Apostichopus japonicus (Japanese sea cucumber): 139979542
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Entry
139979542 CDS
T10891
Name
(RefSeq) probable cysteine--tRNA ligase, mitochondrial isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139979542
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ajj01007
]
139979542
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ajj03016
]
139979542
Enzymes [BR:
ajj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
139979542
Amino acid related enzymes [BR:
ajj01007
]
Aminoacyl-tRNA synthetase
Class I (G)
139979542
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
139979542
Prokaryotic type
139979542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1f
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
139979542
NCBI-ProteinID:
XP_071846560
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All DBs
Position
14:16419820..16434643
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AA seq
589 aa
AA seq
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MLPLFVEKRLVMAGPLRCCRVFTTWNIQTRSIGFSSRCLCSKQEQWSTPSGYDTGVKVQN
TLCEKVKGDSLVPLILPHGKLARWYACGPTVYDAAHIGHASSYIRFDIIRRILETFYDIR
VIQVMGITDIDDKIIKRANERSEDFQVLTRREEKRFLEDMTAMKVQPAAHYTRVTDHIPA
ILNFITRIINNGYAYATPSGSVYFDVKSFGADRYGKLHRHDTDIYDIQETEKSEKRHPND
FALWKAAKEGEPWWTSPWGPGKGRPGWHIECSAMSSAIFGESLDIHTGGIDLAFPHHTNE
IAQCEGCFETNQWANYFLHAGHLFLKRDSDKMSKSLGNVISVPEFLESYTANHFRTLCLL
MRYNHNIEYGEDSLSKAVSTTNQITSFLSDSEAYVRGQINSGPVDEALTHQRVSDTSKKV
RQAFANDFDTPRALEAIMDLIKTTNAQLQPSQQSCPCSTRSPVTIAYVSSFVRSTLTSLG
FDLPSREDESSTGYGGSLSSTLDTLVSFRKEVRNWALSTDNATSQAGETPKEQRKRINKE
RSSLLTACDDVRSRLTEDGIQIKDRGQNSTWEFSEKKVNQERQTQDEET
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctatttgtagaaaaaaggttagtaatggctggacccttaagatgttgcagg
gtattcactacttggaatatacaaacaagatcgataggtttttccagtcgatgtttgtgc
tctaagcaggaacagtggagcaccccttctgggtatgacacaggggtcaaagttcagaat
acattgtgtgagaaggtcaaaggagattctttagtccctctaatcttacctcatggaaaa
ttagcaagatggtacgcctgtggaccaactgtttacgatgctgcacatataggacatgct
agttcctacatcagattcgatatcatcagaagaatcttagaaactttttacgacatcaga
gttatccaggtgatgggaataacagatattgacgataagatcataaaacgagctaacgaa
agaagtgaagatttccaagttttaactagaagagaagagaagaggttccttgaggatatg
acagcaatgaaggtacaaccagctgctcattatacaagggttacagatcacataccagct
attctgaatttcattacaagaattataaacaatggctatgcatatgctactccttcagga
agtgtttactttgatgtcaagtcatttggagcagacagatacggtaagctccatcgtcat
gacactgacatatatgacattcaggaaactgaaaagtcagagaaacgtcatcctaacgac
tttgctctctggaaagctgcaaaagagggggaaccttggtggacatctccatggggacca
gggaagggtagacctggttggcatatagaatgttcagctatgtcaagtgcaatatttgga
gaatctctagacattcatactggagggattgatcttgcctttcctcaccatacaaatgaa
attgcccaatgtgaaggctgctttgaaaccaatcagtgggcaaactattttcttcatgcc
ggtcatctgttcctcaagagagattctgataaaatgtccaaatctctcggaaacgtgatt
agtgttcctgagtttcttgaatcttacacagccaatcattttaggactttatgtctgctg
atgagatacaaccacaatattgaatatggtgaggattcgctcagtaaagctgttagtaca
acaaatcaaatcacatcatttcttagtgactctgaggcctatgttagaggccaaattaac
agtggtcctgtggatgaagcacttacacatcaaagggtaagtgataccagcaagaaagtc
agacaagcctttgcaaatgattttgacactccaagagccttggaagctatcatggatctg
ataaaaacaaccaatgctcagctgcaaccatcacaacaatcgtgcccttgctctaccaga
agtcctgttactattgcgtatgtgagttccttcgtacgtagcaccctcacaagtctcggc
tttgatcttccgagcagagaggatgaaagtagtactggttatggagggagcctgagcagt
actctggacacactggtgtctttcaggaaagaggtcaggaactgggctctatcgaccgac
aatgctaccagtcaggcaggagagacaccaaaagagcagaggaagagaattaataaagaa
cgaagctctctactcacagcctgtgatgatgtcagaagtaggttaacagaagatggtata
caaatcaaggacagaggacagaattcgacttgggagttcagtgaaaagaaagttaatcaa
gaacgacagactcaggacgaggaaacgtga
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