KEGG   Apostichopus japonicus (Japanese sea cucumber): 139979951
Entry
139979951         CDS       T10891                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ajj  Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:ajj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ajj03041]
    139979951
Spliceosome [BR:ajj03041]
 Complex B
  Other components
   Complex B specific factors
    139979951
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_Gbeta Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_ACSF4 NBCH_WD40 LisH_TPL Ge1_WD40 Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_SPT8 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_BBS7 Beta-prop_IP5PC_F Beta-prop_NOL10_N DUF7165 WD_LRWD1 VPS8_N Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 139979951
NCBI-ProteinID: XP_071847318
LinkDB
Position
14:complement(8031313..8056880)
AA seq 513 aa
MTLEIESADVIRLIQQYLKENNMQRTLGVLQEESTVSLNTVDSIDQFVSDINNGHWDTVL
QAIQSLKLPDKTLIDLYEQIVLELIELRELGAARSLLRQTDPMIMLKQQQPERYVHLENM
LARSYFDPREAYPDGSSKERRRAAIAQALSGEVSVVPPSRLLALLGQALKWQQHQGLLPP
GSTIDLFRGKAAVRDEEEETYPTQLSKSIKFGQKSHVECSAFSPDGQYLVTGSVDGFIEV
WNYQTGKIRKDLKYQAQDSFMLMDDAVLCLCFSRDSEMLATGGQDGKVKVWKIQTGQCLR
RFENAHGKGVTSLKFSKDSSQLLSTSFDQTIRIQGLKSGKTLKEFRGHTSFVNEAMFTQD
GHSIISASSDGTVKVWNIKTTECSNTFKSLGSSTGADITVNSVLQVPKNMEQFIVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCSVSPRGEWIYCVGEDLVLYCFSTMSGKLERTL
TVHEKDVIGIIHHPHNNLLATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgactctggaaattgaatccgcggatgtcatccgactcattcagcagtatctaaaggaa
aataatatgcagaggactttgggtgttctgcaagaggaatcaacagtttccctcaataca
gtggatagcatagatcagtttgtctcagatattaacaacggccattgggacacagtcctt
caagctatacagtctcttaagctaccagataaaactttaattgatttgtacgaacaaatt
gtgctcgaactgatagaacttcgggagctaggagcagccaggtcattgcttagacagaca
gatccgatgattatgttgaaacagcaacaaccagagagatatgttcatctggagaatatg
ttagcaaggtcatattttgacccacgtgaggcatatccagacggcagcagtaaggaacga
aggagagccgccatcgctcaggccttgtctggtgaagtcagcgtggtgcctccatctcgt
ctcctggccctcctcggtcaggctctgaaatggcagcaacaccagggtctgttaccccct
ggttccaccattgatctcttcaggggtaaagcagcagtgcgagatgaggaagaggagaca
tatcccactcaattgagcaagagcatcaagtttggtcagaaatcccatgtggaatgctcc
gcattctctccggatggtcagtacctggtaaccgggagcgtagatggtttcattgaggtg
tggaactaccagaccggtaaaatcaggaaggatcttaaataccaagcccaggacagtttt
atgctgatggacgatgccgttctgtgcctttgcttcagccgagacagtgagatgcttgcc
actggagggcaagatggtaaagtcaaggtttggaagatacagacaggacagtgcctccgc
cggtttgagaacgctcacggtaaaggagtgacctccctaaaattctccaaggacagctca
cagctgttgagtacctcctttgatcagactatcagaattcaaggcttgaaatcgggaaag
accctgaaggaattccgtggacatacctcatttgtcaatgaggcgatgtttacacaagat
ggccacagtatcatcagtgcctcgtctgatgggacagttaaggtttggaatatcaaaacc
acagaatgcagtaacacgttcaagtctttgggcagttcaaccggagctgacatcaccgtt
aacagcgtcttacaggtgcccaagaacatggagcagtttatcgtctgcaacagaagtaac
acggtcgtgattatgaacatgcaaggacagattgtgagaagtttcagctctggcaagcga
gagggaggtgatttcgtctgctgttcggtttctccccgaggagaatggatctactgcgtc
ggtgaagacttggtcctctactgcttctcaactatgtccggaaaactggaacgaactttg
acggtccatgagaaagatgtgattggtatcatacaccacccacacaataatttattggct
acatatagtgaggacggcctcctaaagctatggaagccttag

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