Apostichopus japonicus (Japanese sea cucumber): 139978564
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Entry
139978564 CDS
T10891
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139978564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ajj03009
]
139978564
Ribosome biogenesis [BR:
ajj03009
]
Eukaryotic type
Pre-60S particles
GTPases
139978564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
GTP_EFTU_D2
EFG_III
EF-G_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
139978564
NCBI-ProteinID:
XP_071844977
LinkDB
All DBs
Position
13:complement(20813735..20834397)
Genome browser
AA seq
1239 aa
AA seq
DB search
MRFVGKQKLVELQKKPVNIRNICILAHVDHGKTTLADSFISSNGIISSRLAGQLRYLDSR
EDEQVRGITMKSSAIALGFVRENEEYLVNLIDTPGHVDFSSEVSTAVRLCDGALVVVDVV
EGVSPQTHVVLHQAWLEDIKPCLVLNKLDRLITELRFTPLEAYLHLQQILEQVNAVMGNL
FASDILEQASSRITKLEEDQIRPSQLESQTFDWSSGLEDTDDSSIYFSPKEGNVIFGSAL
DGWGFGIEQFADQYAKKLGVSKDVLLKTLWGDFYLNSKTMRVMKGAQAKGKKPLFVQFVL
ENLWAVYDAVILNSDKSKTEKIIKSLEIKLGPRELKQQDTKLQLKAILNKWLPVTTCALN
MVCLQLPNPTEMSEKRIEKLLCSSGRRFDSLPENSQKLKAGFQNLQGSTNSPVVAFISKM
FAIDKKFLPRNKQRPLTTEQIAQRRQEVRRLHQERQNLTRSQNSDEITDETTKSSVIENG
KNETGGEEEDTTENDENNGQVFIAFARIFSGVIRKGQKVYVMGPQYDPQEGLKEEEDGEW
RKHIHEVIVTDLYLLMGRDLEDVDEVPAGNVFGMGGLEDIVYKSGTVSSTLACPAFTDMN
FAAKPIVRVAVEPKHLSDMPILINGMKLLNQADSSVEVFVQETGEHVLVAAGEVHLGKCL
KDLRERFALIELDVSVPIVPFRETVIPQPKVDMVNEVIGDVNTVQIPKQFLEELQTEGTE
VTKDGGIEVITPNKIHKFRLRALPLPSTVVTLLESHAELLQILDNRSTAMLTGKVETGKS
QILNQKTIARLEGLKQVLSSSFDEAGRKWKDVCDKIWSFGPRRCGPNILVNSVPGYERPS
IWNCLRDAKETDPSVVRDFDSCIVGGFQLVTLSGPMCDEPMMGVCFVVESWEVKEKGSEK
RPTNVKGRKRNYLPANAEKSNNKPNLGSSETGIQSGECERSKSERNERIDLHRDIEIKTS
KLRGNAGRSLLATSSETEEERGLTQSQESEKCSSEVRKDENVSWSTDISGDDLSKTETIP
DTESAACKLSNETPDEENEGLVSTESGSTTVDRGNSYDAKRNSRWESSNLQVYGPTSGQI
ISTIKEGCRAAFQVQPQRLMAAMYKCNIQATADVLGPLYSVVGKRFGKVLQEEMREGSAI
FDILTTLPVAESFGFPEEIRKKTSGLASPQLFFSHWEVVPGDPYWVPSTEEELLHFGDKA
DSVSQARRYIDGVRRRKGLHVREHIVEHAEKQRTLSKNK
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttgttgggaaacagaaactcgtagagctacaaaagaagccagtaaacataaga
aacatatgtatcttagcccatgttgaccatggaaagacaaccctagctgattctttcatt
tcgagcaatggcatcatatcatcccggttggcaggacagttacgttaccttgacagccga
gaggacgaacaagtccgagggattactatgaagtcgagtgcaatagctttaggatttgtc
agagagaatgaagagtatttagttaaccttatagacactcctggtcacgttgacttctcc
agtgaagtgtctacagcagtgcggctctgtgatggtgccctggtggttgtcgatgtggtt
gaaggagtcagccctcagactcatgttgtcctacaccaggcgtggctagaggacatcaaa
ccgtgcctggtgcttaacaagcttgatcggttgattacggagttgaggtttacccctttg
gaggcctatcttcatctacagcagatattggaacaggtcaacgctgtgatgggaaatctc
tttgcctctgatatcctggaacaagcatcctctagaataacaaaactggaagaggaccag
atcagaccgtctcaacttgaaagtcaaacgttcgattggagctcagggttggaagacaca
gacgattccagcatatacttttcgccgaaagaaggaaatgtcatatttgggagcgcgtta
gatggttggggatttgggattgagcaatttgcagatcaatatgccaaaaaactgggggtg
tctaaagatgtcctcttaaagaccctgtggggagacttctatcttaactccaagaccatg
agggtaatgaaaggtgctcaggccaaagggaagaaacctctgtttgtgcagtttgttctg
gagaatctttgggcagtctacgacgctgtgattctgaacagcgataagagtaagacggag
aaaatcatcaaatccctggagatcaaactgggacctagagagttgaaacagcaggatacc
aaactgcaactgaaggccattttgaataaatggctgcccgtgacgacatgcgcgttgaat
atggtctgcttgcagcttcccaatcccacggagatgagcgagaaaagaattgagaaattg
ctctgttccagtggaaggaggtttgactctttaccagaaaactctcaaaaactgaaagct
ggtttccagaatctccaaggtagcacaaattctccagtggttgcatttatctcaaagatg
tttgccatcgacaagaagtttcttccacggaacaaacaaaggccgttaacaacagaacag
atagcccaacgtcgacaggaagttagacgcttgcatcaggagagacaaaatttgacgaga
tcacaaaactcagatgaaatcacggatgaaactacaaagtcgtccgtgattgaaaatggg
aaaaatgaaactggaggagaggaggaggataccacagagaatgatgaaaacaacggccaa
gtgttcatagcattcgcacggatcttcagcggtgttataagaaagggccagaaggtgtac
gtgatggggccgcagtatgatcctcaagaggggctcaaagaggaagaggacggtgaatgg
agaaaacatattcatgaagtgatcgttaccgatctgtacctgctgatgggacgagatctg
gaagatgtggatgaagtccctgctggaaacgtgtttggtatgggtggtttagaagacatt
gtatataagtctggtactgtctcaagcacactggcctgtccagctttcaccgacatgaac
tttgccgccaagccgatcgtgagagtcgctgtggaaccgaagcatctgagtgatatgcca
attctcatcaacggtatgaaactactgaaccaagctgactctagtgtcgaagtcttcgta
caggagactggagaacatgtcttggtcgcagctggtgaggtgcatcttgggaaatgttta
aaagacctaagagaaagatttgccttgatcgagctcgacgtatctgtcccgatcgttcca
tttcgcgagacggtcatcccgcagcccaaagtggacatggtcaacgaagtcatcggagat
gtcaacactgtccagataccgaagcagtttctggaagaactgcagacggagggcacggag
gtcacgaaagacggaggcatcgaggtgatcaccccgaacaagatccacaagtttcgactg
cgggcgttgccgctaccgtcgaccgtcgtgactctcttggaaagtcacgcggaacttcta
cagattctcgacaatcggtcgacggcaatgctcacgggaaaagtggaaacaggcaagtca
cagatcctgaatcagaagacgatcgcgcgactggagggattgaagcaagttctctcgtct
tcgttcgacgaagccggtcgaaaatggaaagacgtctgcgataagatctggtcctttggc
cccaggaggtgcggtcccaatattctggtgaactcggtccctggctatgagaggccatcg
atttggaactgcctgagagacgccaaggagacagacccgagcgtagttcgcgattttgac
agttgcatcgtcggcggtttccagctggtcacgctgagcggcccgatgtgcgacgaaccc
atgatgggggtctgcttcgtcgtggaaagttgggaagtgaaggagaagggaagtgagaag
agaccaactaacgttaaaggtaggaagaggaactatttgccagccaatgcagaaaaatca
aacaacaagccaaatttaggttccagtgaaacaggtatacagagcggcgaatgtgagagg
tccaaatcagaacgcaatgaaagaatagatttgcatcgggacatcgaaataaagactagc
aaattacgaggaaatgcggggagaagtttattagcaacctcttctgaaactgaagaggag
agaggtttaacgcaatcccaggagagtgaaaagtgttcctcagaggtacgaaaggatgaa
aacgtatcgtggtcgaccgacatctcaggtgacgacttgtcgaagactgagactattcct
gacacagaaagtgcagcatgtaaactgtcgaacgagactccagatgaagaaaacgagggc
cttgtgtcgacagagagtggatcaactaccgtggatagagggaactcctacgatgctaaa
aggaatagcagatgggaatctagcaatttacaagtctatggcccaacatctggtcagatc
atttcgaccattaaagagggctgccgggctgctttccaggtgcagccccagaggctgatg
gctgcaatgtacaagtgcaatattcaagccactgccgatgtccttggtcctctctatagc
gtggtcggtaagaggttcggcaaggtcctgcaggaggagatgagggagggctccgccatc
ttcgatatcctgacgacgctgcccgttgccgagagttttggctttccagaggagatcagg
aagaagaccagtggattggctagtcctcagctcttctttagtcactgggaggtggtaccg
ggagatccttactgggtgccctctactgaagaggaactcctacactttggagataaagca
gactctgtaagccaagccaggcggtacatcgacggagtccgcagaaggaagggtctgcac
gtcagggaacatatagtagaacatgcggaaaaacagaggacgttgagcaagaataagtag
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