Artibeus jamaicensis (Jamaican fruit-eating bat): 119034674
Help
Entry
119034674 CDS
T07223
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ajm03037
]
119034674 (CCDC88A)
Cilium and associated proteins [BR:
ajm03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119034674 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
Motif
Other DBs
NCBI-GeneID:
119034674
NCBI-ProteinID:
XP_036981652
LinkDB
All DBs
Position
Unknown
AA seq
2032 aa
AA seq
DB search
MSCKMENEIFTPLLEQFMTSPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQIN
PKSESQRVNKKVNNDASLRIHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQ
GTEEVKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWM
EVTDMSQEEIEPLLKNMALHLKRLIDERDEHSETIIELSEERDGLHFLPHSSSSAQSPCG
SPGMKRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMETELKRLQQENM
NLLSDARSARMYRDELDALREKAIRVDKLESEVCRYKERLHDIEFYKARVEELKEDNQVL
LETKTMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLE
MAQKQSMDESLHLGWELEQISRTSELSEAPQKSLGHEVSELTSSRLLKLEMENQSLTKTI
EELRSTMDSAEGNTSKILKIEKENQRLSKKVEILENEIIQEKQSLQNCQNLSKDLMKEKS
QLEKTIETLRENSEKQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESI
KETSSKLSKIEFEKRQIRKELEHYKEKGDRAEELENELHHLEKENELLQKKITNLKITCE
KIEALEQENSELERENRKFKKRLDSFKNLSFQLESLEKENSQLDEENLELRRNVESLKCA
SMKMAQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALENSN
KKIQQLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEK
ENKRLRQQAEIKDTTLEENNVKIGNLEKENKTLCKEIGIYKESCIRLKELEKENKELVKR
ATIDIKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDSRYKL
LESKLESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERM
LQSPPSTSGEDSKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQN
NNLQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLE
NENESVIKEREDLKSLYDSLIKDHEKLELLHERQASEYESLIAKHGSLKSAHKNLEVEHK
DLEDRYNQLLKQKGQLEDLEKTLKVEQEKMLLENKNHETVAAEYKKLCGENDRLNHTYNQ
LLKETEVLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQL
KGNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEK
IMDQYKFYEPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSSEGFLQLPH
QDSQDSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLV
QSMVLAGGQWTGSTENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSTGFRSKQLVN
NKDTTSFEDISPQGISDGSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVHIQ
SRPQSHSSGEFSLLHDHEAWSSSGSSPIQYLKRQTRSSPVLQHKMPETLEGRAHRKIKTG
SPGSEVVTLQQFLEESNKLTSIQIKSSSQENLLDEVMKSLSVSSDFLGKSKPVSCGLARS
VSGKAPGDFCDRRTTKPEQCVRPVPQRSEDTYFISSSGKPTPSTQGKIKLVKESSLSRQS
KASNPYATLPRASSVISTAEGTTRRTSIHDFLTKDSRLPMSVDSSPATADSNITAASSEY
PLHQWSSHTLHSPTHSVGSHSQIGLVTEVPEPLVQARNLSEKSHFLSQSFTTINISNDTF
RISAKDSLESFTVAHPAQPFLSLNTELVSNISGLPPRPVTRVTDQASASFDKATQKDNKQ
FSDHQNPSNSNTQSSLDSNVLITSACLCPDDTEAALLVSEDNQTVWYEYGCV
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtaaaatggagaacgaaatttttactccccttctggagcagtttatgaccagt
cctttggtcacttgggttaaaacgtttggacctctggctgcaggaaatgggaccaacctg
gatgaatatgtggctttggtagatggagtgttcttgaaccaggtcatgctccaaattaat
cctaaatcggagagtcagagagtaaataaaaaagtcaacaatgatgcctcacttagaatt
cataacctatccattttggtgagacagataaaattttattatcaggagactttgcagcaa
ttgatcatgatgtcattgccaaatgtcttaatcattggcaaaaaccccttttctgaacaa
ggcacagaagaagttaaaaagttgcttttacttttgctgggttgtgcagttcagtgtcag
aaaaaagaagaatttattgaaagaattcaaggtttagattttgatacaaaagctgcagtt
gctgcacatattcaagaggtaacccataatcaggaaaatgtgtttgatcttcaatggatg
gaagtgactgatatgtctcaggaggaaatagaaccactattgaaaaatatggcgttgcat
ctaaaaagacttatagatgagagagatgaacattcagagactatcatagaactctctgaa
gaacgggatggtcttcattttcttccccattcctcttcatctgcccaatcaccctgtggt
tctccaggcatgaagcgaacagaaagtcgacaacatctgtcagtggaactggcagatgct
aaggccaaaataagaaggcttaggcaggaattggaggaaaagactgaacagttgctggac
tgtaaacaagaactcgagcaaatggaaacagaactaaaaaggctgcagcaagagaacatg
aatttgctgtccgatgctcgttctgcgagaatgtaccgagatgaattagatgcacttcga
gagaaggcaatcagagttgataagcttgaaagtgaagtctgtagatataaagagaggcta
catgacattgaattttataaggcaagagtcgaggaattaaaagaagacaatcaagtttta
ttagaaacaaaaaccatgttagaagaccaattagaaggaactcgagctcgttctgataaa
ttacatgaattagaaaaagagaatttacaactgaaggctaaactgcatgatatggaaatg
gaacgagatatggatagaaaaaaaattgaagaattaatggaagaaaatatgactttagaa
atggcacaaaagcaaagtatggatgaatcattacatcttggctgggaattggaacaaata
tccagaactagtgaactttctgaagcaccacaaaaatcattgggccacgaggtgagtgag
ttgacatcaagtaggttattgaagttggagatggaaaaccagagtttgacaaaaaccata
gaagagcttcggagtactatggattctgcagaaggtaacacttccaaaatactgaaaatt
gaaaaagaaaatcaaagactaagtaaaaaggttgaaattcttgaaaatgaaattattcaa
gaaaagcaaagtcttcagaattgtcaaaatttaagcaaggatctaatgaaggagaagtct
cagcttgaaaaaacaattgaaacacttagagaaaattcagagaaacagattaaaatattg
gaacaggaaaatgaacatctgaatcaaactgtgtcttccttaaggcagcgctcccagata
agtgctgaagcaagggtgaaagacattgaaaaagaaaataaaattctccatgaatctatc
aaagaaacaagtagcaagctaagcaagattgaatttgaaaaaagacaaattaggaaagaa
ttggaacattataaagaaaaaggagatcgagcagaagaacttgaaaatgagttgcatcat
cttgaaaaagaaaatgaattgttacagaaaaaaataaccaatttaaaaattacctgtgaa
aaaattgaggccttagaacaagaaaattcagagctagaaagagaaaatagaaaatttaaa
aagagattggatagctttaaaaacctttcttttcaattagaatccctagagaaagagaat
tcccaacttgatgaggaaaacttagaactccgaaggaatgtggaatctttaaagtgtgca
agtatgaaaatggctcagctacaactagaaaataaagaactagaaagtgaaaaagagcag
cttaagaagggtttagagcttatgaaagcttctttcaagaaaacggaacgcttagaagtt
agctaccagggtttagatacagaaaatcaaaggctacagaaggctctggagaacagcaat
aagaaaattcagcaattagaaagtgaactacaagacttagagatggaaaatcaaacattg
caaaaaaacctagaagagttaaaaatatctagcaaaagactagaacagctagaaaaagaa
aataagtcattagagcaagagacttctcaactggaaaaggataagaaacaactggaaaag
gaaaataagagactccgacaacaagcagaaataaaagataccacattagaagagaataat
gtgaaaattggaaatttggaaaaagaaaacaaaactctatgcaaagagattggtatttat
aaagaatcctgcattcgtctgaaagaattagagaaagaaaataaggagcttgtaaaaagg
gcaactattgatataaaaactttggttacattacgtgaggatttggtgagtgaaaaatta
aagactcaacaaatgaataatgatctcgaaaaattaacccatgagcttgagaagataggg
ttaaataaagagcgactcttacatgatgagcaaagtactgatgacagtagatacaaactt
ttggaatcaaaattagaatccactctaaagaagtctcttgaaataaaagaggaaaaaatt
gctgctttagaagctcgattagaagaatctacaaattataaccagcaattgcgccaagaa
cttaagacagtgaaaaagaattatgaagcccttaaacagagacaagatgaggaaaggatg
ctacagagccctccttcaacttctggtgaagatagcaaatgggagcgagaaagtcaagaa
acaaccagagagcttctaaaagtaaaagacagattaattgaagtagaaagaaataatgct
acactgcaagcagagaagcaagcgctgaaaactcaactgaagcaacttgagacacagaac
aataacttgcaggctcagattcttgcacttcagaggcagacagtgtcattacaggagcag
aacactactcttcaaacacagaacgccaagcttcaggttgaaaactccacacttaattcc
caaagtacttctcttatgaatcagaatgcacaactcctaatccagcagtcttccttagaa
aatgaaaatgaatctgtaatcaaagaacgagaagacctgaaatctctctatgattctctg
attaaagatcatgagaaactggaacttcttcatgagcgtcaggcttcagagtatgaatct
ctgattgctaaacatggaagtctaaagtctgcccacaaaaatcttgaggtggaacataaa
gaccttgaagaccgttataatcagctactaaagcagaaaggacaattggaagatttggaa
aaaacactgaaagtagaacaggaaaaaatgctgcttgaaaacaaaaaccatgagactgta
gctgcagaatacaagaaactttgtggtgaaaatgataggttgaatcatacatataatcag
cttttaaaagagaccgaagttttacaaactgaccataaaaacttgaaaagtcttctaaat
aattccaaactagagcaaacaagattagaagctgaattttcaaagctaaaggaacaatac
caacagttggacattacatccaccaagctaaataaccagtgtgagttgttaagccaactt
aaaggaaatttagaagaagaaaatcgacatctactagatcaaattcagacattaatgcta
cagaacagaacactgttggagcagaacatggaaagcaaggatctttttcatgttgaacaa
agacagtacattgataaattaaatgaattaagacggcaaaaggagaaattagaagagaaa
attatggatcaatacaaattttatgagccatctcctcccagaaggaggggcaactggatt
actctaaaaatgaggaaattgataaagtctaagaaagatattaatcgggaacgtcagaaa
tctctaacattaacacctacccgctcggactccagtgaagggtttcttcaacttccccat
caagatagtcaagatagttcttcagtaggttcaaattctctagaagatggccaaactttg
gggaccaagaaaagcagcatggttgcactgaaaagactgccctttttgaggaacagaccg
aaggataaagacaaaatgaaggcctgctaccgtcgttccatgtccatgaatgacctggtg
cagtccatggtcctagcaggaggacagtggacaggtagtactgagaatttggaggttcct
gatgatatttcaacgggtaaaaggagaaaagaattgggagctatggccttctctactaca
gctatcaacttttcaactgtcaactcttctacaggcttcagatccaagcagttggttaat
aataaagatactacatcctttgaagatataagtccacaaggtattagtgatggttctagt
acgggatcaagagttcatgcttcaagaccagccagccttgatagtggcagaacatccact
agcaatagcaataataatgcttcacttcatgaagtcaaagcaggtgcagttcatatccaa
agcaggcctcaaagccacagcagtggagaatttagcctacttcatgatcatgaggcttgg
tccagcagtggtagcagtccaatccagtacttgaaaagacaaaccagatcaagtccagtg
ctccagcacaaaatgcctgaaacgttagagggtcgagcacatcgcaagatcaaaactggt
tcccctggaagtgaagtggttactctacaacagtttttggaagaaagcaacaagcttacc
tcaatacagataaagtcctcaagtcaggagaatcttttagatgaagtaatgaaaagtttg
tctgtctcttctgactttttgggaaaaagcaaaccagttagctgtggtctggccaggtca
gtaagtggaaaagccccaggagatttctgtgatagacggacaactaagcccgaacaatgt
gtgagacctgttcctcaaaggagtgaagatacctactttattagctcttcaggaaaacct
acaccgagtactcaaggaaagataaaattagtgaaagaatcttctttgtcacgacaatca
aaagctagtaatccttacgccactttacctcgtgcaagcagtgtgatctctactgccgaa
ggaactactcgaaggacaagcatccatgattttttgaccaaggacagtagactacctatg
tcagttgattcatcaccagctactgctgatagcaacatcactgccgcatctagtgagtac
cctttacaccagtggtcctcccatacacttcacagcccaacacattctgtaggttctcat
tcacaaattggtttagttacggaagtgcctgagcctcttgtccaggctagaaacttgtca
gaaaagtcacattttctaagccaatcttttaccactattaatatatctaatgatacattt
agaatatcagctaaagatagcctagaatcatttactgtggctcatccagctcagccattt
ttatccctgaacacagagttagttagtaacataagtgggttacctcccaggccagtcacc
agagtaactgaccaggcttccgcctctttcgataaagctacacagaaagataacaaacag
ttttctgatcatcagaaccctagtaacagtaacacgcagtcttctttagatagcaatgtt
cttatcacttctgcatgcctctgtcctgatgacacagaagctgcattgttggtttctgag
gataatcaaactgtttggtatgaatatggttgtgtatga
DBGET
integrated database retrieval system
