Apostichopus japonicus (Japanese sea cucumber): 139984079
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Entry
139984079 CDS
T10891
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2-like isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
Protein phosphatases and associated proteins [BR:
ajj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139984079
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
139984079
mRNA cycle factors
Stress granule specific factors
139984079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139984079
NCBI-ProteinID:
XP_071853867
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Position
17:33448487..33467106
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AA seq
826 aa
AA seq
DB search
MANNQPSANPSTGETKPSPAQQPGILPISVEMIALQTTEECKEGNLAAVQSKGSGDAGGA
IKEASAPGAAQQEGMANSKESTPMGLLNSVARYNNMKPNYELIQEEGPAHQKMFSVQLTF
GDEKYKGTGTSIKRAQHDAAQKALDSCKLPTPERKEKPTGYKLLRSPNKNALTPTVQLNS
YSLKTGVTVDYAVLNSYPSYPPGGFRRPPYQQHRYSNSTTAPPPTQGGGGGDSRPKEQDG
NVVNTFHGEPRQGNPVPFPGPPAGGGVGPRPRGPRGPGQHHYNYMHYSPYEMRPMYRQRY
RRPYPQVFNVKLTVGNREFVGQGANQRLARQDAAGKAMKSIEESPIPVKKDQATSMLEEE
KKETATSASGDAPNNNKSEISQVYEVANFNGLNLEFKVLDESGPPHQKEYKIQCTVGNIT
VVETGTSKKESKRKAAAAVLPKLKSLPPPVKTVRQGPRMGWKPAYKRSTIQKKSADDSDF
GAVGMNPISRLVQICQAKKMKDPFFEVLNDQPIPDRRVHPTIYRHIFTMKVSVGEQSAEG
KGSTKKEAKKEAAEGMLVLMGYKPSNPDTPIPIPGADATPGKPALKQPQENREVKKQEEE
AQNNDRKVTFQDDQVKAGLTVKKEEEVEKPELVPGSQQGPQIPGITPGLFPMMPGIKPIQ
HPFPQQPPVQQPPTQALNRAPGAPVSTPLSAPRKTFNPALTADIASELLLTQRSMTAQTI
LQSSNLPIKLQTSRPQHMLEYMGAVTGLDVAFNDYPQSTQNEFLTEVRISTEPPVVFHGT
AQTMDAAHDLASLNVLRALAGCPPEEANRVVAQNRSMVQGIGINSQ
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggccaataaccaaccctctgcaaacccgtcaactggggagactaagccctcacctgct
caacagccaggtatcctaccgatatcagtagagatgattgccctccagacaaccgaagaa
tgtaaagaaggcaacttggctgcagtgcagagtaaaggaagcggggatgctggtggtgcc
atcaaagaggcctctgcaccaggagcagcccagcaagaaggcatggcaaactccaaagaa
agcacccccatgggcctcctcaactcagtcgcccggtataacaatatgaaacccaactat
gaactgattcaggaggagggtccagcacaccagaagatgttctccgtacaactcaccttt
ggggacgagaagtacaaaggcaccggcaccagcatcaagagagcccagcacgacgcggcc
cagaaggccctggacagctgcaagttacccacccccgaacggaaggagaaacccaccggc
tacaagctgcttcgatcgccaaataaaaatgccctcaccccgacagtgcaactcaacagc
tattccctcaagacgggggtgaccgtagactacgccgtcctgaactcatacccctcttac
ccgccggggggtttcagacggcccccgtatcaacagcatagatattcaaacagcacgacc
gcaccaccaccgacgcaaggaggaggaggcggcgattcacgcccaaaggagcaggatggt
aatgtcgtgaacaccttccatggagaacccaggcaaggtaaccctgtaccgttccccgga
ccacccgccggtggtggcgttgggccgagaccccggggcccgcgagggccaggacaacac
cattacaactacatgcactattcaccctatgagatgaggccaatgtatcgacagagatat
agacgcccatatccccaggtgttcaacgtcaagttgacggtcggaaaccgagagtttgtc
ggacagggagcaaaccaacggctagccagacaagatgccgccggtaaggctatgaagtca
atcgaagaaagtccaattcctgtcaagaaagatcaggctacatccatgctggaagaggaa
aagaaggagactgccacatcggcctctggagatgctcccaacaataacaaatctgagatt
agccaggtttatgaagtggccaattttaatggactcaacctggaatttaaggtccttgat
gaaagcggacctccccatcagaaggagtacaagatacagtgcactgtcggaaacatcacc
gtggtagagaccggcacctccaagaaggaatccaagcgaaaggctgcggccgctgtcctc
ccgaagctaaagtccctcccaccgccggtcaagaccgtccgccaagggcctcgaatgggt
tggaagccggcgtataagaggtccactatacaaaagaagagtgccgatgattctgatttt
ggtgccgtgggtatgaaccccatcagtcgtctcgttcagatttgtcaggccaagaagatg
aaagatccgttcttcgaggtcttgaacgaccagccgatacccgatcggagagtccacccg
acaatctatcgccacatctttaccatgaaggtgagtgtaggagaacaatcagctgagggg
aaagggtcaaccaagaaagaggctaagaaggaagctgcagagggtatgttggtcttgatg
ggttacaaaccctccaatccagacacccccatccccattcctggtgcagacgctactcca
ggaaaacctgctctcaaacaacctcaagagaacagagaagtgaaaaagcaagaagaggaa
gcccagaataatgacaggaaagtgacctttcaagatgaccaggtcaaagcaggcctaact
gtaaagaaggaagaagaggtggagaaaccagaactggtccctgggagtcaacaaggtccc
cagatccctggtattacaccaggtctatttccaatgatgccaggcatcaaacccattcaa
cacccgttcccccagcagcccccggtgcaacagccgccaactcaagctctaaaccgcgct
cctggtgcaccagtttctacccctctctcagcaccccgtaagacctttaacccagccctc
acggcagacatcgccagtgagttgctgttgacccagcggtcaatgacagctcagaccata
ctacagtctagcaacttgcccataaaactgcaaactagtagaccacagcacatgctagaa
tatatgggagctgtgaccggactagatgtagctttcaacgattatccacagagcacccaa
aacgaatttttaacagaggtgagaatatccacggaaccaccggtcgtgtttcacgggacg
gcgcagaccatggacgccgcgcacgatcttgcctcgctgaacgtcctgcgggccttggcg
ggatgtccaccagaagaggccaaccgggtggtagctcagaatcgttccatggtgcaagga
atcgggataaactcgcagtga
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