Apostichopus japonicus (Japanese sea cucumber): 139982672
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Entry
139982672 CDS
T10891
Name
(RefSeq) LOW QUALITY PROTEIN: probable proline--tRNA ligase, mitochondrial
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139982672
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ajj01007
]
139982672
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ajj03016
]
139982672
Enzymes [BR:
ajj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
139982672
Amino acid related enzymes [BR:
ajj01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
139982672
Transfer RNA biogenesis [BR:
ajj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
139982672
Prokaryotic type
139982672
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
Motif
Other DBs
NCBI-GeneID:
139982672
NCBI-ProteinID:
XP_071851812
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Position
2:22857898..22868458
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AA seq
440 aa
AA seq
DB search
MSGIRHCMSRMFHPSVVLPSGTRQSDIVCKSQRLMLEAGLIRQSSPGTFHLLPLALKSLE
KLTHLIDSEMRNLGGQKIAMPTIGSGTLWKKSDRWNSMGAELFKLKDRHGTDICLSPTHE
EAVTDILAAEPNLSHKHLPLKFYQITSKFRDEPRPRYGLLRGREFLMKDMYTFDVSVDAA
RTTYETICDAYHRVFGQLGLDAIQAAGDSGAIGGDVSHEFILPASIGEDTIHHCPRCGFA
ANTETTTSDGPPCEQNLSKPSCKMXSKKTGIELGHAFLLGQKYSKVFGAKFSDTSGTKRN
CEMGCYGLGVSRIMAASIEVLSTEEDVRWPVAIAPYQVCIIPPKEGSKEEVRGLAEDLYD
EVCLSLPHLKDDILLDDRISQTIGRRLKDCRKKGFPFAVIVGKKATGHPPEYELHVTETN
SSSFVTKDELLSYLKSNTSR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaataaggcactgtatgtcccggatgttccacccatctgttgtattaccatct
ggaactagacagagtgacatcgtttgcaaaagtcaaaggttgatgctagaggctggtctc
atcagacagtcatcacctgggactttccatctccttccattagctctgaaatcgttggaa
aaattgactcatctcattgacagtgagatgagaaacttgggtggtcaaaagattgcaatg
ccaacaattgggtctggtactctttggaagaaatcagatagatggaattcaatgggagct
gaactcttcaagttaaaggatagacacggcaccgatatctgccttagtccgactcacgag
gaggctgtgactgatatactagcagccgaacctaacttaagtcataagcatctaccttta
aagttttatcagattacctcaaagttcagagatgagcctcgaccacggtatggtttactg
agaggaagagaatttttaatgaaagatatgtacacatttgatgtttctgtggatgctgcc
cgtaccacatacgaaaccatatgcgatgcatatcacagagtatttgggcagcttggtcta
gacgcaatacaagctgctggtgattccggtgcaatagggggcgacgtctctcacgaattc
atcctaccagcttctatcggggaagacaccatacaccactgtccgagatgcgggtttgct
gccaacacagagaccaccacatcagatggtcctccttgcgaacaaaacctctctaaacca
tcttgcaagatgnngtcgaaaaaaaccggcatagaactaggccacgctttcctgctgggc
caaaaatattccaaagtttttggtgctaagtttagtgacacatcggggacgaaaagaaat
tgtgagatgggatgttatggtttgggtgtttcacgtatcatggctgcatcaatagaagta
ttatctaccgaggaggatgtcaggtggccggtcgcgatagctccctaccaggtgtgcatt
ataccaccaaaggaagggagcaaagaagaggttcgtggattagcagaagatttatatgac
gaggtctgcctctcgttaccccatctcaaggacgacattttattggacgacaggatatcg
cagacaattggaaggagattaaaggactgtagaaagaaaggatttccttttgccgtcatt
gttggaaagaaggctacaggacatcctccagaatatgagctacatgttacagaaacgaac
agtagcagctttgttacgaaagatgaacttcttagttacctgaagtccaacacatcccga
tga
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