Apostichopus japonicus (Japanese sea cucumber): 139980326
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Entry
139980326 CDS
T10891
Name
(RefSeq) uncharacterized protein isoform X1
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139980326
Enzymes [BR:
ajj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
139980326
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
139980326
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SRI
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
139980326
NCBI-ProteinID:
XP_071848025
LinkDB
All DBs
Position
14
Genome browser
AA seq
1337 aa
AA seq
DB search
MMSKKKAKNKRLTDFFSSKNADNLEGKHANVQTALREIFGYSLFKSELQKQTVEAVINGN
NDTFVSMPTGAGKSLCFQLPALVKEGIALVISPLIALIEDQLKHLKDKGIEARTLNSKIT
TSERAEILTNLQQKRPTLKLLYITPEQAATPNFQLILTDLLRRKLLSYFVVDEAHCVSQW
GHDFRPDYLKLGSFRKKIKGVPCIALTATAPAHVQKDILTHLNLQNPKIFKSSCFRGNLN
YQVVFKDLLESPLSDVRQFVEEVLEDDRQNGDGTGCGIIYCRTRDSCDTVAQQLDTDGLS
AVSYHAGLKTADRTKAQTDWMDGRVSVIVATISFGMGVDKASVRFVIHLTMPQSMAGYYQ
ESGRAGRDGNEAFCRLYYSRQERNLVSFLLTKDLANRKKKKGAKDDGTRSKATMQSFNAL
IKFCEENYCRHAAIANFFGDEKPNCNKSCDVCLDKKSIQKQLNFLNGGLWKTGRGCNGYN
SRPVMYSDNMELYGGGRPMQSSGPWNDSGDEDDGKEGEEQARKHRNKLIHDEFAKRRKGQ
PKLQKVEFEPPSEDCPLLDAANEKIPGLTVKSREFCLKTLENSLASNRDTVKIEGRTARD
IFNMALTMEHKVFQGAKKVNMYKAKIISLSSEIKKYTKEGTPYTPITSEDILGPGRPKLA
LGGFMKASSLLEGGEVQGHQEATSSTKKTRLAFWESLIKPKSNGQGEAASESARSVSEPK
SDSNLEKRNAIVSEKKERIDGWDDHTKHVLQKQEQIEEDGDVKCSRTESERKENHKPDKQ
NVHSISSSSSESEDDSEIPRCGYYRTAKFRSARQMLKGVDRTDGPPKSSRIDGVISSSGE
DEEPEGVKPHRMLPSSRLRQMLKGVDRTDGASKNSRIDGVIPSSGEDEESEGVKPHRVLP
SSQNPLQLSKYKRTGMDYSIDKNIGVKAEHDSKDTTEHDSKEDVIQDIFGKDDSDCEDGK
HSMQSSNHRVTPIVCSDNGENRATLEPDSKEDVIRDIFGTDDSDSEQPKISNLDLLKLST
EENVDTFKRQSEERINNISSVFDVFGNDEDVVVERSPSQFKPKRRTLKKTNDLPLKLNRD
DKMKRKTLPEGERKTDAELSVVQEIFGSDESDSENSSAKAAREKFKTLKSIDKQTGRRAS
PAKNHLKEQKHVKTEEGNQAKPSLPKRKYSFDPSSPVKDISGKEENGDRIEKRKLELLEE
NSRKRSKLSPSDTAAAESPEKAGAARKQRAVTFDPEVIDNENQTLSYHKKRVQVKLATDI
KKVVADAVVKYLTPYYKDNKVTSKDLFKSLARILTGDILSEDDIEHTNAKFKAKKAVKKY
FHSHNMCKSQTDLPSGS
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctaaaaaaaaggcaaaaaacaaaagactcaccgactttttctcgtcgaagaat
gctgacaatttggaaggaaaacatgcaaacgtgcagacagctttgcgtgaaatcttcgga
tattcactttttaagagcgaacttcaaaagcagacagttgaagctgttataaacggtaac
aatgatactttcgtatctatgcccactggtgctgggaagtccctctgctttcaattacct
gccttggtaaaggaaggtattgccttagtcatatcacctctaattgcactcatagaagat
caattgaaacatctgaaggataaaggtattgaagcaagaaccctcaactcaaagattacc
acttctgagagagcagaaatccttactaacctccaacagaagaggcctacactgaagtta
ttatacataactcctgagcaagctgccactcctaactttcagctgatcctcactgatttg
ctccgtcgaaaacttctgtcctactttgtggtcgacgaagcccactgcgtgtcccagtgg
ggacacgatttccgtccagactacctcaagcttgggtcatttcgtaagaagatcaaaggc
gtcccctgtatcgctctgacagcgacggcccctgctcacgtccagaaagatatcttgaca
catctgaatctacagaatccaaagattttcaagtccagctgctttcgtggtaaccttaac
tatcaggtggtcttcaaggacctattggagagtcctctgtctgatgtaaggcagttcgta
gaggaagttctcgaagacgacagacaaaacggggatggcacagggtgcggtatcatctac
tgtaggaccagagattcctgtgatacggtcgctcaacaactcgatactgatggcctgtct
gcagtatcctatcatgctggactgaagaccgcggacagaacaaaggctcagacagattgg
atggacggaagagtatcggtcatcgtagcaaccattagctttggaatgggagttgataag
gcatctgtcaggtttgtgatacacttgaccatgcctcagtcgatggctggctattaccag
gagtcagggagggctggcagagatggcaatgaagccttctgtcggctttattactcccgc
caagagaggaatctcgtctctttcctcctcactaaggatctagcaaacaggaagaaaaag
aaaggagcgaaagatgacggaactcgatctaaggctaccatgcagagttttaacgctttg
ataaaattctgcgaagaaaactattgccggcatgcagccatcgctaacttcttcggagac
gagaagcctaactgtaacaagtcttgcgacgtttgcctggacaagaagagtatccaaaaa
cagctgaactttctaaacggtggactgtggaagaccggaagggggtgtaacgggtataac
tcaagaccagtgatgtatagtgacaacatggaactgtatggtggaggtcgacctatgcaa
agcagtggaccgtggaacgattctggagatgaggatgatgggaaggaaggagaggaacaa
gccaggaagcacaggaataaattaatccacgatgaatttgcaaaaaggagaaagggccaa
ccaaaactacagaaagtcgagtttgagccaccatctgaagattgccccttactggatgct
gccaatgagaaaattccaggtttgacagtaaagtcgagagagttttgtttgaaaacattg
gaaaacagtttggccagtaacagagatacagtgaagattgaaggcagaactgctcgagat
attttcaacatggcactgaccatggaacacaaagtgttccaaggcgccaagaaggttaac
atgtacaaagccaagatcatcagcctgtcatcagaaataaagaagtacacaaaagaagga
acgccatacacgcccattacttcagaagatattcttggaccaggaagaccaaaattggca
ctaggtggtttcatgaaggcatcctctcttttagagggaggagaagtacagggtcatcag
gaagccacatcgtcaacgaagaagacacgtctagccttctgggaatcgttgatcaaacca
aagtctaacggccagggtgaagctgcctcggaatcagcaaggtctgtgtccgaaccaaag
tcagacagtaatcttgaaaagagaaatgcaatcgtctcagagaagaaagagaggatagac
ggttgggatgatcacacaaaacatgttctccaaaaacaggagcaaattgaggaggatgga
gatgtaaaatgcagcagaactgagtcggagaggaaagagaatcacaaaccagacaagcag
aatgtgcatagcatttcttcgagttcttccgaaagcgaggatgactccgaaattccccgg
tgcggttattacagaaccgcaaagttccggtcggctcggcaaatgttgaaaggtgtggat
agaacggacggcccaccaaagagttctagaattgatggagttatttcatccagtggggag
gatgaagagcctgagggagtgaaacctcacagaatgttaccttcttcccgtcttcggcaa
atgttgaaaggtgtggatagaacggacggcgcatcaaagaattctagaattgatggagtt
attccatccagtggggaggatgaagagtctgagggagtgaaacctcacagagtgttaccg
tcttcccagaatcctttgcagctatctaagtacaagagaacaggaatggattattctatt
gacaaaaacataggcgtaaaagcagaacacgacagcaaggacacgactgaacacgacagc
aaggaagatgttattcaagatatatttgggaaagacgatagcgactgcgaagacggcaag
cattctatgcagtcgtccaatcatagagtaacaccgatcgtttgttccgataatggagag
aatcgggcgactttagaacccgacagcaaggaagacgtcatacgggatatattcggcacg
gacgatagtgacagcgaacaacccaagatatccaatctagacctactgaaactctccacg
gaagaaaacgtggatacattcaagagacagagcgaagaacggatcaataacatatcttcc
gtgttcgatgtattcggcaacgacgaagatgtcgtcgttgagagatctccttcacagttc
aagccaaagaggagaactttgaagaagacaaatgatttaccgctcaaattgaacagggat
gacaaaatgaagagaaaaacattgcctgaaggagaaaggaaaactgatgctgaactctct
gtggttcaggaaatattcggctcagatgagagtgatagcgaaaattcctccgcaaaagct
gccagagaaaaattcaagacattaaaaagtatcgataaacagacaggaaggcgtgctagt
ccggccaaaaatcacctgaaggagcagaagcatgttaaaactgaagagggaaaccaggct
aaaccgtccttaccaaagagaaagtacagttttgacccgtcaagtccggtaaaagacatc
tcagggaaagaggaaaatggtgatagaattgagaagaggaaattggagttgttagaggag
aattcaagaaaacgttcaaagttgtcaccgagtgacacagcagctgccgagtcaccagag
aaagcgggggcagccagaaaacaaagggctgtgacctttgacccagaggtcatagacaat
gaaaaccagacattgtcataccacaagaagagggtccaggtaaagttagccactgacatc
aagaaggttgtagcggatgcagtggttaaatatctgaccccatattacaaggataacaaa
gttacgtccaaagatctctttaagtctctggccaggatcctgacgggtgatattctctca
gaggacgatatagaacacactaatgcaaaattcaaagccaaaaaagcagtcaagaaatat
ttccacagtcacaacatgtgcaaatcgcagacggatctaccttcaggatcatag
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