Apostichopus japonicus (Japanese sea cucumber): 139982457
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Entry
139982457 CDS
T10891
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2-like isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03020
RNA polymerase
Brite
Enzymes [BR:
ajj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
139982457
Transcription machinery [BR:
ajj03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
139982457
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139982457
NCBI-ProteinID:
XP_071851452
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Position
16:complement(25931507..26091502)
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AA seq
1161 aa
AA seq
DB search
MSSSTKLLEQNPKDYMEHGAVRKRKGPYLKWKTKVPMPLNSDDQLTALVDKWKLLPAFLK
VRGLVRQHIDSFNYFINVEIKKIMKANERVTSDADPNFYLKYMNIYVGSPDVEEGFNITK
PISPHECRLRDMTYSAPITVDIEYTRGTQRVIRKNLPIGRMPIMLRSSNCILTGKSPAEL
AKLNECPLDPGGYFVVRGSEKVILIQEQLSKNRMIVELDRKGMVSCNVTSSTHERKSRTV
VILKKGRHYIKHNSLTEDVPIVVVFKALGLESDQEVVQMVGTEDSLMSQFAPNLEECHRL
QIFTQTQALNYIGSKLRQRQRWGGQIKTKVDEARDLLTNTVLTHVPVVNFNFRPKCIYLA
LMVRRVIEAQGDSFKVDDRDYYGNKRLELAGQLISLLFEDLFKKFNSELKKIADQIIPKP
SRAALFDVVKHMRQDKITNGLNTAISTGNWSLKRFKMERAGVTQILSRLSYISALGMMTR
ISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDLDEQPITKV
AFNLGVEDVSLLSGEEVSSSEVYTVFLNGNILGVIKNYKKLIQDFRLLRRAGYINEFVSI
CPNHTHRCVYIASDGGRVCRPYIIVDRGKPKVLQKHINELTQEIRSFEDFLREGLVEYLD
VNEENDCLIALYESLITSETTHLEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAI
GTIAYNQRNRIDTLMYLLTYPEAPMVKSKTIDLIGFDKVPAGQNAMVAVMSYSGYDIEDA
LILNKASVDRGFGRCHVYRNQKCILKKYANQSFDRIMGPLIDGNTREVIWKHKVLDQDGI
CSPGERVTNKQVLLNKSMPVVTMSPIETGNKSEQQQQEFQDVPITYKGPVDSYIENVMIS
SNPEEAFLIKVLLRQTRRPEIGDKFSSRHGQKGVCGLIVQQEDMPFNDLGICPDIIMNPH
GFPSRMTVGKLMELLAGKAGLLDGQFHYGTAFGGDKVEDMCQDLIRHGYNYLGKDFFTSG
ITGEPLSAYIYFGPVYYQKLKHMVLDKMHARAKGPRAILTRQPTEGRSRDGGLRLGEMER
DCLIGYGASMLLLERLMISSDQFEVDVCGECGLLGYSGWCHYCKSSCNVSSLRIPYACKL
LFQELQSMNIVPRLKLKKYSE
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttctactaaattgttggaacagaatcccaaagattacatggaacatggtgct
gttcgaaaaaggaaaggtccgtacctcaaatggaaaaccaaggtgcctatgccgttgaat
tccgatgatcagctaactgctttggttgacaaatggaaactcttaccagctttcttgaag
gtccgtggccttgtgaggcagcacatcgacagtttcaactatttcatcaatgtggagatt
aagaagataatgaaagccaatgagagggtcacaagtgatgcagatccaaacttttacctc
aagtatatgaacatctatgttggaagcccagatgtagaagaaggattcaacatcaccaaa
ccaatctcccctcacgaatgcaggttgagagatatgacctactccgcaccaatcactgta
gacattgagtacaccaggggtactcagagggtcatccggaagaatttacctattggcagg
atgccaatcatgttacgaagttccaactgtatcttgacagggaaatccccagcagaacta
gctaaactgaatgaatgtccgttggatccggggggttactttgtggtcaggggttcggag
aaagtcatcctcattcaagagcagctgtcaaagaacagaatgatcgttgaattggaccgg
aagggaatggtgtcttgcaatgtgactagttccactcatgagaggaagagtagaactgtg
gtgatcttgaaaaaaggaagacattacatcaaacataactctctgactgaggatgttcct
attgtagtagtctttaaagctctgggtctagagagtgaccaagaggtggttcagatggtc
ggtacagaggactctctcatgtcacagtttgcaccaaatctggaagagtgccatcggctt
caaatattcacccaaacacaggcattgaactacataggtagtaagctcaggcagagacaa
cgatggggaggtcagatcaagaccaaggtggatgaggccagggatctactcacaaacact
gtcctcactcatgtacctgtcgttaacttcaactttcgccctaaatgcatctatctggca
ctaatggtgaggagagtgatagaagcccagggtgactcattcaaggtagatgacagagat
tactatggcaacaagagactagagttggctggccagctcatctcgctgttgtttgaggat
ctcttcaagaagtttaattcagagctgaagaagattgcagaccaaatcattcccaagccg
agcagagctgctctatttgatgtagtgaagcacatgagacaggataagatcaccaatgga
ctcaacactgctatatcaacaggaaactggtcattgaaacgtttcaaaatggagcgtgca
ggcgtcacacagatactgtccagattgtcatatatatcagccctgggtatgatgaccaga
atatccagtcagtttgaaaagaccagaaaagtgagtggacctcgttccttacagccatcc
cagtggggcatgctctgtccgtctgacacccctgaaggagaggcctgcggtttggtgaag
aatctggccttgatgactcacatcaccacggatcttgatgaacaaccgataaccaaagtg
gcttttaatcttggtgtggaagatgtcagtctcctatctggggaggaggtcagctcatca
gaggtgtatacagtatttcttaatggtaacatattaggagtcattaaaaattacaagaag
cttatccaggattttcggctcttgaggagggctgggtacatcaacgagtttgtgtccatc
tgtccgaatcatactcacagatgtgtgtacatagcatctgacggtggaagggtgtgtagg
ccgtacattatagtggacagagggaaaccaaaggtgctgcagaagcatatcaatgaattg
actcaagaaattaggagttttgaagatttcttgagagagggtctggtagaatacctggat
gtgaatgaagagaatgactgtctgatagctctctacgagtcactcattacaagtgaaact
acacatcttgagatagagccgtttacaatccttggagtttgtgccggactgatcccctat
cctcaccataaccagtcacctagaaatacctaccagtgtgctatgggaaagcaagctatt
ggtactattgcatacaaccaaaggaaccgcatagacaccctgatgtacctgttgacttac
cccgaagctccgatggtaaaatcaaagactatagatttgattggttttgataaggttcca
gctggtcagaatgccatggtggctgtcatgagttacagtggttacgacatagaggacgcc
ctcatcctcaacaaagcttctgtagacaggggatttggacgatgccacgtttaccgaaac
cagaagtgcatcttgaagaaatatgccaaccaatcgtttgaccgcatcatgggcccattg
atcgatggcaatactagagaggtcatctggaaacataaggtgctggaccaggatggcatc
tgtagtccaggtgaacgggtaaccaacaagcaggttcttctcaataagtctatgccggtg
gtaacgatgagtccaatagagacagggaataaatctgaacagcagcaacaagaatttcaa
gatgtaccaatcacatacaaaggcccagtagattcttacattgaaaatgtcatgatctca
tccaatcccgaagaagccttcttgatcaaagttttacttcgccagacgaggagaccagaa
ataggggataaattcagcagcagacatggacagaaaggagtctgtggtttaattgtacag
caagaggacatgccatttaacgaccttggtatctgtccagacattatcatgaacccccat
gggtttccttctcgtatgactgtgggtaaactcatggagctcctggctgggaaggcaggc
cttctagacggacagttccactatggaacagcattcggtggtgacaaagtggaagacatg
tgccaggatttgatccgacatggctacaactaccttggcaaagacttcttcacgtcagga
atcacgggtgaaccattgagtgcttacatatattttggcccagtctactatcagaagctg
aaacatatggtgttggataaaatgcatgccagggccaagggacccagagccatccttacc
agacaacccacagagggaaggtcaagggatggtggtcttcgcctcggagagatggaaaga
gattgtctgattggctacggagccagcatgctgctactggagcgtctaatgatctccagt
gatcagttcgaggtggatgtctgtggcgagtgtggcttgctgggttactcaggatggtgt
cattactgcaagtcgtcttgtaacgtctcctctctcaggattccgtacgcctgtaaactc
ctattccaggagttacagtccatgaacatagtaccgagactcaaactaaaaaaatactca
gaatga
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