Apostichopus japonicus (Japanese sea cucumber): 139981543
Help
Entry
139981543 CDS
T10891
Name
(RefSeq) HEAT repeat-containing protein 1-like isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03008
Ribosome biogenesis in eukaryotes
Brite
Ribosome biogenesis [BR:
ajj03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
139981543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139981543
NCBI-ProteinID:
XP_071850110
LinkDB
All DBs
Position
2:20412957..20458582
Genome browser
AA seq
2155 aa
AA seq
DB search
MIIQSAKLQILKMTSLAEQLKKLAVPQGRNLANAREKRRKSILFDSKEAAGLNRETVYAI
GVNGVQELATIDPSFQEFEETLFSEGSKTMERSVQTVEVNKNLDKHIRSFLLQMSPYFTL
KPAQKAMEWLVYRFGIHEYNINDVMMAIMPYHTTKVFVRVVQIIDLSSKSHPWNWLKPIQ
ETGVSLSRSTVLTHCWKDPGFLQFVCNMVPYAIKAHKAVKGRDPSRSDSALRIMFSFYAS
TVIGAMEHGKSMKEQFLATLVPFLMKGLKSSYVDYRVASYMVLSQMSAQATLDERLLLPI
MDTMCKNSHPSLEEDMISCLAIIYQTQDVRELQDSALTTMSDSSSLLPSLKKLTSTRDIN
PFLLALLRKLVSVLLSEDEEITDKSHDKKRMEELMERLIAEISLDRKMSLSLIRFLLKMI
LKRDDSHWTTPFFSSLISNLERQYPESMDEAIQKLASTKLTNEKEKKLQTFLHMTSSGCK
HEVLPEVETSLVLSLNHPNSETRRLAVRHLLTLNQSGTVDSEFLQSALSLRIEDRDPRVI
FEVLQFGEDLCNVLSPEQVAIKLEKMLSKWHRRTKGVWPEVAAKCIELLTSRSMSTEESA
MDAAFAIVLPYLLPSTSERTKQDSDMFHCIVTSDLGESHGIMKNLSKFKKKRDNLSGFTA
QLLQQMAQNLSEYPTEERRNLVKFLLECGDAHHLKEAYRFAISLILTRTVRMLGKTEQME
IIDLLLESLTEDLGQVKGHTEQIKKEDVTGIGIPEAVLTGLCQLLTKKESTDGKLSAELL
LGHLWCLESIVATLERVEMPGEENAWLELHANSEDIKNRYLLTLVKLFDLLTQSVAYATD
GSVTNYLKEILGLLIQKHFQSTTQFWRFLSLVCTSHCRLHGDSPYDISYLFQVCCLEMAN
ISFSKTDDALLDKVLQKDSIAFLSLLLNLGHPSKSIRKVAVDCLTTVQTKSPQVTSPYGQ
MLKLILKRGQEIIDDEQYLPQALKITLAKLEKSQKRSSSKGRVDEESAVDWLADCISSEQ
TPHHVRCALVERLALVESKALLSRLITPMKNAVVTAGSSVGVMTAYNFTLAKSILGHFRP
ATADLLNDKNCRDSLWLCLSQEALTREGTSMQCAALDKISVEFFLAMSEPVQQDLFQHLI
ALSLESQSPDMVKVLNRVLRKLPLSPELIADELKTVLPDQKLKNLHDAKEARRRKQQKKT
DQKAAEVSGKSWQRATFILELLSQKKLHKMENASKLVPELFSLLALCLEADSQLDSLEYI
KQLLLTLLHTICENMTSRSADEAAVNLGNLSEEQFNVELVVQCVRTSDNPQTHNHALLVL
NVAAQLFPEHLLHNIMSIFTFMGANVLRQDDGYSFQVINKTLQTVIPALLKASNEGALPQ
SLGTNVHKIVFMIIRIFVDAFPHIPDHRKLPLFTQLIETVNAEQYLWSCIVLLVESVALK
GPGALYPEEIEDIKVSGRNQQFWMALCHHFSSQVQIISITKMIQYLSTFLDSAPIISKSS
RSQPDGFDKLLDKRRFSGKQLRQFQFTTVGFFSQLLSSDEFISKVASLSEEEKVQLQGLY
QVLLEENLRFAQQVAQCGENNADNATAKFWKALLHRTYDVLDKVNALLPVDVFIQVISGL
LGNKLASVRRKAMELLNNILVQHKDRFTENEHILLLGLIPQLVTVAQSPSDTTSTEVDVN
RQTALYSLKLLCKLLGSESSREFTPVMELTLEILQKEAANTQLVSSALLCLAETVCSLRA
YSIPFLSRMVPTILKMLAGTKLVDSMNLFMLCAVTAVQKIVETLPNFISPYVGEILQQVS
RLSCNHDDEKTQLNLRLKACRQMLSKKLPLRVLLPAVAQTYTVIENTHSESIVPLMNILQ
DHINTASKEDVLSHHSTTMTFFLDALDYRTRHPEVGKEEVSQREGAVIDSILMHIMKLSE
TTFRPMYYKFYDWSTQNNAPRSRLLSFYNLSGAIADKLKSIFSLFAGHIISNCAQLLDAN
NSAKTEEPFYEDDASNEKSNLLVQLILACLHKCFLHDKGAFVSKERFELLSQPVIDQLEN
VHGSDAVYEDRIKEHVGPCVSAMMSSVSDQSIWQPLNYQLLLKMRHTSPKIRFAALVVLD
QVHQSLKQGYLSLLPETIPFLAELMEDESEEVEEKCQELVKDLEKTLGEPLQKHF
NT seq
6468 nt
NT seq
+upstream
nt +downstream
nt
atgattatacagagtgcaaaattacagatactaaaaatgacgtcattagcagaacaacta
aagaagcttgcagttcctcaaggaaggaaccttgcaaatgcccgtgagaaaaggcggaag
tcaattctctttgactccaaggaagcagctggacttaacagagaaacagtttatgcaatt
ggtgtaaatggagtacaagaacttgccacaattgatccaagctttcaagagtttgaggaa
actctcttcagtgaaggttcaaagactatggagcgatcagtacagacagtagaagtcaac
aaaaacctggacaaacatatcaggtcttttttgttgcagatgtctccctacttcaccttg
aagcctgcccaaaaggcaatggaatggcttgtgtacaggtttgggattcatgaatacaac
attaacgatgtaatgatggcaattatgccctaccatactaccaaggtctttgtcagggtt
gtacagatcattgatctgtcatcgaaatctcatccatggaactggctgaaacctatacag
gagactggggtatcactctctagaagtacagtactgactcattgctggaaagatccaggg
ttccttcagtttgtgtgtaatatggtgccttatgccataaaggcgcacaaagctgtcaag
ggtagggatccatcaaggtcagactctgctctccggatcatgttttccttctacgcctcc
acggtgataggggccatggagcatgggaaatccatgaaagagcagttcctggccaccttg
gtgccattcttgatgaagggtttgaaatcgtcctatgtggactacagagtggcctcttac
atggtactcagccagatgtctgcccaggctacattggatgaaagattactgctgcccatt
atggacactatgtgcaagaacagccacccatctttggaggaagatatgatctcgtgtctg
gcaatcatttatcaaacccaagatgtgagggagcttcaagacagtgcattgacgaccatg
tctgattcgtccagtttgctgccctctctcaagaagctgacctccaccagagacatcaat
cccttcctactggccttgctccggaagttggtcagtgtattgttatccgaggatgaggag
atcacggataaatcacatgacaagaagaggatggaagaattgatggagaggctgattgca
gaaataagtcttgataggaaaatgtcactatcgttaatcaggtttctcttgaagatgatt
ttgaaaagggatgattctcattggacgactccattcttcagttccctcatcagcaatctt
gagcgacaatacccagagtcgatggatgaggccatccaaaaactggcctcaacgaagcta
accaatgagaaagagaagaagctacagacatttctacacatgacgtcgtctggatgcaag
cacgaagtcttgcctgaagtagaaacttccttagtcttgagtctaaatcacccaaacagt
gagaccaggcggcttgccgttagacatctcctcactctgaaccagtcgggaactgttgac
tcagagtttttacagtctgctctctcattgagaatagaagacagagaccccagagttatc
ttcgaagtccttcaatttggagaggatctttgcaatgtgctgtctccagaacaagttgcg
atcaaattagagaaaatgctctccaaatggcaccgtaggaccaagggtgtttggcctgag
gttgccgccaagtgcatagaactgctgacttcaagaagcatgtccaccgaggaatccgca
atggatgcagcgtttgcgatcgtattgccgtatctgctgccctctacttccgaaagaacc
aaacaggattcggacatgttccactgcatcgttacgtcagatttgggagagtctcatgga
atcatgaagaacctatcaaaatttaaaaaaaagcgtgacaatttatcaggatttaccgcc
caactgctccaacaaatggctcaaaacttgagtgaatatcccacagaggaacgaagaaat
cttgtcaaattcctcttggaatgtggagatgctcatcatttgaaagaagcttacaggttt
gcgataagtctcattttgaccagaactgtcaggatgcttggcaagactgaacaaatggaa
ataattgatcttctactggagtcgttgacagaggacttgggtcaggtcaaaggtcacaca
gagcaaatcaagaaagaagatgtgactgggataggcattcctgaagcagttttgaccggt
ttgtgccagttattgacaaagaaggagtcaacagatggcaaactttcagcagaattactg
ctcggccatttgtggtgtctggaatccatcgtggccactttagagagagttgaaatgcca
ggagaagaaaacgcctggctggagctacatgcaaatagtgaggacatcaaaaaccgctat
cttctgactcttgtgaagctgtttgaccttttgacccaaagtgttgcatatgcaacagat
ggaagtgtcactaactacttgaaagagattttgggactactgattcagaaacattttcag
agtaccacccagttttggagattcctgtcattggtctgcacgtcccactgtcgtctccat
ggtgacagtccctatgacatcagctacttgttccaagtctgctgtctagaaatggcaaac
atcagcttcagtaaaacagatgatgctttacttgacaaggttcttcagaaagacagcatt
gcctttctgagtctgttgcttaatttggggcatccatccaaatccatccgtaaagtagcg
gtcgactgtctcaccaccgttcagaccaagagccctcaagttacatctccttacggtcag
atgttgaagttgattctgaaaagaggacaagagatcattgatgatgagcaatatttacct
caggcgctaaagattacgttggccaaactggaaaaaagtcagaaaaggagttctagtaaa
ggcagggtggatgaagaatctgctgttgattggctggctgattgcatcagttcagagcag
acaccacaccatgtccgatgtgcactggttgaaagacttgcattggtagagagcaaggca
ttactctctagactgataacaccgatgaagaatgcagtagtcactgctggatcctctgtg
ggagtcatgacggcttacaactttacgctcgctaagagcattcttggccacttccgacct
gctacagctgacctgttgaacgataaaaactgccgggatagcttgtggttgtgtctgtcc
caggaggcattgacgagagagggaaccagcatgcaatgcgccgctctggataagatctca
gtggaattcttcttggccatgtctgaacctgtgcaacaggatctttttcagcacctgatt
gctctgagcttagaatcgcaatcaccagatatggtgaaggtccttaacagggtactgaga
aagctccctctgtctcctgagctgatagccgatgaacttaaaacagtgctccctgatcag
aaattgaagaacctgcatgacgcaaaggaagccaggcgaaggaagcaacagaagaagaca
gatcagaaagcagcggaggtcagcggaaagtcctggcagagggcgacatttatactcgaa
cttctctcacagaagaagctgcacaaaatggaaaatgcctctaaacttgttccggagctt
ttcagcctcttggcattgtgcttggaggcagacagccagctggattcactggagtacatt
aagcagctgcttctgaccctcctccacacgatctgcgagaacatgacgtcacggtctgcc
gatgaagctgcagtgaacctcggaaatctttcggaggaacagttcaacgtggagctggtc
gtgcagtgtgttcgtacgtcggataaccctcagactcacaaccatgccctgttggtcctc
aatgtggctgcacaactgtttcctgagcatctactacacaacatcatgtccatctttacc
ttcatgggagccaatgttcttaggcaggacgacggttacagcttccaagtgattaacaaa
actttgcagaccgtaattcccgctcttttgaaggctagcaatgagggagctctcccacaa
tccctcggaaccaacgtacacaagatagtgtttatgatcattcgcattttcgtcgatgcc
tttcctcacatccccgaccaccgtaagctgccgctgttcacccagctgatagagacagtg
aatgccgaacagtacctgtggagctgcatcgtgctattggtcgaaagtgttgcattgaag
ggtcctggcgccctctatccagaagaaatagaggacattaaggtctctggaaggaaccag
cagttttggatggctctttgtcaccatttctcatctcaagttcagataatcagtatcacg
aaaatgatccaatatttgtcaacttttctagacagtgctccgataatttcaaagtcttca
agaagtcaaccggacggatttgacaaactccttgataaaaggagattttcagggaaacag
ttacgtcagttccaatttactacggttggcttcttttctcagctgttgtcgtctgacgag
ttcatttctaaggtggccagtttgtcagaagaggagaaggtgcaactccagggcctctat
caagtactattggaagaaaacttgcggtttgcacaacaggtcgctcagtgtggtgagaac
aatgctgataatgcaactgccaaattttggaaagctttgctgcatcgtacatatgatgtt
cttgacaaggtcaatgcattgttgccagttgatgtcttcatccaggttatctctggcttg
ctcggtaataaacttgcctcagtcagaagaaaagcaatggagctcctcaataacatcctg
gtgcaacacaaggacaggttcacagagaatgagcacattctcctgttgggtctgatccct
caactcgtcactgtggcccagtctccctccgatacgaccagtacagaagtagatgtgaac
cggcagactgccctctacagtctgaaactgctctgcaagctgctgggctcggagtcctct
cgtgaattcacccccgtcatggagctgacactagaaatactccagaaggaagcagcaaat
actcagctggtgtccagcgccttgctttgtcttgcagagactgtctgtagcttgagggcg
tactctatccctttcctgtctagaatggtccccaccatcttgaaaatgctggctggaaca
aaactggtagacagtatgaatctcttcatgttgtgtgctgttacagctgtccagaaaatt
gtagaaactcttccaaacttcatcagtccttacgtgggagagattttgcagcaggtatct
cgtctgtcttgtaaccatgacgatgagaaaactcagttgaatctgcgtttgaaggcgtgt
cgacagatgctctccaagaagctgccgctgagagtcttgcttcctgccgttgctcagacc
tataccgttatagaaaatactcacagtgagagtatagtgccactgatgaatatattacaa
gaccatatcaacacagcttctaaggaggatgtactcagccaccactcaactacaatgact
ttctttctagatgccctggactataggaccagacacccagaggttggtaaagaagaggtg
tctcaacgtgagggcgctgttatcgacagtattctgatgcacattatgaagctgtcagag
accaccttcaggccaatgtactacaagttttatgattggtcgactcagaacaacgctccc
aggagccgtctcctgtctttctacaacctctccggagcaatcgcagacaagctgaagtcc
atcttctctctcttcgctggccatattatatccaactgtgctcaactgttggacgctaat
aattctgccaaaacagaagaacctttctatgaggacgacgccagcaatgaaaaatcaaac
ttattagtgcagctcatcttggcatgcctccataaatgcttccttcacgataagggagcc
tttgtcagtaaagagagattcgagttgctctctcagcctgttattgatcagcttgaaaac
gtccacggaagtgacgcggtgtacgaagacaggataaaagaacatgtcggtccttgcgta
tcggccatgatgtcatcagtcagtgatcaaagcatctggcaacctctcaactatcagcta
cttctcaaaatgcgccacacctcacccaagatccgcttcgctgctctggtcgtgttggat
caagtccaccagtctctgaagcagggttatttgtccctgttaccagaaaccatcccattc
cttgcagaattaatggaagatgaatctgaggaagttgaggagaaatgccaagaattagtg
aaggatctggagaagacattaggagaacctctgcaaaagcacttttaa
DBGET
integrated database retrieval system
