaaagat
attcgaaacgagtttgtatattacgtccacaatgggagtgagagccttcacgacagtttt
gaatttattttgaactcaacaagtctaaagaaagagagtgatctgatgtggatgcacatt
tctgtgacccctgttaatgacattccaccatttgtaagcaccaacaaaaacctaatggct
atcaccaatgccagaaccgtcatcaccacagcgtcattgagtgcagaggatgctgattca
tcagatgacgaaattgtcttcctcatcactgtaccgaccaatgggaaggtcgttcttggt
cgtgattcttttagggctgtgtcaaagttcactcaggcagacttggaagtatctcaggtt
ttcttcattcattcaggtgccagatctggtggtttccgatttcaagtatcggacggtctt
cataatacccttcaacagatcttcaccatcacagcccagcctctccttctatctatcgtg
aacaataccgaactcatggtcaaacctgggacccttcaaccaatcacagcaaagcttcta
aaagttataaccaatgagaatccagtgactcacctcagccacccaataacttatgtggtc
acagcagtaccttcatatggaaaacttgtaaaagtcctctctaaagaggcagttacaaat
actttcagttttaaagaagtcatgacattcacacagatggatattgatgacggactgatt
gcatacaagcacaaaaatatcagcgggtctcagaaccctcagcgagatgtcattactttt
gatgttttcctttctctctcccaaaatttaactgatgttaattttcacatatttttgggt
gacaaagctcaaagcacacctccacccacaacattcctattcacgactgctctcctaacc
gcctctcaagatgctcaaacagaaccggccatgttagcaaatgtcgaagtggaggaagga
gaatcagtgaacattactctgagggatcttatttcagcaactggagtagaagaagcagaa
aatactagaattgagttcaacatcacatccatgccatctcacggatcacttgtcatcggt
gagcaggagctacggaaattttcaactttcagagctgccgaagtcgaagaggacggaatc
gtttacaaccacgacgactccgaagagagaggtgactcctttaattttactgtcaaggtg
tcgtctctgatcgacagttcttttcgggtcatatcttccacttcgactcaatttgtggtc
agcatcatccccgtgaatgatcacaactttaaatttttaacgccatacctgaggatgaac
gtgattcaaggagcagaagtattacttacacccaaagttttaaatgtggaggatagagac
aatttcccatcagagattgtctatcacctcttcagccaaccttcaaatggtgagctggtt
tcggcggaggatcccacctctctccttgagacattttctcaggagaatgttaaccaggga
agagttttgtacaaacataacggaggagagaggaccggcgctttcctgtttagggtaacg
gacggttctcatatgcaaatgagacagttttacattacggtcactcacagagcactgtat
gtcaccatgttagatagcattgcattgaggcagggtgcgtccacagtgaccataaaaagt
gacctattcaatataacttccaatagcgaggttgctggaaaagtgcattataatattact
ttgccccctttgtttgggcgtatttcgctgaatggatctgaagtagctagtttctcgcat
tctgatatctctcaaaacatggtaacatacacacagcttgactttgggtcttcgcaagat
cattttaccatgatagcgtatgacgactatgctacatctgaccaaattaatttgacagtc
gctgtacgacctcaggtatttagcgagcagatttctgcccacagtggctcacaagtcagt
cttaccactgtggaactcaatgctacattgttagctgcagtggtatctggtgatatcttt
gtggaagttctgtctgaaggatcacacaccaaattagttgacaatcgtactttggagacg
ctgacaaaatttaattattccagtttgagccaaaatgaaattgccatacttatcgatcat
gttgaaatagccgagaatgaaaccttggtagacctgataactctcaacatctctgccgca
caaactcagtcagttacggtaacactggtgataaatgtgtctgccgcactgatggatcca
acaaccataccgcctcaattaacaacagagaaaaatataatacctcctttgccagctgtg
gagaggaaccgaacaaactttattgacacgtttggtttccctattacaaaaaaggaacca
accacacctcatactactccaattggtgctgcggcacgaaggaaagcggtaggcggagtt
aactttatcctaattttagtccctttgatggtgttgatgataataattgtcgcagtggtt
ctgttcctcgtcttcagaagacagaactctcataaaaatacagaagaaaagccaaagcct
gtcaatggtgacactaaagaggtggagaagccgcctatcgtggctaggcctgtagccaca
tcataccttccacacgtaagtgtcattgccaaccctaacgcaggaactgatcaaaatcac
ttagcaacgcagccaatcatcagccgatcagtacagagccctcttgtaccagaggttaaa
gtcactcctttaggaagaccaccgtctccaaagaattcctacgccagtttgacatcgaat
gggtctgtcaacggtggtaccttaggttacaattggcagacttgtgatccagatttggtg
gatcacttaaaacagtcaaacccttcattacagagaagtcagtactgggtttga
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integrated database retrieval system
