Apostichopus japonicus (Japanese sea cucumber): 139980962
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Entry
139980962 CDS
T10891
Name
(RefSeq) protein pelota homolog
KO
K06965
protein pelota
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139980962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139980962
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139980962
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_2
eRF1_3
Motif
Other DBs
NCBI-GeneID:
139980962
NCBI-ProteinID:
XP_071849133
LinkDB
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Position
15:19536230..19547015
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AA seq
385 aa
AA seq
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MKQVHRHLEKDGSGQIGLIPEEPEDMWHAYNLVAAGDSLRSTTVRKVTMESSTGSSTSNR
VRTTLTISVEDLDFDVQAGVLRVKGRNIAENPYVKMGAYHTLDLELNRKFTLAKKVWDVV
ALDRIDMACDVTQSADVAAVVLQEGLAHVCLVTPSMTLVRTKVEHTIPRKRKGLCGRHDK
GLIKFYDAVMQGILRHIKFDVVKCIIIASPGFVKDQFYEYLFQEAGKQDNKILLENKSKF
ILVHASSGHKHVLKEILADPALQVKLADTKASGEVRALESFYSMLQTEPDRAFYGLKCVE
AANEALAIETLLISDELFRSKDIATRKRYVSLVESVRDNGGEVKLFSSLHVSGEQLNQLT
GVCALLRFPMPEIEEDDEDSSSDED
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagtacacaggcatctagagaaggatggatcaggtcaaattggccttatccca
gaggagccagaagacatgtggcatgcttacaatctagttgctgcaggagacagtttaagg
tccacaactgttaggaaagtcacgatggagtcatcgactggtagcagtacaagtaacagg
gtgaggactacacttactatctcagttgaagaccttgactttgatgtgcaagccggtgtt
ctcagagttaaaggaaggaacattgcagaaaatccgtatgttaagatgggtgcctatcac
accttggatctggagctgaatcgaaaattcacattagctaagaaagtctgggacgtcgtt
gcgttagatcgaatcgatatggcttgtgatgtcacccaatcagccgatgtggcagctgtc
gtcctccaggaggggctagcccatgtgtgtttggtaacccccagcatgacattggtgagg
accaaagtggaacataccattccgaggaagaggaagggcttgtgtggtcggcatgataaa
ggactcatcaagttttatgatgctgtaatgcaaggcatccttaggcatatcaaatttgat
gttgtcaagtgtatcattatagccagtccagggtttgtaaaggatcagttttatgagtat
ctttttcaagaagctggcaaacaggataataagatacttttggaaaacaagtccaagttc
atcttggttcatgcatcatctggccacaaacatgtcctcaaagaaatattagccgatcct
gctctgcaagtgaagctggcagataccaaagcatcgggtgaagttcgagccctggaatcg
ttttacagtatgcttcaaacggaacccgatagagcattttacggactgaaatgtgtagag
gctgccaatgaagctctggctatcgaaacccttctcattagtgacgaactctttaggtcg
aaagatatagcaacaagaaaacgttatgtttcactcgttgagagtgtcagagacaatggt
ggtgaggtcaagctgttttcaagcctacatgtttcaggagagcaattgaaccagctgaca
ggggtctgcgcccttttgcgttttccgatgccagaaattgaggaggatgacgaagattcc
agttcagatgaagattaa
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