Apostichopus japonicus (Japanese sea cucumber): 139980591
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Entry
139980591 CDS
T10891
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04140
Autophagy - animal
ajj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139980591
04148 Efferocytosis
139980591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ajj04131
]
139980591
Membrane trafficking [BR:
ajj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139980591
Hops complex
139980591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_11
zf-RING_5
zf-C3HC4_2
Ephrin_lbd
DUF1664
zf_RING_Vps8
zf-C3HC4
zf-RING_Vps41
zf-RING_2
zf-C3H2C3
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
139980591
NCBI-ProteinID:
XP_071848442
LinkDB
All DBs
Position
15:15061841..15091838
Genome browser
AA seq
986 aa
AA seq
DB search
MASSLFEQYNEATARSGTPFTSGLQQPSTRSAPISSGYVTASIEEDVKIFTRQKINFTPP
RAITHMVANNNMLMIAMADRTILRINRDQPDQRSEVKLSDEKIHKMFLDPSGQHLIISTE
TLDVLYVGKKSRKAKHLAKMKGHLIESVGWNKMNRNETTTTEILLGTSRGCIFETLIQAG
DDGRFFQQNPDQYWKMVYNLGKESTVPVTGLHVERISGSTQSDKRTIFIMATTPERMYQF
IGTIMSTEAPIFLQVFQRYENTIPTGFLELPGNIGYSQLQVYTPKQKSTPQGFAWMSGPG
VYIGNFDFQELTRENLTKDSHLLIYPLDKEGTVQIKPISMILTEFHVLLLYSDRVQVICT
LNETPIDEDVYQAKFGKLLGMCRDATKGTIWTYSDQGVFMYKVTRESRDVWKIYLNKGDF
NLALTFCQDNQAQRDEVLRKQAQHFFDDKQFDKSALYFASTEMSFEEVTLKFIEADQKEA
LRIFLQKKMANLPPEDKAQMTMLVIWLIELFLNQVGILRNQPASKEKYDSVHDGFRKFIA
QKRVMECLKNNVDTVYDLIASHGDVTDMVFFAMLMKDYERVISHHIQGEDYQAALEVLKK
TSKKELFYKFSPVLMQHIPKELVTAWIIQDHSLDPKKLIPALVQYKHNDATGQTHEGIRY
LEFCVTKLKKEEQAIHNYLVSLYAQHAENQLMKYLLSEGEDATRVHYDLKYALRLCSEHQ
LKRACVHIYTTMELYEEAVDLALQVDVDLAKRCAEKPEEDDEGMKRKLWLQIAKHVVKEQ
SDIQKAMEILQECPLLKIEDVLPFFPDFVTIDHFKDAICSSLENYNQHIQNLQTDMDEAS
ESAEAIRADIHNMRNKYAVVTGQHKCAKCDSLLLSRAFYLYPCGHKFHADCLIKEVTIHL
SPTQRIHLSELEHQISSLKVSNSKRPQMPRKGDDLTPNREEMERLQTQIDDVVAAECVYC
GDVMIRSIDKPFIEQDELEARNKSWE
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagcctctttgaacagtataatgaagccacagcaagaagtggaactccattc
acatctggtctacagcaaccatccaccagatcagcaccaatttcatcaggttatgtgacg
gcttctatcgaagaagatgtcaaaattttcacaagacagaaaattaatttcactccacca
agggctataactcacatggtcgccaacaacaacatgctaatgatcgccatggccgataga
acaatcctacgtatcaacagagaccagcctgaccagagaagtgaagtcaaattgagtgat
gagaaaattcacaagatgtttctggatccatctggacagcatctcatcatcagcacagaa
accttagatgtcctttatgttggaaagaaaagcaggaaggccaaacatttagccaaaatg
aaaggtcatctcatagagtctgtcggatggaataaaatgaatcggaatgaaacgaccaca
actgaaattttactcgggacaagcagaggatgtatctttgagacattgattcaagctggt
gatgacggtagattcttccagcagaacccagaccaatactggaaaatggtctataatctc
gggaaggaaagtacagttcctgtgaccggtcttcacgtagagaggatatctgggtcgaca
cagtctgacaagagaaccatctttataatggctaccacccccgaacgaatgtatcaattc
attggtacaatcatgtcgacagaggcaccgatatttcttcaagttttccagagatatgaa
aatacaattccaactggttttctagaacttcccggaaacatcggttacagccagctgcaa
gtctacacacccaaacagaaatcaacaccgcagggatttgcgtggatgtccggtccagga
gtctacattggtaattttgatttccaagagctgaccagggaaaacctgaccaaggacagc
catttgttgatatatccgctggacaaagaaggcacagtacagataaaacccatctcaatg
atcttaacagagtttcacgtcctcctgctctactcagatagagttcaagtgatctgtaca
ctgaatgagaccccgatcgatgaagatgtctaccaagctaaatttggtaaattgctcgga
atgtgcagggatgccacaaagggaactatctggacttactctgaccagggtgtgttcatg
tacaaagtcacaagagagtccagggatgtctggaagatctacttgaataaaggtgacttc
aacctggctttgacgttttgtcaagacaaccaagcacaaagagatgaagtcctccggaaa
caagctcaacactttttcgatgacaaacagtttgacaagagtgccctctattttgcttca
actgaaatgtccttcgaagaggttacgctaaagtttattgaagctgaccaaaaggaggcg
ctaagaatcttcctacagaagaaaatggccaatcttcctccagaggataaggctcagatg
acaatgctagttatctggctaattgaactgttcctaaatcaagtcggtatactgaggaat
cagccggcatctaaagaaaaatacgatagcgtccacgacggcttcaggaagttcatagct
cagaagagagtcatggaatgtttgaagaataacgtggacacagtctatgatctgatagca
agccacggtgatgtcacagatatggtctttttcgcaatgctcatgaaagattacgagcgt
gtcatcagtcaccacatacaaggagaagattatcaagctgcattagaggtcttgaagaag
acctccaagaaggaactgttttataagttctctcctgttctcatgcaacacattccaaag
gagctggtcacagcttggattatacaggatcactctctcgatcccaagaaactcattcca
gctctggtccagtataaacacaacgacgccactggacagactcacgaagggatcagatat
ttagagttttgcgtgaccaaattgaagaaggaggaacaagccatccacaactatctagtt
tcgttatatgcacagcatgccgagaaccaactcatgaaataccttctgtcagagggagag
gatgcaacaagagttcactacgatctcaaatacgcccttcgactttgctcagagcaccag
ctaaaacgggcgtgcgttcacatctacactaccatggagctgtatgaggaagcagtggac
ctagctcttcaggtcgacgtggacctagctaagcgctgcgcagaaaaaccggaggaagac
gacgaaggtatgaagagaaaactctggctgcagattgctaaacacgtcgtcaaggaacag
agcgacattcaaaaggccatggagatactgcaagagtgccctctattaaaaatagaagat
gtcttaccgttctttcctgactttgtaaccatcgaccactttaaggatgccatttgcagt
tctctcgagaactataaccaacacatccagaacctgcagacagatatggacgaagcatcc
gagagtgctgaagcgataagggcagacatccataacatgagaaataagtacgccgtcgtg
acaggtcaacacaaatgcgccaaatgcgattccctgcttctgagcagagctttctatttg
tacccttgcggccataaattccacgctgattgcttgatcaaagaggtcacaatccatcta
agtccgacccagagaattcatctgtctgagctggagcaccagatcagtagcctgaaggtg
agcaatagcaagaggccgcagatgcccagaaaaggggacgatctgacgccgaacagggag
gagatggagagactgcagacgcagatagacgacgtcgtggctgccgaatgtgtgtactgt
ggagacgtcatgatcagatcgatagacaaaccgtttatagagcaagatgagttagaagca
aggaacaagagctgggagtga
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