Apostichopus japonicus (Japanese sea cucumber): 139981297
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Entry
139981297 CDS
T10891
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a-like
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03020
RNA polymerase
ajj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
139981297
09124 Replication and repair
03420 Nucleotide excision repair
139981297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajj03021
]
139981297
03400 DNA repair and recombination proteins [BR:
ajj03400
]
139981297
Transcription machinery [BR:
ajj03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
139981297
DNA repair and recombination proteins [BR:
ajj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
139981297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
MRP
Motif
Other DBs
NCBI-GeneID:
139981297
NCBI-ProteinID:
XP_071849659
LinkDB
All DBs
Position
15:complement(4946813..4949246)
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPTFESFILFDGEKKITIEKDTKVPNAVIFHVQKEDHTLGNMLRAQLLKDPKVLFAG
YRQPHPLENKFLLRVQTTADYSPQEALTSAITDLISEVSLLEERFKVAIREKQEGFD
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcctccaacttttgagtctttcatcctctttgatggagaaaagaaaattacc
atagagaaagacacaaaagttcctaatgcagttatattccatgttcaaaaggaagaccat
accttgggaaacatgctgagagcacaattgttaaaagacccaaaggttctctttgctggg
tacagacagccacatccgttagaaaacaaatttttactgcgagttcagacgaccgctgac
tacagtccgcaagaagctcttaccagtgcaatcactgatttgatctcagaagtttcactg
ctggaggagagattcaaagtggctattcgagaaaagcaggaaggcttcgattga
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