Apostichopus japonicus (Japanese sea cucumber): 139979676
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Entry
139979676 CDS
T10891
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2-like isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139979676
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
139979676
Factors involved in mRNA localization
Other mRNA localization factors
139979676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
BP28CT
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
139979676
NCBI-ProteinID:
XP_071846794
LinkDB
All DBs
Position
14:complement(21891450..21925641)
Genome browser
AA seq
1254 aa
AA seq
DB search
MSGGPPISLEDALSNVDLLEELPLPDQQPCIEAAALSITYQPNFDTNFEDRTAFVTGIAK
YTEEATVHSELNKLLDEGETYAVTLYTWRSCSRAMPAIKSNQQPNRVEIYQKFVEVMEPE
VAKLVNFMYFQQRAIDVFCRDIKRLCHSERRKDFVSEAYLLTLGKLINMFAVLDALKNIK
SSIRNDYAAYRRAAQFLRVMADPKTLKESQEVVMFLANNDQITNTLKQNIIKIECYEDLL
CEIVNLCIDHFEGMHYVLPAEKHMLVKVIAFGLFLMDGKDLSIYKMDQKKKISLSRVDKV
FKQLAVVPLYGDIQIPVFTYITKSENYANNKSVWTCDHAATPQYNIIERLPSLREEHAKY
ISALARHSNKEVTTAQKDTARSEKENVALYNLALQGLRLLSRWTSVLTELFSWKLIHPAD
KFSNPSLPEKAEEYERAIRYNYSSKEKFALIELVAMIKGLQVLMNRMEGVFVEAIRQTVY
AEMQDFVQIVLRDPLRFAIKKKKSLIISIIKAVRETCAHWQHGHEPKDDPCLKGEKDPKT
GYSIHVQRITVGPSSTQLYLLRTMLESLIADKSGTGRKTMRKELDVQVVESIERFHKRSF
FYKSMLSFSTVLQESCDISQLWFREFFLEMTMGERIQFPIEMSMPWILTSHILETKEPCM
MEYILYPLDLYSDSAQYSLTKFKKQYLYDEIEAEVNLCFDQLVYKLSEQIFAYYKAVAAS
ILLDKRFRQECLSHGIHIPHPPVNRYETLLRQRHLQLLGRSIDLNRLITQRISTSMQKSL
ELAIARFESSDLTFIVELQNLLEVNRLTHTLLSKYLKLSDFEAMMREANHNVMAPYGRIT
LHVFWELYYDFLPTFCYNAATERFVRTKLMVIEPPSRDKPPTASPAYLFGSKSLNHAYST
INGLYSNFIGAPHFRCLVKLLGYQGIAVVMEELLKIVKGLLQNNICQYVKLLIEVMPPTC
KLPKFDYGTKGIVAYYSANLQSISQYADLKVNVFRHFQEVGNAILFFKLIEQSMAIEEVC
DLIHASPFQNIIPKPHVKQGEKLESKLKRLEQNYAPLHIVNLLEKMGTPEQTTNVREGDL
LTRERLCCGLSMFEVVLQRIKSFLDDPVWKGPEPTNGVINIDECSEFHRLWSAIQFVYCL
PLQQSNYTPEESYGEGLNWAGCTLLTLLDQQKRFEALDFSYHILRVHQVDQLDEDINGIP
IGRLTDRIRKFQILNSQIFSVLNRYLRPGEGDGPAVEQVRCYKPPIHQSVLDGM
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggaccaccaatatccctggaggatgcactctccaatgttgacctgttggag
gagttgcccttaccagaccaacagccatgtattgaagctgctgccctctccattacatat
caaccaaactttgacacaaactttgaagacagaacagcgtttgtcactggtattgcgaaa
tacacagaagaggcaacagtacactctgaactgaacaagttactagatgaaggggagaca
tatgctgtcactctctacacatggaggagctgctccagagctatgcctgctatcaagtca
aaccagcagcctaatcgggttgaaatataccagaagtttgttgaagtcatggagccagaa
gttgccaaactggtcaactttatgtatttccagcaaagagccatcgatgtattctgtagg
gatatcaaacggttgtgtcactctgaaaggaggaaggattttgtttccgaggcttacctt
cttactctgggcaaattaattaacatgttcgctgtgctggacgctctgaagaacatcaaa
tctagcatcagaaatgattatgctgcataccgacgagcggcccagtttcttcgagtgatg
gcagatccgaagactctaaaagaatctcaagaagttgtgatgtttctggccaacaatgat
cagatcacaaacaccctgaagcagaacatcataaagatcgaatgctacgaagatctcctc
tgtgaaattgtcaatctttgcatcgatcactttgaagggatgcattatgtacttccagcg
gaaaaacacatgctcgtaaaggtgatagcatttggtctatttctgatggatggcaaagat
ctcagcatttacaagatggaccagaaaaagaaaatcagcctcagtagagtggataaagtc
ttcaagcaactcgcggtggttcctctgtacggggacattcaaataccggtgttcacctac
atcacaaagagcgagaactacgccaacaacaagtccgtctggacctgcgatcatgccgcc
acgccacagtataacatcatagagagacttccaagtctcagggaggaacacgctaaatat
atcagtgctttagcaagacacagtaacaaggaggtgaccacagctcagaaggatacagct
aggtcagagaaagagaatgttgctctctacaatctggcacttcaaggactccgtctactc
tccagatggacttcggttctcacagaattgttttcttggaagctgatccatccggccgat
aaattctccaatccaagcttaccagagaaagcagaggagtacgagagggccattaggtac
aattacagcagtaaggagaaatttgctctcatagagttggtcgccatgatcaaaggactg
caggtcttaatgaatcgcatggagggcgtcttcgtggaggcgatacgacagaccgtctac
gccgagatgcaagattttgtccagatagtgctcagagatcctcttaggttcgccatcaag
aaaaagaagagtttgattatcagcatcatcaaagctgtgagagagacctgcgcccattgg
cagcacggccacgagccaaaagacgatccctgtctgaagggagagaaagaccccaagacc
ggttacagtatacacgtgcaacggatcacagtcggcccttcaagcactcagctgtatctg
ttgaggacgatgttagagtccttgattgcggacaaaagcggaacaggacgcaagacaatg
aggaaggaactggacgtccaggtggtcgaaagcatcgaaagattccacaagagatcattc
ttctataagtctatgctgagcttttcaactgtcttgcaagagtcttgtgacatctctcag
ctgtggttccgagagttcttcttggagatgaccatgggtgaacgcattcagtttcctatt
gagatgtcaatgccatggattctcaccagccacattctagaaaccaaggaaccctgtatg
atggagtacatactttacccattagatctgtacagcgatagtgcacagtattctctgacc
aaattcaagaaacaatacctctacgatgaaatagaggctgaggtcaacttatgtttcgat
caactggtgtacaagctgagtgagcagatattcgcctactacaaggccgtagcagccagc
atcctcctggataagagattcaggcaagaatgtttgagtcatggaatccacatcccgcat
cctccagtgaacagatacgagacattgctacgacaacggcatctccagcttcttggaaga
tctatcgatctgaatcgattaatcactcagaggattagcacatccatgcagaagagcctg
gagctggccattgcgagattcgagagcagtgacctgacatttatcgtggagttacagaat
cttttggaggttaaccgccttactcacaccctgctctcaaaatacttaaagctgtcagac
tttgaagccatgatgagagaggcgaaccacaatgtcatggctccctacggcagaataaca
ctccacgtcttctgggagttgtattacgacttcttgcctactttttgctacaacgcagcc
acagaaagatttgttcgtaccaaactgatggtcattgaaccaccaagcagggacaagcct
cctacagcctcaccagcctacctctttggaagcaagtctcttaaccatgcttacagcacc
atcaatggcctgtacagtaactttattggagcaccacatttccggtgtctggtgaaattg
ctcggataccagggaatagctgtcgtcatggaagaactactcaagattgtcaaagggctg
ttgcagaataacatctgtcagtacgtaaagttgctgattgaggtgatgcctcccacctgt
aagctacccaagtttgattacggtaccaaaggcatagtggcctactactctgctaacctg
cagtccatctcgcagtatgccgacctcaaggtcaacgtcttccgccacttccaggaagtc
ggtaatgccatcctcttcttcaagctgattgagcagagcatggccatcgaggaagtctgc
gatctcatccacgcttccccttttcagaacatcattccaaaaccccacgtgaagcagggc
gagaaacttgaatccaagttgaagaggctggaacagaactatgctcctctccatatcgtc
aatttactggagaaaatgggaacaccagagcaaactacaaacgtcagagagggtgacctc
ctgaccagggaacgcctatgctgtggactgagcatgtttgaggttgtcctccagcgaatc
aaatccttccttgacgatccagtttggaagggaccagagccaaccaatggggtgatcaac
attgatgagtgctccgagttccataggttgtggagcgctatccagtttgtgtactgtctt
cccctacaacagtccaactacacaccagaagagagctatggagagggtctcaactgggcc
ggatgcacccttctgaccctcctggatcagcagaaacgtttcgaagccctggacttctcc
tatcacatcctgagggtgcatcaagtcgaccaattagacgaagacatcaatggcatccct
atcggtagattaacggacaggatccggaaattccagattctcaacagtcaaatcttttcc
gttctcaatcgttatttgaggccgggagaaggagatggccccgcggtggagcaagtcaga
tgctacaaaccaccgatacaccagtccgttctggacggcatgtag
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