Apostichopus japonicus (Japanese sea cucumber): 139980242
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Entry
139980242 CDS
T10891
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139980242
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ajj01007
]
139980242
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ajj03016
]
139980242
Enzymes [BR:
ajj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
139980242
Amino acid related enzymes [BR:
ajj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
139980242
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
139980242
Prokaryotic type
139980242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
tRNA-synt_2b
tRNA-synt_2
Motif
Other DBs
NCBI-GeneID:
139980242
NCBI-ProteinID:
XP_071847881
LinkDB
All DBs
Position
14:complement(19411655..19426728)
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AA seq
522 aa
AA seq
DB search
MALTTSWTKLRHLLTLQKHTRNIIVVASRHCNNTSQPTTIQQVDEEVAKLLDLKAQLGDE
PTPKTVLKTPKGTRDYSPKQMAIREGVFKVIVDCFKRHGAETIDTPVFELKETLTGKYGE
DSKLIYDLQDQGGELLSLRYDLTVPFARYVAMNKIAKIKRYHIAKVYRRDNPAMTRGRYR
EFYQCDFDIAGQYDPMIPDAECIKIVYEILDNLKLGNFVIKVNHRLILDGLFEVCGVPKD
KFRTVCSSVDKLDKTFWEDVRGEMIDDKGLDPISADKIGEYVQLNGSSELVEKLLKDEQL
VQSKAAKEGLEGMKLLIQYCDIFGVKDRVRFDMSLARGLDYYTGVIYEAVLEGAELVKSN
SKSKEQIGVGSVAGGGRYDGLVGMFAAKGKKVPCVGVSIGIERLFSIMEAKMERGNQEVR
TVETEVLVASAQPNMLEERLRLCKELWDAGIKAEISYKANPKMLDQYQYAEKAVIPFLAV
IGEQELKDGVVTLRDTKTREETPVPRADLVSTIKQKCCSNSI
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctcttacaacatcttggaccaaactacgtcatctactcactcttcaaaaacacaca
cggaatattatcgtggttgcttcacgtcattgtaacaatacttcacaaccaacgacaata
caacaggttgatgaagaagtagcaaaactgttggatttaaaagcgcagcttggggatgag
ccgactcctaagactgtcctgaagaccccaaaggggacaagggattactctcctaaacag
atggccattagagaaggcgtgttcaaagtcatcgttgactgtttcaaacgccacggggcc
gagaccatagacacgcccgtattcgagctgaaagagacattgacaggcaaatatggtgaa
gattccaaattgatttacgatcttcaagatcaaggaggagagctgctctcactgagatac
gatctaaccgtaccatttgcccgctatgttgcaatgaataaaatcgctaagatcaagcgt
taccatattgccaaggtatatcgccgtgacaacccagctatgacaagaggacgatacagg
gagttttatcaatgtgactttgacatcgctggtcagtatgacccaatgattccagatgct
gaatgcataaaaattgtctacgagatcctagacaatcttaagctgggaaactttgtaata
aaggttaaccacagattaatattggatggcctctttgaagtctgtggtgtgcctaaggat
aaattcaggacagtctgttcctccgtggacaaactagacaaaactttttgggaagatgtt
cgtggagaaatgatcgacgacaaaggactcgatcccatctcagctgataagattggcgaa
tatgtgcaacttaatggctcttcagagttggtcgaaaaattgttgaaagacgaacaactg
gtgcagagcaaggctgccaaagagggcttggaaggaatgaagttactgatacaatattgt
gatatttttggtgttaaggatagagtccgatttgatatgagcttggccaggggcctggac
tattacactggtgttatttatgaagctgtgctagaaggtgcagagctagtcaaatctaac
agcaaaagcaaagaacagatcggtgtagggtcggttgccgggggtggaagatatgatggt
ctggtgggaatgtttgcagccaagggtaaaaaggtaccatgtgtcggtgtcagcattgga
attgaacggctcttctccatcatggaagccaagatggagagaggtaaccaagaggtgagg
acagtcgagacggaggtgctggtagcatccgctcaacccaacatgttagaagagagactc
agactctgcaaggaactgtgggatgccggtatcaaggcagaaatttcatacaaagccaat
cccaagatgttagatcagtaccagtatgctgagaaggcagtcattcctttcttagctgtg
atcggtgaacaagagctaaaagatggcgttgtgacgttgagggacaccaagacgagagag
gagacccctgtacctagagcagaccttgtgtccaccatcaaacagaaatgctgttccaac
tcgatttga
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