Apostichopus japonicus (Japanese sea cucumber): 139978451
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Entry
139978451 CDS
T10891
Name
(RefSeq) splicing factor Cactin-like isoform X1
KO
K25058
cactin
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajj03041
]
139978451
Spliceosome [BR:
ajj03041
]
Complex C
Other components
Complex C specific factors
139978451
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cactin_mid
CactinC_cactus
DUF5112
Motif
Other DBs
NCBI-GeneID:
139978451
NCBI-ProteinID:
XP_071844796
LinkDB
All DBs
Position
13:2982907..3001268
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AA seq
710 aa
AA seq
DB search
MGKSSEKRKHRKDRRRSRSRSRDRSRESDRDRSYKSQRRSRTPSSSDDSSSDGKRRGRYL
GSPQRKQKSRRERSRSPVKRKKGEHRPLTKEDKIKQKELLKATETLEEKRLRRIQKKEAK
DRKRKEKMGWDEEMMGYTNEDNPFGDPNLLDTFVWQKKNETLGLSQVDPEKLRRMGKGQQ
IENRLELQKVKQRRLEREREREERDKELEDLQRMREAEYFQEWEKQEDQFHLDQAKLRSK
IRIQDGRAKPIDQLAQYIGQEKNEEDLTIEMQEPYNILTGFTIRDLEDLLEDIKVYLEME
KHTNLEFWKDITTITDDELAKLRKIDPDSQIAQDRREGINASVSREVGGIFQGKTHSQLV
ALQNQINERIKSGSAVDIGYWETLLQQLSSHMARARLKERHQDRLRNKLAILRQQQGVEA
AALFPSVLPINSGEGPSTSASTSAESLESKNKTEEIDPDEEPRDPRNERKAERNPEKEEE
EEEEEDEERSAVLTEEDLIAESMEEYLQGSYSPKLTDPKDVSFDVMVYDPEEDMAKLEQA
RKQLLATGSAEATMESEFIKKAKEGMGLDEGTFGVEMALDDKPYLWADKYRPRKPRYFNR
VHTGFEWNKYNQTHYDMDNPPPKVVQGYKFNIFYPDLIDKRNTPEYSLSPSPDNKEFAIL
TFNAGPPYEDLAFKIVNREWELSHRHGFRCQFNNSIFQLWFRFKRYRYRR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtcttcagaaaagcgtaaacatcgaaaggatcggcgtaggtcgagatcacga
agcagagatcgatccagagagtctgatagggaccgatcatataaatcacagagaagaagt
agaactccatcaagctcagatgacagcagtagtgatggtaaacgtcgtggccggtattta
ggctcaccgcagaggaagcaaaaatccaggagggaacgatctagatctcctgtgaaacga
aagaagggagaacataggccattgacgaaagaagacaaaataaagcagaaagaactttta
aaggcaacagaaacactggaggaaaaacgcctcagaagaattcaaaagaaggaagcaaaa
gatcgcaaaaggaaagaaaaaatgggatgggatgaagaaatgatgggttatacgaatgaa
gataatccatttggtgatccaaatctcttggacacatttgtctggcaaaagaaaaatgaa
actcttggattgtcccaagttgatccggagaagctcagaagaatgggaaagggacaacag
attgaaaataggttggaactccaaaaagtgaagcagagaagattggagagggaaagagag
agagaagaaagggacaaggaactggaggatttacagaggatgagagaagcagaatacttc
caagaatgggagaaacaagaggaccagtttcatcttgatcaagccaagctgcgttcaaaa
attcgtattcaggatggcagagcgaaaccaatcgatcaattagcccagtacatcggtcaa
gagaagaacgaggaagacttgaccattgagatgcaggaaccgtacaatatactgaccggt
tttacaatccgtgatttggaagatttactagaagatatcaaagtttacttagaaatggaa
aaacataccaacttggaattttggaaggacatcacaacaattacagacgatgaattagcc
aaacttcggaagatcgatccagacagtcagatcgcacaagatcgccgtgagggcattaat
gcatcagtgagtagagaagttggagggatctttcaagggaaaacacacagccagctggta
gctctacagaaccaaatcaacgaacgtatcaagagtggaagtgctgtggatatcggttac
tgggaaacattgttgcaacaactaagttcccatatggctagagcaaggctgaaggaaaga
catcaggacagattgaggaacaaactagccattctacgacagcagcaaggcgtggaagct
gccgccctcttcccatcagttcttccaatcaattctggagaaggaccatctacctctgct
tctacttctgccgaatctttggaaagcaaaaataaaacagaggagattgatcctgatgag
gaaccgagagatccacggaatgagaggaaggcagagagaaatccagagaaggaagaagaa
gaggaggaagaagaagatgaagagagatcagctgtcttaacagaggaggatctcatcgca
gagagcatggaagaatacttgcagggaagttacagccccaaacttacagatcccaaagac
gtgtctttcgacgtgatggtgtatgatccagaagaagatatggcgaagctggagcaagct
agaaaacagctgttagccactggctcagcagaggctacaatggagagcgagtttataaag
aaagccaaggaaggtatggggttagacgagggcacctttggagtggagatggcactggat
gataagccatatctttgggcagacaagtacaggccaagaaaaccgagatatttcaacaga
gtccacacgggatttgaatggaataaatacaaccagactcattacgacatggacaaccct
ccaccaaaggttgtgcagggctacaagtttaatatattttatcctgatctgattgacaag
agaaatacacccgagtactctctatcaccgagcccagacaacaaagaatttgccatattg
acgttcaatgctggaccaccctatgaggaccttgctttcaagatagtcaatcgtgagtgg
gagttgtctcatcgccatggtttcaggtgtcagttcaacaacagtatcttccagctctgg
tttcgtttcaaacggtatcgttacagaaggtag
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