Apostichopus japonicus (Japanese sea cucumber): 139978993
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Entry
139978993 CDS
T10891
Name
(RefSeq) focadhesin-like isoform X1
KO
K27498
focadhesin
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
139978993
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GFIT
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NCBI-GeneID:
139978993
NCBI-ProteinID:
XP_071845733
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Position
13:complement(1669926..1702561)
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AA seq
1818 aa
AA seq
DB search
MEDLQKRLQFPSRDVQLAAANKLYAQITNSKELKTLSLPIDDKTKQILELNVLFEVIQGN
NQEASYVCCQSVVALVKNGLLDFRFALNKLVSFIPTAKYGGGLVEGVADLLVLQASLVRQ
LPAADRGGAVFYSMRSPPHPFISMYVSKANLWPDIFQEVSRILSSAELKHWQPLWNMMRP
FFMYILLDPQSAGQTGHTKSSLVSILISLCKDKTEILETVMSFLLTECFPCLQVKTKMAL
HESFMLLDMTAAFLLTSQIGPNHHLLLETITNNIFSIAHQLSTSGEGILSVLTLISKLAT
HDITLLPDTALLDVSCLLLGRCNLREQSILLKLLDDMLSRQSGSSLVIVATVLPLLQTLS
SQQSSVTMDTKLLVSNQRKASQMIYKISKLDIVADCKHESKDQERRESGCSCLPHYCTLH
YLHQLLDSFKDPSKIDVWLSSTRDNLTLYPKNSLKIPAHLLLAAAAIFLQSTGSTELPLQ
VLLDMVERDHAKATLVLSLFLYKFSQKHLTPALTKQLLFAMPELAHHKYALSPILKVVQS
LASTPALSAVGMRLALKLWIKQERCFPQLQTLLSRTGKLVVGSSSVCDEYSISRVATVRD
ICITRPHQHGAELIPTLSKILNDCTKPSEATEAALAMDALKRLSEAEVVDIRTIWMVLAP
KLSQDRRSKVQESICNLLSSVPELAVETDEFEEFREHAVTLLWQRTQHSNPGVINAAYSA
LAEFESEEFYLQDLPEQVISEVKGQEAEVDKSEEQETEEEEEAEDVPGYCFISLLKMLPE
ASRNGFQSLLSSLIQQELATIPRHLNFTITKKEAQSSSLLEKLVDIIPSIIYGKYETNKQ
PGLKPTLAVALLLCYQPKIDKSRGKQGKRHLLSQEQLFLNMLRIILNEIPLSCFTGDPFC
LLLLPSAWTSFMAKVFRATIDAMIAQAAPQGQNSNEDEVPEVEMIVWLKARDKLCDQLKN
VARDNTSANPNCLLALAGLAVVSTQHYLSLGADAGKLVTLAPESVSHQRWLAMVVESLLL
VLDSSYKTNQRIFSWCQKGFRHESKSSKLVAALGLSQIAPMLIAVDANLIDKIIKAICSF
IGIETAPSDREAIDNCSMLPGVAMGLLLNKLSEEKYVEVIGDEALARIVTSLDQLEKLAF
AKDKHSSGAMLGLGMALSAMAADSSLHVGSQVTKVLARLRAAIQGEDIVHLHCTVFGLTI
AMLTASGFDSNIVTSTEAESIVTELVKLSREHTGVRSSVGLLGHSLCVAAHPTADTIIMS
SVREWKATLNSNDSSTEQQVDAIDGLVGFISGLGPLFSPSGTANFKTEAEQEMVQIIKLT
EQLVVECQDLRLQAPLLVGLGTFSFVKSCSQRHKGAVPANYEYLSEDSLLRACAELLQDG
AQRGPEVVPSWQLEIVCAALTGSGSNSLPPVNWAILIGPLLRLPFGPHMQYCLVELALSQ
CPSSHNASLFLSSWISTASLYNSLEVETKRLLLLSLPVLAQHLPVNKVKSFLFSLVLPEV
ISRDSEVSIVTLRGLLGALRLTEPPQSVMQLLHEFTEKMFDSLTVESLVNPQSTFKLLAE
CLVYLPSEMIDVVSHPAQEGNLVKSTLLRSYLIGCGRQSMAWLNACIDVGMNMSSEENHA
CLIICLSRGLLQCSTRIEGQPQTKYTSVAARMQWLVELMGHSHNVASGKTQLKEGRTVSQ
ATRFLFRLFCCVVAVWCCPQSPILLGVAPFGQLQIPDDPRQWPEGDDEAAVSFCSHKDED
AIVRGCVDVVTDSVLSLLETTPWSQVTAKVLQWLIAMHNVPAGNLHPEYQEKIKAVCCAL
RHQTEFKKQIWTTVYSWH
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcttcagaagaggttgcagttccccagcagagatgtccaacttgctgctgcg
aataaactgtatgcacagataactaattctaaggagcttaaaaccttgtccttgcccatt
gatgataaaacaaaacagattctagagttgaatgtgctctttgaagtcatccaaggaaat
aaccaagaagcatcctacgtctgttgtcaatcggtagtggccctcgtcaagaacggcctc
cttgatttcaggtttgcactgaataaacttgtgagtttcatcccgactgctaaatatggc
ggagggttggtagaaggcgtcgccgatctcttagttcttcaggcatctcttgtacgacaa
ctaccagcagctgacaggggtggtgcggttttttactccatgaggtcacctccacatcca
ttcatttcaatgtatgtcagcaaagctaacttgtggcctgatatcttccaagaagtgtcc
cgaattttatcatcagctgaattaaaacattggcagccattgtggaatatgatgaggccc
tttttcatgtacattttattggatcctcagtcagccggtcagactggtcatacgaaatct
tctctcgtctcaatcttaatttccctctgcaaagataaaacagaaatattggaaactgtt
atgtcattcttactgacggaatgctttccatgtcttcaggtaaaaacaaagatggctctt
catgagtcattcatgcttctagatatgacagctgccttcctactcacatcacagatcggt
ccaaaccaccatcttctcttggagaccattactaataacatattttcaattgcacaccaa
ctatcaacatcaggggaaggaatactgtcggtgttgacccttatcagtaaattggcaact
catgatattaccctcctcccagatacagcgttactggatgttagctgtctcttactcggt
agatgcaatctacgcgagcagtctatccttctgaagctattggatgacatgctgtccagg
caatcagggtcaagtttagtaatagttgcaacagtcctgccacttcttcaaaccttgtcc
agtcagcagagctcagttaccatggatacaaagctgttagtatccaatcagaggaaagct
tcacagatgatatataagatatcaaaactggacattgtggcagattgcaaacatgaaagc
aaggatcaagagaggagggaatctggttgttcatgtcttcctcattactgcacactgcat
taccttcatcagttactggattcgtttaaagatccatcaaagattgatgtctggttgagt
tcaacgagagataatctgaccttgtatcccaagaatagcttaaagattcctgcacacttg
ctgctcgctgcggccgccatcttccttcagtcaacgggatctactgaattacccctccag
gttcttttggacatggttgaaagagaccacgctaaggctacacttgtgctctcactgttc
ctgtacaaattctctcagaaacatcttactccagctctaactaagcaactcttgtttgct
atgccagagttggctcatcataagtatgccctctcaccaattctcaaagtggtgcagtca
ctggccagtactccggctctctcggctgtagggatgaggctagctctaaaattgtggata
aaacaggaaagatgttttcctcaacttcagactttgttgtcaagaacaggcaaattggtg
gttggttcctcgagtgtgtgtgacgagtattcaatctcgagggtagctaccgtcagagat
atttgtataaccaggcctcaccagcatggagcagaactgataccaaccctctcaaagatc
ttgaacgactgtacaaaaccatcagaagcgactgaggccgccttggctatggatgctttg
aagcgcctttccgaggctgaggttgtagatatcagaacgatatggatggttcttgcacct
aaactcagtcaagatcgaaggtcaaaggtacaagagagcatttgtaatctgttatcatcg
gtgccagagcttgcggtggaaacagatgaatttgaggagtttcgcgagcatgctgtgact
ttgctgtggcaacggacgcaacattctaaccctggggttatcaatgccgcatattcagct
ttggcagaatttgaaagcgaagaattttatttacaggatttgccagagcaggtgatatca
gaagtcaaaggtcaggaagctgaagttgacaaatctgaggagcaggagacagaggaagaa
gaagaagcagaggatgttcctggttattgcttcatctcacttctcaagatgttaccggaa
gcatctaggaatggtttccagagtttactctcctccctgattcagcaggagttggctacc
attccaagacacctaaactttaccattacaaagaaagaagcccagagctcatccctactg
gaaaaattggttgatatcattccgtccataatctacggcaaatatgaaacaaacaaacag
ccaggacttaaacctactctagcagtggctcttctgctctgctaccaaccaaagattgac
aagtcccgaggcaagcaaggaaagcgacacttactcagtcaagaacaactctttctgaac
atgttacgaatcatcttgaatgagattcccctctcgtgtttcacaggagatccattctgt
ctattgctgcttccgtctgcctggacctcatttatggcgaaagtcttccgtgccactatt
gatgcaatgattgctcaagctgcccctcaaggtcagaacagtaatgaagatgaggtgcca
gaagtggagatgattgtctggctcaaagctagggataaattatgtgaccagctgaaaaac
gttgctagagataatacttcagcaaatcccaactgtttacttgctttggctgggcttgcc
gtggtgtcaactcaacattacttgagcctcggtgcagatgctggtaaattggtaacgtta
gcaccagaatctgtgagtcatcagagatggcttgccatggttgtcgaatccctgctgtta
gttttagatagctcttataaaacaaaccagagaatcttcagctggtgtcagaagggcttt
agacatgaatccaaaagttccaaactggtggcagcgttgggattatcacagattgcacca
atgttgattgctgtcgatgcgaatcttattgataaaatcattaaagcgatctgttcattc
atcgggattgagacagccccctctgacagagaagccattgataattgttctatgctacct
ggtgtcgctatgggcctgttactgaataaactatctgaagagaaatatgtggaagtgatc
ggagatgaggccctggcaaggattgtcacttctttagatcagcttgaaaagcttgctttt
gccaaggataagcacagctctggtgccatgttgggactgggaatggcattatcagcgatg
gcagcagatagctcccttcatgtaggttcgcaagttactaaagtgctagccagactgagg
gcagcaatacaaggagaggatatcgttcaccttcattgtacagttttcggtctgacaata
gcgatgttgacagcttccggtttcgacagcaacatagtaacttctacagaagctgaatca
atcgtgacggaactggtgaaattatcgagggagcatacaggtgtgagatccagtgtagga
cttcttggtcacagtttatgtgtagctgctcatcccaccgccgacaccatcatcatgtca
agtgtgagagaatggaaagcaacgttaaatagcaatgattcttctacagagcaacaggtc
gatgctatcgatgggcttgtgggcttcatttcaggactaggtccattattcagtcccagt
gggactgctaacttcaagactgaagcagaacaagaaatggtccagataatcaaactcact
gagcagctcgttgtagaatgtcaggatctgaggttgcaagctccattactggtagggtta
ggaacgttctccttcgtcaagtcatgctcacaacgccataaaggagcagtacctgctaac
tatgaatacctttctgaggatagtctgcttcgggcctgtgctgaattgttacaagacgga
gctcaacgaggaccagaggtggtaccttcgtggcagttggaaattgtatgtgctgccctc
actggtagtggatccaattctctcccaccagtaaattgggcgatactgatcgggccactt
ttgaggctaccattcggtccacacatgcagtactgcctggtagagctggcactctctcag
tgtccatcttcccataatgcatcactcttcctctcatcatggatatcaacagcctctctt
tacaacagtttagaagtagaaacaaaacgtctgttgttgctttcgctgccagttcttgct
cagcatcttcctgtaaacaaagtgaagagtttcctcttcagtctcgttctgccggaagtt
attagcagagattcagaggtctccatcgtcaccctcaggggtctgctgggtgctctgagg
ttaacagagccccctcagtcagtcatgcagttactccatgaattcacagaaaagatgttt
gatagcttgacggtagaaagtctggttaacccacagtctacctttaagcttcttgctgag
tgccttgtataccttcccagtgaaatgattgatgttgttagccaccctgctcaggaaggt
aacttagtgaagtcaacacttttacggtcctacttaatcggatgtggtaggcagtcaatg
gcttggctgaatgcctgtatagatgtaggaatgaacatgtcctcagaggagaatcatgcc
tgcctcatcatatgtctgagcagaggtttactccaatgtagtactcggattgagggccaa
ccacagactaagtacacatcagtggctgccagaatgcagtggttggtggaattaatggga
catagtcacaatgtagcgtcaggaaaaacacaattgaaagagggaagaacagtgtctcaa
gccaccagatttctttttcgattgttctgctgtgtagtagcggtgtggtgctgcccccag
tcacccattctcctaggagtagcacccttcggccagctccaaatacccgatgatcccaga
cagtggcctgaaggtgacgatgaggcagcagtttctttctgctcccacaaagatgaggat
gccattgtcagaggctgtgttgacgtggtgactgattcagtgttaagtctgttggagacg
acaccttggagtcaggtcactgcaaaggtcttacaatggttaatagccatgcacaatgta
ccagctggaaatctccatccagaatatcaagaaaagattaaagctgtttgttgtgccttg
cgacatcagacggagtttaagaagcaaatctggaccacagtgtacagttggcattga
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integrated database retrieval system
