Apostichopus japonicus (Japanese sea cucumber): 139978442
Help
Entry
139978442 CDS
T10891
Name
(RefSeq) complement factor H-like isoform X1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sushi
Zona_pellucida
ZP-N
Motif
Other DBs
NCBI-GeneID:
139978442
NCBI-ProteinID:
XP_071844770
LinkDB
All DBs
Position
13
Genome browser
AA seq
1671 aa
AA seq
DB search
MDNSRRNIINLFRIYVILCTSGAFVTAQTCSPTDCGRPPLNSNTSYTPVQTCYASGERID
YVCTGDLGGPPYNLCANGNWGLPAPTCEVFTCQPPAVDENVKVEPLQSIYDAREAVTFSC
ADGADLIGLSTATCDSQDTWTPATVPICVSVCVAPDIDNGQLNPVNGTFREEDAGQVTCD
IGYSMEAGASSLIVCLGNGTWDQVPQCFSSCTIPEISNSNYQSGITQVVHDTSVTVQCTN
GYSFNQETTFDVTCSDGNLDSSVGEIPSMCHEDCTKRLAPENGNVTSGNLHGDYVEYSCN
TGYYLDGPTSMTCSDGAWNPDESPVCLVVCSPLPLVPNGMVTSANGTLTEGAVAFISCDE
GYFLQPEDAYLISCQSDGSWDESPTCVALCSAPVIENGQLTPANVTFKEGDEAFVMCADG
YMIEGGLSISCQSDGTWTNISRCVAICSAPEITYGDLSPPNATFTDGDEAMVICDPGYSI
EDGSAPTITCQKNGTWTTIPNCREKTCTIPPVENSNVEMGMTINHGENYTIDCNEGYSYD
QRTMFTVVCVHSDLDPDGSVPEACYENCQPRLPPSNGEVTPGTLHCQTVEYSCDPGYALD
GPSASTCNDGRWRPGPPPSCKVICSAPEITYGDLSPPNATFTDGDEAMVICDPGYSIEDG
SAPTITCQKNGTWTTIPNCREKTCTIPPVENSNVEMGMAINHGENYTIDCNEGYSYDQRT
MFTVVCVHSDLDPVGSVPEACYENCPPRSPPSNGEVTPGTLHGQTVEYSCDPGYVLNGPS
ASTCNDGRWRPGPPPSCKAICSAPEITYGDLSPPNATFTEGDEAMVICDPGYSIEDGSAP
IITCQKNGTWTTIPNCRGDICTIPPVENSNVEMGMTINHGENYTIDCNEGYSYDQRTMFT
VVCLHSDLDPVGSVPEACYENCPPRSPPSNGEVTPGTLHGQTVEYSCDPGYALDGPSAST
CNDGRWRPRPRPSCKEFCSIPPVRNSNYPTGANLSDSETVTLVCNEGYSYNQSVTFAATC
IDGRLVHEAILPDACYKDCPLRLIGPPNGDVTDGNRHGVTLQYSCYTGFLLEGPPTTTCV
DGRWIPSQQPRCLVTCEVPNFTNGILMPTNSTFTEGDVALLKCNDGFVLGGASSPALVCL
ENGQWDQYPACIAVCQTPVVDNGKVTPTNTTFMEGDQLQVTCNDGYSLEEGFISPSVCLS
NGTWNRVPTCTPDAICELPAIPRSNYARGGVLEDGEVVLIECNMGFSYNRQARFLVSCNQ
GELDPTTVVPQACYLNCMMLMPPINGHVTMNFRHGSTAEYSCDTGYVLNGPSTTTCFNGR
WVPFRSPTCEPEVPSEEKVSLHCRENVFRIDIPANLLTDQDISSLHLRDESCVGGFDDDG
HFIIESHYDQCGTTQELDEENGQVIYRNLVTNTNELSARSRPPPPPSSPVDIEAECVFDQ
DNQITTNYKLANQLTQSISENGRYNFSFLMYTDDSFSQIRDGPVYVDSDTNLFLKVQLET
DVTGLSLIGSRCWATPTEDVNDANFTNLIVDGCASGPNDVDVKYSLLPSEKPAIAFSVSV
LQFSKVDRVYIHCNARICEKTSPWACLPSCQRNQRKKRASGLMTSYQVTQGPIFKSSSPV
DDDGSGSSRSAMFVSLGASILAVCALFGIMIVSFNRKKSRFDNTENDSFPN
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atggataactcaagaaggaatattattaatttatttagaatttacgtcatattatgtacc
tccggtgcctttgtgacagcccaaacatgttctccaaccgattgtggaaggcctccgttg
aattccaacaccagctatacacctgtccagacatgttacgctagtggggaacgcattgac
tatgtatgtacgggtgacctgggaggacctccttacaacctctgcgccaatggtaactgg
ggtctaccggcgccaacttgtgaagttttcacatgtcagccaccagccgtcgatgagaac
gtcaaggtggaaccattacaaagcatatatgacgcaagagaggccgtaacgttctcctgc
gcggacggagctgatcttatcggactatcaacagctacatgtgactctcaggatacatgg
acgccagctacggtgccaatttgtgtttctgtctgcgtggctccagatatagataatgga
caactaaaccctgtcaacggtaccttcagagaagaagatgcaggacaggttacttgtgat
atcggttattcgatggaggctggtgcttcatctctaatcgtttgtctcgggaatgggacg
tgggatcaagtaccacaatgcttttcatcttgtactattcctgagatctccaactctaac
taccaatcggggattacccaagtggtccatgacacatccgttaccgttcaatgtaccaat
ggttattcctttaatcaggaaacaacctttgatgtaacttgctccgatggtaatctggac
tcgtccgtaggagaaatccccagtatgtgccacgaggactgtactaaaagattggctccc
gagaacgggaacgttacatctggaaatctccatggtgactatgttgaatattcatgtaac
actggttactacttggacggtccgacgtctatgacgtgtagtgatggtgcctggaacccg
gatgagtctccagtctgtcttgtcgtttgtagcccgctacctttagtaccgaacggaatg
gttacatcggcaaatggtacattaacagagggcgctgtggcgttcatatcgtgcgacgaa
ggttacttcctccagccagaggatgcatatcttatttcatgtcagagtgacggaagctgg
gatgaaagtccgacttgtgtagctctctgttctgccccggtgatagaaaatggtcaattg
acaccagctaacgtcacattcaaggagggggatgaggcgtttgtcatgtgtgcagatgga
tacatgatagagggcgggctctcgatctcctgccagagtgatggtacctggacaaacatt
tcaagatgtgtcgccatctgttcagccccagagataacctacggagacttgtctccacct
aacgccactttcacggacggggacgaggctatggtcatatgtgatccagggtattcgata
gaagatggctcggcacccaccattacctgtcagaagaacggcacatggactacgattcca
aactgtcgtgaaaagacttgcacgattccaccagtcgagaactctaatgtcgagatggga
atgaccatcaaccacggggagaattataccatcgactgtaacgagggctactcgtacgat
cagcgtaccatgttcacggttgtatgtgttcacagcgatctagatcctgatggcagcgtt
cctgaggcatgttatgagaactgtcagcctagattaccaccttcaaatggcgaggtgaca
ccgggcacacttcattgccaaaccgttgaatattcatgtgaccctggatacgctctagat
ggtccgtctgcgtctacctgtaatgatgggcgttggaggccaggaccgccgccttcatgc
aaagtcatctgttcagccccagagataacctacggagacttgtctccacctaacgccact
ttcacggacggggacgaggctatggtcatatgtgatccagggtattcgatagaagatggc
tcggcacccaccattacctgtcagaagaacggcacatggactacgattccaaactgtcgt
gaaaagacttgcacgattccaccagtcgagaactctaatgtcgagatgggaatggccatc
aaccacggggagaattataccatcgactgtaacgagggctactcgtacgatcagcgtacc
atgttcacggttgtatgtgttcacagcgatctagatcctgttggcagcgttcctgaggca
tgttatgagaactgtccgcctagatcaccaccttcaaatggcgaggtgacaccgggcaca
cttcatggtcaaaccgttgaatattcatgtgaccctggatacgttctaaatggtccgtct
gcgtctacctgtaatgatgggcgttggaggccaggaccaccgccttcatgcaaagccatc
tgttcagccccagagataacctacggagacttgtctccacctaacgccactttcacggaa
ggggatgaggctatggtcatatgtgatccagggtattcgatagaagacggttcggcacct
atcattacctgtcagaagaacggcacctggactacgattccaaactgtcgtggagacatt
tgcacgataccaccagtcgagaactctaatgtcgagatgggaatgaccatcaaccacggg
gagaattataccatcgactgcaacgagggctactcgtacgatcagcgtaccatgttcacg
gttgtttgtcttcacagcgatctagatcctgttggcagcgttcctgaggcatgttatgag
aactgtccgcctagatcaccaccttcaaatggcgaggtgacaccaggcacacttcatggc
caaaccgttgaatattcatgtgaccctggatacgctctagatggtccgtctgcgtctacc
tgtaatgatgggcgttggaggccaagaccacggccttcatgcaaagaattttgttccatt
cctcctgttcgcaattccaattatccaaccggggctaatctaagcgactcggagactgtt
actctagtgtgtaatgagggatattcttataaccaatcagtaacctttgctgcaacctgc
atcgatgggcggctggtccatgaggctattttacctgatgcttgctacaaggattgccca
ttacgtttgattggaccccctaatggtgacgtcacagacggcaatcgccacggtgttact
cttcaatattcatgttatactggttttcttctcgaaggaccgcccacaactacatgcgta
gatggtagatggataccatctcaacagccacgttgtttagttacttgtgaagttcctaat
tttaccaacggtatattgatgccaactaactccacttttacagagggtgacgttgccctc
ttaaagtgtaatgatggttttgttttgggtggtgcgtcatctccagcattggtttgtctt
gaaaatggacagtgggaccagtacccagcatgcattgcggtctgccaaacaccggtggtt
gataacgggaaggttacacctaccaataccacttttatggagggggatcaactccaggtt
acatgcaatgatggttactctctcgaagaagggttcatttcaccatctgtttgcctcagc
aatggtacctggaatcgagtacccacctgtactccagatgctatttgtgagttacctgct
attcctcgttctaactatgctagaggtggtgtcttggaagatggtgaagtggttcttatt
gaatgtaatatggggttttcctacaacaggcaggctagatttctggtgtcatgtaatcag
ggcgaactggatccaaccacagttgtacctcaggcatgttacttaaattgcatgatgctc
atgccgcctataaatggtcacgtgaccatgaatttcagacatggaagcactgctgaatat
tcatgtgacacgggatatgtactaaatggaccatctacaacaacctgcttcaacggaaga
tgggtaccattccgctccccaacatgtgaaccagaagtaccttccgaggagaaggtctct
ttacactgtcgggagaatgtatttcggattgatattcccgccaatctattgactgatcaa
gacatatcgagcttgcatcttcgtgatgagagttgtgtcggtggttttgacgatgacggt
cactttatcattgaaagtcactatgaccaatgtggaaccacacaggagttagacgaggag
aatggacaggtcatttacaggaatttggtgaccaataccaatgaattatctgctagatcc
cgaccaccaccaccaccatcatcacccgttgacattgaagctgaatgtgtctttgaccag
gacaatcaaatcacaacaaattacaaactggccaatcaacttactcagtcaatctcagaa
aatgggagatacaatttctcttttttgatgtacaccgacgattcattctcacagataaga
gatggaccagtttacgttgattccgataccaacttattcttgaaggttcaactcgagact
gacgtcactggtttatccctcatagggtctcgttgctgggccacgcccaccgaggacgta
aatgacgccaactttacaaatcttatcgtcgatggatgtgcaagcggtcccaatgacgtt
gatgtgaaatacagtctgctgccatctgaaaagcccgccatcgctttctccgtttcggtt
cttcagtttagcaaggtagacagggtttacatccactgtaatgctcggatttgtgagaag
acctcaccgtgggcgtgtcttccatcttgtcagaggaatcaaagaaagaaaagagccagt
ggactgatgacgtcataccaggtcacccagggtccaatctttaagtcctcttcaccagtc
gatgatgatggaagtggaagttctcggtcggcaatgttcgtttcgctgggtgcatctatt
cttgcagtctgtgctttattcgggattatgattgttagctttaatcgcaagaaaagtcga
ttcgacaacacggaaaatgactcttttccaaattaa
DBGET
integrated database retrieval system
