Apostichopus japonicus (Japanese sea cucumber): 139979834
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Entry
139979834 CDS
T10891
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139979834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139979834
03036 Chromosome and associated proteins [BR:
ajj03036
]
139979834
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139979834
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139979834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
VLPT
DUF2336
Motif
Other DBs
NCBI-GeneID:
139979834
NCBI-ProteinID:
XP_071847084
LinkDB
All DBs
Position
14:complement(26647840..26686541)
Genome browser
AA seq
1925 aa
AA seq
DB search
MFGQQNTQFGSSGFGANQTSAFSTPASGGFGTPSAFGAQTPSTNLFGNTANTNTSGGLFG
NNNNNRFGQPNTSSGTGFSFGSNVFGTSNNNTATSTGGGGLFGTPASNSFGTGAFGAKPA
AGFGTNTSGSLFGQQPSSSGSLFGQPTNTASTGIFGASVGGNLFGSSQSGTTIKFQAPNS
QDTMVKNGTTQQVNTRHQVISAMKQYEGKSFEELRLEDYVANRKGGTGTGILGMGMTQQD
SKSSGLFGQANTTSGFTFGTQSKPLFGGATTAGGFGTSGSLFGQTAQPQQQQSGGLFGAA
KPAFGQTTQSSSLFGNTGTGTSLFGQNTQQKTLFGQPTTTPTTTPLFGGGTNTFGATTNT
FGNSSFGQNTFGQPNQTGSLFNKPTGFGTSTGNTGLSFGTQSNSLFGNQSKPGGLTLGGG
TSTGFGTTTDGGLFGNKGTTGFGTGLGTGSTFGSTLGSTFNTGNTGGSLFGNNKTTGFGS
TFGNTGLNLGGGFGSTGLNTGGTNAQLGGNAPSQNAQSQLHLFNLLNSPYGDNPLFKNKL
TEKDAKDGSNKSTSFAGQKPLNIPSHYKVSARQSPSAKPKPHFSNNKSWKAKFFEGLEEE
DPTLSPATFVPRRSVKKLVIKKKLELEDNHVNDSSLFGKTLSTDDDLIERTSIYPERDSD
RDHATDRQKPNQDGGSPRGNPTSSMNQTSPAGVLFSPIEPASSSKEDGDPNCTVSDLNPT
GGSKPTKKSLESSAKVPLRLQESTSDLDQSSFVEVPDELENLPPPHPAGVVLHSQGYYCI
PSLKELASITRDGHCEVENFTIGREGYGSVFFPGVTDISNLNLDEIVYFRRKEITVYPDD
DSKPAEGEGLNKRAEVTLDRTWPVDKSSREPITDIERLNALGYEEKLERATTKLGAKFIE
YRPETGSWVFEVPHFSKYSLQDDDEDDEVVPMEQGKKKQEGQKIIKKIPLQEKHLQPKVA
RDTYQKDAPSQRQADTDIQGGIRNGDAFARDDKQPRGLGGQSLPSCFLLGGQALQPPEGD
EVMEAFEPDFQAQPNDKEYDGYDQQESPGYDAADDAAPLVPQQRLAETLGISTHRMQVMK
ASFFQEPQPIDKDPKFYGKAQSSFLGHQGYRPDSSVHSFSHSFQETSGYLNQHAGMMPAP
LSLNRSLLTSKGYRGSPVDTGYDMDGRPFTKRRPPPSSGLFASPQTSGMLLSSFHLPNQR
RMDTSMTEQPIKMVGARPIQKQVPLAKSLVNRKTNYLADFGCIRERTFRIGWSSGWNVTH
SGQAVGQQLMKGMKHETVSFTLLPAKAPSRPSVDVAPYSVSLEKVHVSSHAQPGDRHAKA
LHINLLKVNLAHSLGAEEKGCPTFTLSRGVGAIHDYASMVHKDVEQKLSRDLVSLEHSRQ
VFDLLVALWGQMEDQEEEEEDISKSGYVGQKMRRIAFSKWLANAASEVVQREVQDSKFKD
LGNIEAVFSLLTGHQIAEACEVAQQSGDHRLALLLAQAGSTREARQLVTAQLVDWRELEA
DQFIAPEYLKVYALLAGILVWPSSKGEINTCENLDWKRALALHLWHHCNPTASVADALAA
YEDGFTGQSSSEFYCKRPAPPYMEKNESLFTDDSSQQIFDTCYHLLKLYGDRTYPLEKVL
APPCHSSHHLDYRISWHVMQSLEALGYSHLSEKHSSHLHTSYAAQLEAMGLWHWAIFVLL
HITDVNRREASVKSMLERHASLVKSSENESIESFLTENLHVQPAWIHQAKALRALYENKP
HDRACQLQQAGQWNDCHRVVMRDIAADCIINENYTYLRSYLDVLGMEENCCLIQDWNTNG
QVYLDFIRIRERIAELEQGEPSIAELERLHPDIASLCQRVGSVKCNNAKDRLSVAEMSKR
TANMMKIVLSLQQGSEMKVVTGGKEPGPIQSHLLVPHINKLPLPEDYTLQELRQLARSCL
VELTS
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacaacaaaatacccagtttgggagttctgggtttggtgccaaccaaacatct
gccttcagcacccctgctagtggtgggtttggaacacccagtgcctttggtgcacaaaca
cccagtacaaacctgtttggaaatacagctaacactaatacctctggtggactattcggt
aacaacaacaacaacagatttggtcagccaaatacgtcaagtggaactgggttttcattt
ggtagcaatgtatttggtactagcaacaacaacactgccaccagtacagggggaggaggt
ctctttggcaccccagcaagcaactcctttggcactggagcatttggagccaagccggct
gcagggtttggtacaaatacctcagggagcctctttggacaacagccaagcagtagtggc
tctctgtttggacagccaacaaacacggcctctacaggaatctttggagccagtgtagga
ggaaacctctttggttcatctcaatcaggcaccaccatcaaatttcaagctccaaacagc
caggacacaatggttaagaatggcaccacccaacaggtgaacacacgtcatcaagtcatc
agtgccatgaagcagtatgaaggaaagagttttgaggaactccgactggaggattatgtt
gccaataggaaagggggcacgggtacgggcatcctgggcatgggtatgacgcaacaagac
agtaaatccagtggactctttggacaagccaataccaccagtggatttacctttggtaca
cagagcaaacccctctttgggggtgccaccactgcaggagggtttggaaccagtggcagt
ctgtttggccagacggcccagccccaacagcagcagagtggtggattattcggggccgct
aaacctgccttcggccagacgacacagagctcttccctcttcgggaacacagggacaggg
acaagtctgtttggtcaaaatacgcaacagaagaccctcttcggccagcccaccaccact
ccgaccaccacgccattgtttggaggtggaaccaacacctttggagcaacaaccaacacc
ttcggcaattccagcttcggtcagaataccttcggtcagccaaaccagaccggcagcttg
ttcaacaaaccaacaggctttggcacgagtaccggcaacacaggactttccttcggcaca
cagagcaacagtctgtttggaaatcagagcaagccgggcggtctgaccctcgggggaggc
acaagtactggctttggaacaacaacagatggaggactgtttgggaacaaaggcacaaca
gggtttggcacaggattggggacaggtagtacgtttggatctaccctggggtcaactttc
aacactggtaacacaggggggtccctctttggtaataacaagacgactggctttggctct
acctttggtaacaccggccttaatctcggaggtggctttggaagcactggattaaacacg
ggtggaaccaacgcccagttaggaggaaatgctccttcccagaatgcacagagtcagctt
catctttttaacctactgaacagtccttatggagataaccctctctttaagaacaagcta
acggaaaaggatgctaaagatggatctaacaagtcaaccagttttgctggtcagaaacct
ttgaatattccttcacattacaaggtatctgcaagacagtcgcctagtgctaaaccaaaa
cctcacttttctaacaacaagtcttggaaggctaagttctttgaagggcttgaagaggaa
gatccaaccctgagtccagctacatttgtaccgagaaggagtgtgaagaaactggtcatc
aagaagaagttggaattagaggataatcatgtgaatgactcttctctatttggcaagaca
ctgtcaacggacgatgacctcattgaacgtacttccatttatccagagagagattctgac
agagatcatgccactgacagacaaaagccaaatcaagatggaggatcaccaaggggaaac
cccacctcctcaatgaaccagacttcccctgctggggttttgttttctcccattgagcca
gcaagctcaagcaaggaagatggtgatcccaactgcaccgtatctgacctcaatcctacg
ggaggatcaaaaccaaccaaaaagtccctggagtcttcagcaaaggttccgcttaggctt
caagaatccacctccgatctggaccagtcttctttcgtggaggtaccggacgagctggaa
aatttaccaccccctcacccggctggggttgtcttacacagtcaggggtactactgcata
ccctccttgaaggagttggcttccatcaccagagacgggcattgcgaggtggagaatttc
accatcggcagagaaggttatggaagtgtcttcttcccgggggtcacagacatctccaac
ctcaacttggatgaaattgtttacttcagacgtaaagaaattacagtctacccggatgat
gattcgaaaccagctgagggtgaagggctcaacaagagggctgaagtaaccctagacagg
acctggccagtagacaagagtagcagagaaccaataacagatattgagcgattaaatgct
ctcggctatgaagagaaactggagcgtgcaaccaccaagttgggagctaagtttattgag
tacagaccagaaacaggttcctgggtttttgaggttccccacttttcaaagtatagcttg
caagatgacgatgaagatgatgaggttgtacctatggagcagggaaagaaaaaacaggaa
ggccaaaagattatcaagaaaattccgttgcaggagaaacatcttcagcctaaagtagca
agagatacctaccagaaagatgctccatcccagaggcaggcagacacagacattcaggga
gggatcaggaatggtgacgctttcgccagagatgataaacaaccccggggtcttggaggg
cagagcctaccctcctgttttcttcttggtggacaggctttacaaccaccagaaggagat
gaggttatggaggcctttgaaccagatttccaggctcagccgaatgacaaggaatacgat
gggtatgaccagcaggaatcgcctggatatgatgcagctgatgatgctgcacccctggta
ccccaacagcgcctggctgagaccttgggcatcagcacccaccggatgcaagtgatgaag
gcatcgttcttccaggagcctcagccaatagacaaggatcccaagttctatggcaaagct
cagagtagttttcttggtcaccaaggataccgaccggattcttcagtccattctttcagc
cactcattccaagagacatctggatatctcaatcagcatgcaggcatgatgccagcacct
ttgagtctcaacagaagtttactcacgtctaaaggataccgagggagcccggtggacaca
ggttatgatatggatggtagaccatttaccaagagaagacctccaccgtcatcaggtctt
tttgcatcacctcaaacatctgggatgttgctctcatccttccatctccccaaccagagg
aggatggacacttcaatgacagagcagccaatcaaaatggttggtgcaagaccaatacag
aaacaggttcctctggcgaagtcacttgttaacagaaagacaaattacttggcagatttt
ggttgtatcagggaaaggacttttagaatcggctggtcgtcaggttggaatgttacccac
agtggtcaggctgtgggtcaacagcttatgaaggggatgaaacatgagactgtctccttc
accctactgccagccaaggccccctcaagaccctctgttgatgttgctccatacagcgta
tccttggagaaggttcacgtatccagtcatgctcaaccaggagacagacatgcaaaggca
cttcacatcaatctcttgaaagtcaacttagctcacagtctcggagcagaggagaaagga
tgtccgactttcaccctgagcagaggagtgggtgccattcatgactatgctagcatggtc
cacaaggacgtggaacaaaagctgagcagggacctggtatcgttggagcattcgcgccag
gtctttgatctcctggtagccctctggggacagatggaagaccaagaggaggaggaggaa
gatatttctaaatccggttatgtgggtcagaagatgagaaggattgccttctctaagtgg
ctggccaacgcagcttcagaggtcgtccaaagggaagtgcaagattccaaatttaaggac
cttggtaacattgaggcggtattttcactgctcaccggtcatcagatcgcagaagcctgc
gaggttgcccagcagtcaggtgaccacaggttagctctcctattggctcaggcaggaagc
accagagaggctaggcagctggtcacagctcaactggtagactggagagaactagaggcc
gatcaattcattgccccagaatacttgaaggtctacgctctattggctggtattctagtc
tggccatcatctaaaggagaaatcaacacatgtgaaaacctggactggaagagagctcta
gctttacacctctggcatcattgtaaccctacagcatctgtggcagatgccttggcagcc
tatgaggatggtttcacaggtcaatcttcatcggagttttactgtaaaagaccagcgccc
ccttacatggagaagaacgagtctctcttcacagacgatagttcccaacagatcttcgat
acctgctatcacctcttgaagctttacggtgataggacttacccgttggagaaagtccta
gccccaccctgccattcatctcatcacttagactacagaatcagttggcatgtgatgcaa
tctctagaagcattgggttactctcacctctctgagaaacactcgtcccatctccacacc
agttacgcagctcaactagaggccatgggtctctggcactgggcaatctttgtcctgctg
catataactgatgttaacaggcgagaggcatctgtcaagagtatgttagagagacatgca
tcgctggtgaagtcatcagagaacgaaagtatcgagtcattcctgacagagaacctccac
gtacaaccagcatggattcaccaagccaaagctttgagagcattgtatgagaacaaacct
cacgatagagcttgtcaactccaacaggctggacaatggaatgactgtcatcgagtagtg
atgagggacattgcagcagactgtatcatcaacgagaattacacatacctgaggagctac
cttgatgtactcggtatggaagaaaactgctgtttgattcaagattggaacacaaacggt
caggtctatttggatttcattagaatccgagagaggatagcggagctagagcaaggagag
ccttcgatagcagaacttgaaaggctgcacccagatattgcatcactgtgccaacgtgtg
ggcagtgtcaagtgcaacaatgccaaagacagactcagtgtagcagaaatgtccaagaga
actgcaaacatgatgaagattgtgctcagcttgcagcagggctcagaaatgaaagttgtg
actgggggcaaggaaccaggtccaattcagtcccatctgctggttcctcacatcaacaag
ttacccctccccgaggactatacgcttcaagaattgagacagcttgccagaagttgtctg
gtggaactcacctcctga
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integrated database retrieval system
