Apostichopus japonicus (Japanese sea cucumber): 139979395
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Entry
139979395 CDS
T10891
Name
(RefSeq) nuclear pore complex protein Nup54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139979395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139979395
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139979395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
139979395
NCBI-ProteinID:
XP_071846251
LinkDB
All DBs
Position
14:2720518..2743232
Genome browser
AA seq
531 aa
AA seq
DB search
MSFNFGKPSGGFGTTGGFNFGSSGTSGTTGGFSFGSKPAGTATTSAGGFSFGSGLAAPTT
TSGFNFSSTLAPTTASSGFNFGSTFGGFGSTTKSTAPSLFGGSFGTTTTASSGLNFGNTS
TTGGFGTSGIGGQSQQQQNQAVNTDLVQLVSALSVPAIYGDERDTIITKWNQLQAFWGTG
KGYVNQSSTVNFTPENPFNRFKTVGYSIKPKSRNSDGLVVLVLNKSEADVRNNQQQLVDS
LFRVLGGKPTLSVCVEDVKSVPVNKCEVTIYIMERLANGITKRLSAQIAYNVFNQASVQA
QLGSLGVVRIAPKIQISSSQLQEYLNHPPLGYDPNLWKQAQLDNPDPSSLIPVPLVGFET
LKSRLEQQAQFTKQHQARLEQTGKQLEELEQEKNTLLARLPEARRKHQDLTHRLLQVFVK
QEVQRKRGVAFQLEEEQLRTQVEALFAEINAPTQLKGRLNEMLSHIRLHSQGSYGRLEEP
YELTLDMQQEIKLHLKQQQEGIGHLVEVLKDDLEDLKLIEQDMAEVMTYRR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaatttcggtaaacccagtggaggatttggaaccacaggtggttttaacttt
gggtcatctggaaccagtggtaccacaggtgggtttagtttcggctcaaaaccagcaggg
acggccaccaccagtgctggaggattctcgttcggatctggtttggctgcccctacaaca
acatctggattcaactttagctccactttggcacctacaactgcatcaagtggtttcaat
tttggttcaacatttggtggttttggctcaaccacaaaaagtactgcaccttctctgttt
ggagggagctttggtacaaccacaacagcatcatctggattaaattttggcaacacatcc
accacaggtggttttggtacctctggtattggtggtcaaagtcaacagcagcaaaatcaa
gctgttaacacagacctggtgcagcttgtttcagctctatcagtgccagccatctatggt
gatgagagagatactatcattacaaaatggaaccagctacaagcattttggggcacagga
aaaggttatgtcaatcaaagtagtactgtcaacttcacaccagaaaacccattcaacaga
ttcaagaccgttggttacagcatcaaaccgaagtcccgtaattctgatggactggttgtt
cttgtactgaataagagtgaagctgatgttcgcaacaaccagcaacagttggtggattcc
ttattccgtgtccttggaggtaaaccaaccttgtctgtgtgtgtagaagatgtgaagtca
gtcccagtcaacaagtgtgaggtcaccatctacatcatggagagattggctaatggaata
acgaagagactttcagctcaaatcgcttacaatgtctttaatcaagccagtgtacaagca
cagcttggcagtcttggtgtggtgaggattgctccaaagattcagatttctagctcacaa
ctgcaagagtatctaaatcacccacctctaggttatgaccctaatttgtggaagcaggca
caacttgataacccagatccaagcagtcttattccagttccccttgttgggtttgaaacc
cttaaatccagactagagcaacaggctcagtttacaaagcagcaccaggcaagacttgag
caaactggtaaacaattagaagagttggagcaagagaagaacactctactggcaaggtta
ccagaagccagaagaaaacatcaagacctaactcacaggttgttgcaggtttttgtcaaa
caagaggttcaacgaaagagaggggtagcctttcaactagaggaagaacaactgaggaca
caagtagaagccttatttgcagaaatcaatgccccaacacagctcaaaggtcgcttgaat
gaaatgttgtcacatatccgacttcatagtcaaggctcgtacggaagactagaagaacca
tatgagctgactttggacatgcagcaggaaattaagttgcatctgaagcaacaacaggaa
ggaataggtcacttggtagaggtcctaaaggatgacctggaggacctgaaactgattgaa
caagacatggcagaggtcatgacctatagaagatga
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integrated database retrieval system
