Apostichopus japonicus (Japanese sea cucumber): 139979166
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Entry
139979166 CDS
T10891
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139979166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ajj04121
]
139979166
Ubiquitin system [BR:
ajj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
139979166
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Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
139979166
NCBI-ProteinID:
XP_071845986
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Position
13:24752554..24758708
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AA seq
587 aa
AA seq
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MNPSDRFSSDGQSTLKARKIPNQNIVYRLRQREVNRSKVASDFHLGRSFHQNVFPNFTVV
NVEKPPCFLRKFSPDGHFFIAFSADQTSLEIFRFNGAQAGGDLLQRIHSSKPDLADEEAA
NVRGDLFSRYFHHTHTVNVAPSGEHLNRECSLFTDDGKYVIVGSACYIPNEPHPLFFEVY
RNNESVSPNPRSPLEDYSLHIVDLQTGLLSDTRKFHCDKVFLSHNQGLYLYHSTLAVLSV
QQQTIYIFQITPEGTFIDVRTIGRFCYEDDALILSPYLQPQPSNSQTFRPFRDPCINSLK
HRLLSFLWQRAHKDGTPDAMRHFYKYFDCIRWLRMWKIQLLDVEHLLIKCASEDVVTLRV
QDPNSQPSFFVVYNMVSTEVVAVFENTSEDLLEFFEHFSDLFRNATLHAPIQFTCSSSNN
IHARQIHRRFKHTIINAKYGGQLEAVKRLLAQLPISSQSYTSSPYLDLSLFSYDDKWVSV
MERPKICGDYPIKFYARDSGILRFKIFPGLLTRSSSSSLRRLVAFTFHPYEPFAISVQRT
NTEYVVNFHVRHQPNMAWDEKEVRSAPPVKGFEVPVAPFTSARNLSR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatctgacagattctctagtgatggtcagtcaaccctaaaagctcgaaaaatc
ccgaaccaaaacattgtctacagactgagacaacgggaggtgaacagaagtaaagtagcg
tctgattttcatcttggccgttctttccaccaaaatgtatttccaaacttcaccgttgtg
aatgttgagaaaccaccttgctttctgagaaagttttcacctgacggtcactttttcatc
gccttttctgccgatcaaacctcacttgaaatattccgcttcaacggagctcaggccggt
ggggatctccttcagcgaatccactctagtaagcccgatttggccgacgaagaggcggcc
aatgttcgtggcgacttattctccagatactttcaccatactcacacggtcaatgtagca
ccgagcggagaacatttaaatcgagaatgtagcctcttcaccgacgacgggaaatacgtc
atcgttggatctgcgtgctacattcccaacgaaccccacccgttattctttgaggtttac
aggaataacgagtctgtttcacccaacccccgctcccccttggaagactattccttacac
atagtggacttacagactggtctgttgagtgacaccagaaagtttcattgtgacaaggtc
tttctgtctcataaccagggcctttatctatatcatagtacattagcagtgctctcagtg
cagcaacagaccatttacatctttcagatcactccggagggcactttcatcgacgtacgg
acgataggccgattctgctacgaagacgacgctctgatcctgtcaccctatctgcaacca
caaccaagcaattctcaaacgttccgtcctttccgcgatccgtgtatcaattccctgaag
caccgcctgctgtccttcttgtggcagagagcacacaaggatggaacacctgatgccatg
aggcatttctataagtactttgattgtatacggtggctgagaatgtggaagatacagtta
ctcgatgtggagcacttgctcatcaagtgtgccagcgaagacgtggtgacgttgagagtc
caggatccaaattctcagccgtctttctttgtcgtgtacaatatggtcagcacggaggtg
gtggcggtcttcgagaatacctcggaagatctgctagagttctttgaacacttcagcgac
ctttttcgcaacgccaccctccacgcacccattcagttcacctgttcttcctctaataat
attcacgcccgtcagatccaccgacggttcaagcacaccatcatcaacgccaaatacggt
ggccagctggaagcggtcaaacgcctccttgctcagctacccatcagctcacagtcatac
actagcagcccttatctggacctgtctctcttcagctacgatgataaatgggtctcggtg
atggagcggccaaagatttgtggcgattacccaataaagttctatgcaagagactcgggc
atcttgaggttcaagatctttccaggtctcctgacgagatcgtcgagttcgtcgcttcgc
agactggtggctttcactttccacccctatgagccattcgccatctcagttcagagaacc
aatacagaatatgtcgttaatttccacgtccgtcatcagcctaacatggcgtgggatgaa
aaggaggtcaggtcagctcctccagtcaaaggttttgaggttccggtcgctccgttcacc
tcagcgcgtaatttatccaggtag
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