Apostichopus japonicus (Japanese sea cucumber): 139982181
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Entry
139982181 CDS
T10891
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04512
ECM-receptor interaction
Brite
Lectins [BR:
ajj04091
]
C-Type lectins
Lecticans
139982181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139982181
NCBI-ProteinID:
XP_071850873
LinkDB
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Position
2:21714211..21759876
Genome browser
AA seq
2212 aa
AA seq
DB search
MAYFNFNLKHIIISVLVLADLCTTIISQLVLQNSGVVVPTGRSVQLTELALQFRPVGDEE
QCRVRVEVNEPYYMRVGTIQPQVFDCMHFMESNVRYYHSGNPLLDQDVIKFIAYKLNETH
TITEQFDFRVDITTEDNMLIFPMAQLEVSEFFGDSEIINSSVLTFMYERLPNVSCQVSIN
TLRDGYPKYGELIRGVGEEEQTVRALQISCDEFLRIGLKYRHLAPPTPNRDFIVLSVEVL
DPNIQTESMLEKYYLPVELSACFPNQLPEASLMSSELLHVDQFILTTLTPDVLSGMDDES
PKEEIIFHIVEPLEPHEGKIVHLDDHTKPVQSFSQYDLEQMNIGYSPPTTSFTEQQVFRM
SLLVYDSFFEESRLIQVMFAVRPAYTNAPRVAVNTGLTMLEGQSRAIKNTDFRIVDKDSL
FIVRAKIVGGMRHGHILVNNRRALMFSQADIDRGAVVYQHDDSDTLKDSLELRITDGRDS
IRATIPINILPKDDTPPYLINNVELEVTEGETVRISRFSLLGTDKDSSDDYIIYRIVEPL
VGGEILKKYAEQSYGYPVIEFSQRDLLRGQIYYQHFGNEVFQDSVNLILVDNNFPPNESP
LQIFNVQIEQVHDLPPELCPRTRLSLQVLETEVVHITKQMLCFTDGESDDEDLLYTVTTP
PYFQTTHSLTDAGRLFSTAGLPMVMKDPRAPAIRSFTQGDISDRTVAFMPPFKEGGPVER
TVEFVFSVSDPFGNVILGQIFEVTVLPVNNQEPTIYITDFVVQEGGTITFMPMTMTVADM
DTLAQQLMVILVSEPSLGIFQVGERNLTSGEAFSVIDIMTGLVRYVHGGSDSLQDEFTIA
ASDGVFTVYQDVPITVMPLNDELPTLRPGLTSKLVTLEGGQVAIGSDVLSATDPDTNDLV
LQYIVVQHPLRGVILKGGLVVNRFSQKDVDDGLITYHHTAGEIGLTKVQDTVTFLVSDSS
VPTDENLPTHRVTISVTPVDNQHPGIIFGNPFFVLEGQKNSLTADIISALDRDSTTDQLT
FHITRQPEWGYVENVRPNPGSEKSNAGTPVDSFTFDDIQEGDIKYVQSVHQAVEPTSDSF
VLYVSDGERASPNVTFLVNVNPRNDEKPTMRVTNFTVYENSFYKILPNFMTVGDLDIPME
MLLFSIMDAPRHGMLVDRAVDDSVPVYDFNLNQFQNTMKLAYVHDGSESTSDSFDIRVSD
GKHVLRRTAYVTIVPVNDERPQVIKNAGLELSIHEHRLISPLVLLTSDLDTPDEDLIILI
HSLPQRGRLQRKVSVDVWEDITTLPTNFTQRDVNLNLIRYQHVGDLGTKGIDRFRFSVTD
GQYKTGKETFRIVVEGTKRLPLEVWNQGLRVREASYKVLTPDHLSATDHSDQIDSILYTV
LTDPTEGQLEDVSRPGVPLASFTQVDLIGQRIIYRHLRTDRVTNDAITLSIGNGYETRND
TFHIAVIEVDNSLPGLIVNEPISVVQWGVEVITLSNLQAIDLDTNPSRIAYIITQFPTSG
RLLLSGQPILHSFSQLDVDNLEVSYRHEVGDSDQDGFYFIVTDGTNEGFSTGDGVTNQPS
RFSIQIDHIDSSPPHIRRMEVPQKMETVHSNNGFILSNMVLHSEDECGSEGILYIVTREP
SFGHFENTETRQRIQRQFTQEEVDQRLIMYVIREEAQATNDSFTFEIHDCAGNAVVNKRF
DFSWSLITFPESIIQVCETQGVLPIQVVRVGNPFVSSFVGIRSVQMTANRDEDYVEPRAN
QLQFDPFETVAIWNVQIVEDDLEENRERFRVRLQEPFNALLGEFPKMVVVIKNAVDGYCA
GENPVVVDGDSGGGGCCDGGQPPPHGGLPDTTDPQQRLPFQPPVNIQPIPDFQYENRELP
DTPFRRPLEPPFERPLYPNRDFVDPHNPHYDQRPIGEIPVEGECCPPNPPFYQNPFGQPD
GSHLPPLGHQGDTPPRNPDLQDVFDNPAWRHALGGDAPPNAHNVPSDLSFEVFGNRRTGN
GQSSSSDGVLDHIFAPSVVHGRQEQPSRPDGEFSSSSDGTDLSQFLQERESSDPAWIAKV
LPCSGLNEGEVRLHHLTGSYFMCDGASWQKVSVLSSDSEPEAEGRCEEGWIFHQQRCYML
SNSARTWDRAQRRCGERYNGHLVSILSADDQNFIRSMMSGLDVWIGLNDKNREGHWEWIS
GDQISFSRWKPNTKSKRRDQRNCVYMNTRFRWVDDVCDMDVRRFICMKDAVF
NT seq
6639 nt
NT seq
+upstream
nt +downstream
nt
atggcatactttaactttaatctgaaacatatcatcatcagtgtactagttctggcagat
ttatgcacaacaatcatcagtcagttggttttacagaactctggagtggttgtgcccact
ggtcgaagtgttcaactcacagaacttgctttgcagtttagaccagttggagatgaggag
cagtgtcgggttagagtcgaggtcaatgaaccgtattatatgagagttggcaccatccag
ccacaggtctttgattgcatgcacttcatggagagtaatgtccgttactaccactcgggg
aatcccctgctggatcaggacgtcatcaaattcattgcgtataaactgaacgagacacac
accatcacggaacagtttgattttagggtagacatcaccaccgaggataatatgctgata
ttcccaatggctcaactggaagtttccgaattttttggcgattcggagataatcaatagc
agcgttctgactttcatgtacgaacgattgccaaacgtatcgtgtcaagtcagtataaac
acgctccgggacggatacccaaaatatggcgagctgatcagaggggtgggagaagaggaa
cagacagtgagggcgctgcagatatcgtgcgacgagttcctgagaatcggcttaaaatat
cgacatctagcaccgccgacaccgaatcgagacttcatcgtactgtccgtggaagtcctg
gaccctaacatccagacagagtcaatgcttgagaagtattacctccccgtggaactctca
gcatgttttcccaatcagctgccagaggcgtcgctcatgagctccgagctcctccacgtc
gaccaattcatcctgacgaccctgacgccggacgtactatccgggatggacgacgaaagc
ccgaaggaagagataatcttccacatcgtggaaccgttggagcctcatgaaggtaagatc
gtccacttagatgaccacacgaagccggtgcagtcgttctcccagtacgacctggagcag
atgaacatcggttactcccctccgactaccagcttcacggagcagcaggtgttcaggatg
agcctgttggtctacgattcgttcttcgaggagagcagactgatacaggtcatgttcgcc
gtgcgccccgcttacaccaatgcgcctcgcgtggcggtgaatacgggactgacgatgctg
gaggggcagtcacgggcgataaagaacactgacttccgaatagtggacaaagacagctta
ttcatagtccgtgctaagatcgtgggtggtatgcgacacggacatatcctggtcaacaac
agacgtgctctgatgttcagtcaagccgatattgaccgcggggctgtggtctaccaacac
gacgatagcgacaccctgaaggacagcctggagctgagaatcaccgacggccgtgactcg
atcagagccacgatacccatcaacatcctcccgaaggacgacacgccaccttacctgatc
aacaacgtagaattagaggtcaccgagggtgagaccgtacgcatctcgcgattctccctg
ctgggcaccgataaagattcctcggacgactacatcatatacaggatcgtggagccgcta
gtcggcggagagatcctgaagaaatatgcagagcaatcgtacggttaccccgtcatcgag
ttcagtcagagggacctgctacgaggacagatctactatcagcattttggcaacgaggtg
ttccaggacagtgtcaacctgatcctggtggataataacttcccccccaacgaatccccc
ctgcagatcttcaacgtccagatagagcaggtgcacgacctgcctccggagctctgtccg
aggaccagactgtccctgcaggtgttggagacagaggtggtccacatcaccaaacagatg
ctctgcttcaccgacggcgaatccgatgacgaggacctcctgtacacggtgaccacccct
ccgtacttccagacgacccacagcctgacggatgccggcaggctcttctctacggcaggg
ttacccatggtgatgaaggaccctagggcgccggccattcggtcattcactcagggagat
atcagcgataggaccgtggccttcatgccaccgttcaaggaaggaggacccgtggaacgc
accgtcgagttcgtcttctccgtctcagatccgttcggtaacgtcatcttgggtcagatc
ttcgaagtgacggtgctccccgtcaataaccaagaaccgaccatctacatcactgatttt
gtggttcaggaaggtggtaccatcacatttatgccaatgaccatgaccgtggctgatatg
gacaccctcgcccagcagttgatggtgatcctggtttcggaaccctctcttggcatcttt
caagttggggagagaaatctgaccagtggagaagcattttcagtcatagacattatgact
ggcttggtcagatatgtccatggtgggagtgacagtcttcaggatgagtttactatcgct
gcctctgatggtgtcttcactgtatatcaagatgtacccatcaccgtcatgcctttaaat
gatgagctacccacactcagaccgggactgaccagcaagttggtcaccttggagggagga
caggtcgctatcgggtcagacgttctatcagcaaccgaccctgataccaatgacttggta
cttcagtatatagtggttcagcatcccctcagaggggttatcctgaagggagggcttgtg
gtgaaccggttttcccagaaggacgtcgacgacggccttatcacgtaccatcacaccgcc
ggcgagattggtctcaccaaggtgcaggacactgtgacattcctagtttcagacagtagt
gtcccaacagatgaaaatctgccgacccaccgggtaacgataagtgtcacaccggtggat
aaccaacatccgggaatcatcttcggtaatcctttcttcgttctggaaggacagaagaat
agtctgacggccgacatcatcagcgcactagacagagattccaccaccgatcagctgaca
ttccacatcactcggcaacccgaatggggctacgtcgaaaacgtacggccaaatccaggc
tcggagaagagcaacgcggggacgcctgtggactcctttacattcgacgacattcaagaa
ggggacattaagtacgttcagtcggtccaccaggcggtcgaacccacctccgacagtttc
gtcctctacgtatccgacggggagagagcctcgccaaacgtcacattcctggtgaacgtc
aatcccagaaacgacgaaaagcccaccatgagagtcacaaacttcacggtgtacgaaaac
tccttctataaaatcttgcccaatttcatgacggtgggagacttggacattccaatggag
atgctgctcttctccataatggacgccccgaggcacgggatgctggtagacagggcggtg
gacgactcggtaccggtctacgacttcaatctcaatcagttccagaacaccatgaagcta
gcctacgtccacgacgggtccgagagcacctcggacagcttcgacatccgtgtcagcgat
gggaaacacgttctacggaggacggcctatgtcaccatcgtcccggtcaacgatgagaga
ccacaggtgatcaaaaacgctggacttgagttgagcatacacgaacacaggttaatatca
ccgctggttcttctgacgagtgatctagacacccccgacgaggatctcatcatactcatc
cactctctgccgcagcggggtcgtctgcaacgtaaagtctccgtagatgtatgggaggac
ataacgacgttacccacaaacttcacccagagggacgtcaacctgaatctcatacgttac
cagcacgtcggggatctgggaaccaaaggtatcgatcggttccggttttccgtcaccgac
ggacagtataagaccgggaaggaaacgttccggatcgtggtggaggggacgaagagactg
ccattggaggtatggaaccagggtctacgagtcagagaagcctcctacaaggtactcaca
ccagatcatctctccgccacggaccacagcgatcagatagattccatcttatatacagtc
ctgaccgatcctacggaaggtcaactagaggacgtctccaggccaggagttcccctcgca
tcgttcacgcaggtcgacctgatcggtcagaggattatttacaggcaccttcggacggac
agagtgaccaacgacgccattacgctcagcatcggtaacggatacgaaacccgaaacgat
accttccacatagctgtcatagaggtggataactctctcccgggactgatcgtgaatgaa
ccgatctcggtcgtccagtggggggtcgaggtgataacgctatcgaatttacaggctata
gatctggacacgaacccgtctagaatcgcatacatcattacacaatttccgacgtctggc
cgattattgttatcgggtcaacccatcttacatagcttctcccagttggacgtagacaac
ttggaggtctcctatcgtcatgaagtcggagattcggatcaggacgggttctacttcatc
gtcacggacggaaccaacgaaggcttctccaccggggacggagtcacaaaccaacctagc
agattttctatccagatagaccacatcgattcgtccccgcctcatatcaggaggatggag
gtaccccaaaagatggagacagtccactccaataacggcttcatcctgagcaacatggtc
ctccacagcgaggacgaatgcggcagcgagggcatcctctacatcgtcacccgggaacct
tccttcggacactttgagaacacggagaccagacaacgaatccagaggcagttcactcaa
gaggaagtcgatcagcgtctgatcatgtacgtcatcagagaggaggcccaggccaccaat
gacagcttcaccttcgaaattcacgattgtgcaggcaatgctgttgtcaacaagaggttt
gacttcagctggtcgttgatcacatttccagagtccatcattcaggtgtgtgagacccaa
ggcgtgctccccattcaggtcgtccgtgtgggcaatccgtttgtgtcctcgttcgtcggc
atacgctccgttcagatgacagccaatcgcgacgaggattacgtggagcctcgagccaat
cagcttcagtttgatccattcgagaccgtcgccatttggaatgtccagatcgtagaggac
gacctggaagagaatcgtgagcggttcagagtcagactacaggaacctttcaatgcactc
ctgggggaattccccaaaatggttgtagtcatcaagaatgcagtggatgggtattgtgca
ggagagaaccctgttgtagttgatggagatagtggtggaggtggatgttgtgacgggggt
caaccaccgccacatggtggattacctgacaccactgatccccaacagaggctaccattt
caacctcctgtcaacatccaacccattcctgactttcaatacgagaatagagagttacca
gataccccctttagaaggccattggaacccccatttgaacgacccctttaccctaacagg
gactttgttgacccacacaacccacattacgaccaaagaccaattggtgaaatccctgtt
gagggtgagtgctgtcccccaaatccaccgttttatcagaacccgtttggacagcccgac
gggagtcacctccctccacttggccaccagggggatactccacctcgtaatcctgacctt
caagatgtatttgacaatcctgcttggcgtcatgcgcttggaggggatgcaccaccgaac
gcccacaatgttcccagcgatttatcatttgaggtgttcggtaacagacgaactggtaac
ggacaatcatcatccagtgatggggttcttgatcatatctttgcaccctctgtggttcat
ggaaggcaagaacaaccttccaggcctgacggagaattcagctcttcctcagatggcact
gacctgtcccagtttctacaagaaagggagtcttccgatccggcctggattgccaaggtg
ctgccctgttcaggtctaaacgagggtgaagtacgtctccatcatctaacaggaagttat
ttcatgtgtgacggtgcaagctggcagaaagtatctgtcctctcgtccgattctgagccc
gaggctgagggcaggtgcgaggaaggttggatatttcaccagcagaggtgttacatgcta
tcaaactcggcaaggacctgggacagagctcagagacgatgtggggaaaggtataacggt
catctcgtcagcatcctctcggcagatgatcagaacttcatcaggagcatgatgtccggt
ctcgatgtctggattggtctcaacgataaaaaccgagagggtcactgggagtggatctcc
ggggatcaaatttcgttctcgagatggaagccaaataccaagtccaagaggcgagaccaa
aggaactgtgtctatatgaacactcgattcagatgggtggacgacgtctgcgatatggac
gtcaggcggtttatttgtatgaaagacgcagtcttttaa
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integrated database retrieval system
