Apostichopus japonicus (Japanese sea cucumber): 139979127
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Entry
139979127 CDS
T10891
Name
(RefSeq) retinal homeobox protein Rx1-like
KO
K09332
retina and anterior neural fold homeobox protein
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ajj03000
]
139979127
Transcription factors [BR:
ajj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
139979127
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Nucleo_P87
FAM176
Motif
Other DBs
NCBI-GeneID:
139979127
NCBI-ProteinID:
XP_071845923
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All DBs
Position
13:complement(21456381..21466410)
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AA seq
338 aa
AA seq
DB search
MHAEGFFGPSPRIYNQRAHNAMALGDHTVGVPDSSPVVVESVDGEEPVKQRSSYSIDAIL
GLRQPEQSRSDQAFAPAEKPDLTPRSSPVLSGEISPKVSNVPLKQKHISSSSSSSTNRQT
PEKRKRSTDEEADDESDDADNENMKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREEL
AMKVNLPEVRVQVWFQNRRAKWRRQEKMESATLKLTENTYPAIRGSIPPQAGLSLEPWMA
SSVLNHSPTLTRYPTALTSPSALPLSNGTLSDGLTYLSPSAISYINSGHIPCFPPGMGIV
SNYMEDVTSNLTSMRLKAHEHAGSLNKYQETAQDEQRR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcatgccgaaggatttttcggtccttcgccgcgaatttacaatcaaagagcacacaac
gccatggctcttggagatcacactgtaggggttccagattcaagcccggttgttgtggaa
tctgtcgacggggaagaaccggtcaaacagagaagcagttactccatcgacgcaattttg
ggcttacgacaaccagaacaatctagatccgatcaagcattcgctccggccgagaaacca
gatttaacccccaggagctccccggtactctctggtgaaatatcaccgaaggtttcaaat
gtccccctcaaacagaaacatatctcatcctcctcttcctcctccaccaaccgacagaca
ccagagaagaggaaacggagcacggatgaggaggctgatgatgaaagcgatgacgcggac
aatgaaaatatgaaaaaacatcgccgaaaccgaaccacttttaccacttatcaacttcac
gaactagagagggcgttcgaaaaatcacattatcctgatgtttatagccgagaagaacta
gccatgaaggtcaacttaccggaagtgagggttcaggtttggtttcaaaaccgacgagca
aaatggcggcgtcaagagaaaatggaatcagctactttgaagttaacagagaatacatat
ccagccataaggggaagtattcccccacaagcagggttgtctttagaaccatggatggcc
tcttctgtcctgaatcattcacccacattaaccaggtacccaactgctttgacgtcaccg
tccgctctgcctcttagtaacggaacattatccgatgggttgacatatctaagcccgtcc
gcaatatcgtacataaactccggtcatattccatgttttcctcctggaatgggtatcgtt
tcgaactatatggaagatgtgacgtcaaatctgacgtcaatgaggctaaaggcgcatgag
cacgccggaagtttgaacaaatatcaagaaactgcccaagacgaacaacgtcgctga
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