Artibeus jamaicensis (Jamaican fruit-eating bat): 119035835
Help
Entry
119035835 CDS
T07223
Symbol
COL5A3
Name
(RefSeq) collagen alpha-3(V) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm04820
Cytoskeleton in muscle cells
ajm04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119035835 (COL5A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
119035835 (COL5A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ajm00536
]
119035835 (COL5A3)
Glycosaminoglycan binding proteins [BR:
ajm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119035835 (COL5A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
119035835
NCBI-ProteinID:
XP_036983215
LinkDB
All DBs
Position
Unknown
AA seq
1748 aa
AA seq
DB search
MGARGEPGQPRAGLCLFLALLRLLPRTQAADPVDVLKVLGVRGGQAGVPEVPGFCPQRAP
EGDRAFSVGKASTLGAPTWELFPDGHFPENFSVLITFRAQPANQSVLLSVYDEGGARQLG
LVLGPGLGLLGGPFRPLPDQFNLMDSRWHRVAVSVDGSTVTLVADCEPQPPVLGQGPRFI
STGGLIVLGTQDLGEESFEGDIQELLISPDPQAAFQACEQYLPGCDHLAPTATGVPQGEP
ETPPPQRKRKGKGKKKGRGRKGKGRKKKNKETLTLAPSLGSLENQTSTDIPKMETAAPTL
PPMPTPLVVTTTVTIGRNVTTLEEGLDPDRGTEPGTLETELAREEEEGGGSTMGPDFRAA
EQSSRAQFQIFSGAREKGAKGEPAVIEEGQQFEGPPGAPGPRGVVGPSGPPGPPGFLGDP
GPPGPAGLPGIPGIDGVRGLPGTVIMMPFQYASGSLKGPPVSFQQAQAQAILQQAQLSMT
GPPGPVGLTGRPGPVGLPGYPGLKGEMGEMGPQGPRGLQGPVGPPGRQGKMGRSGADGAR
GLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHTGQPGPPGEDGERGAEGPPGPTGQAGEP
GPRGLLGPRGSPGPLGSPGAVGIDGAPGAKGNVGPPGEPGPPGQQGNPGSQGIPGPQGPI
GIPGEKGLPGHPGIPGLTGSDGPPGHPGHEGPTGEKGAQGPPGSAGPRGYPGPRGVKGTS
GNRGLQGEKGEKGEDGFPGFKGDGGLKGDWGPPGPPGPRGDDGPEGLKGQGGLPGEEGPP
GSAGEKGKLGVPGLPGYPGRPGPKGSTGLPGPLGPLGEKGKRGKAGQPGLEGERGPQGSR
GERGQPGATGQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGPKGPPGPPGKDGRPGHP
GQRGDLGFQGQTGPPGPAGVVGPQGKTGEAGPLGERGPPGPPGPPGEQGLPGLEGREGAK
GDLGPMGPLGKEGPPGPMGFPGPKGAPGDPGPIGLKGDRGPPGPTGANGSPGERGPVGPA
GGIGLPGQSGSPGPVGSTGEKGSPGERGPPGPTGQDGIPGPLGLPGPPGAAGPSGEEGYK
GEVGTPGHKGSKGDKGDAGPPGPAGIRGPAGHPGSPGADGAQGRRGPPGLFGQKGDDGVR
GFMGVIGPPGLQGLPGPPGEKGEVGDVGSMGPPGAPGPRGPPGPSGSEGSPGPPGGVGQP
GAVGEKGEPGEAGDPGPPGAPGILGPKGEVGEKGDSGPPGAAGPPGKKGPPGEDGAKGNV
GPTGLPGDPGPPGDPGVSGLDGSPGERGDPGDVGGPGPPGASGEPGPPGPPGKRGPPGQM
GREGREGEKGAKGEPGPDGPIGRTGPLGAQGPPGRVGPEGLRGIPGPVGEPGLLGPPGQM
GPPGPMGPSGLPGLKGEAGLKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVRGPPGPKGEP
GPPGPIGPSGPPGPPGVAGPLGQKGSKGVPGSLGPRGDTGPPGPPGPPGLPAEIHGVRRR
RSVPGRGALEAPEGGLEEVLASLLSLSFELEQLRSPPGTAERPGLVCGELHRNHPHLPDG
EYWIDPNQGCARDALRVFCNFTAGGETCLYPDKKFETVKLASWSREKPGSWYSTFRRGKK
FSYVDADGSPVNVVQLTFLKLLSATARQSFTYSCQNAAAWLDEAAGDHGHSLRFLGTNGE
ELSFNQTAAATVTVPSDGCRLRKGQAKTLLEFSSSRAGFLPLWDVSATDFGQTNQKFGFE
LGPVCFSS
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atgggggcccgcggggaaccgggccagccgcgggccggcctctgcctgttcctggccttg
ctgcggctcctgccccggacacaggccgcagaccctgtggatgtgctgaaggtgctgggt
gtgcgggggggccaggctggggtccccgaggtgcccggcttctgcccccagagggctccg
gagggcgaccgggcattcagcgtgggcaaggccagcacactaggtgcccccacgtgggaa
ctctttccagatggacacttccctgagaacttctctgtgctgatcacttttcgggcccaa
ccagccaaccagtctgtccttctatccgtttatgacgagggtggcgcccggcagctggga
ctggtgctggggccaggtctgggtctcctaggtgggccctttagacccctccccgatcag
ttcaacctcatggacagcagatggcaccgtgtggcagtcagtgtggatggcagcacggtg
accctggtggccgactgtgaacctcagccccctgtgttgggccagggccctcgattcatc
agcacaggtggactcattgtgctggggacccaggatctcggggaggagagtttcgaggga
gacattcaggagctgctgataagcccagatcctcaggctgccttccaggcctgcgagcag
taccttcctggctgtgaccacctggccccgacagccaccggggttccccagggtgagcca
gaaacccctccccctcaaaggaagaggaagggaaaggggaagaaaaaagggcgtggtcgt
aaggggaagggcaggaagaagaagaacaaggagaccttgaccctggctccgtccctcggc
tccttggagaaccagacctccactgacatccccaagatggagacagcagctccaactctg
cctccaatgcccacgcccctggtcgtcaccaccaccgtgactattggccgcaatgtcact
accctggaggaagggctggaccctgaccgcggaactgaaccggggaccctggagactgag
ttagccagagaagaagaagaaggaggtggctccaccatgggccccgacttccgggcagca
gaacagtcatcacgagctcagttccagatcttttctggcgccagagagaagggagccaaa
ggagaacctgcagtgattgaagagggacagcagtttgagggacctccaggagccccagga
ccccggggggtggtcggcccctcaggcccccctggacccccaggattccttggggacccc
ggtccaccgggccccgccggcctcccaggcatccctggcatcgacggagtccggggcctg
ccgggcactgtgatcatgatgccgttccagtatgcaagcggctccctcaaaggaccccca
gtctccttccagcaggcacaggctcaggcaatactgcaacaggctcagctctctatgaca
ggcccccctggcccggtagggctcactgggcgcccaggccccgtgggcctccctgggtat
ccaggtctgaaaggagagatgggagaaatggggccacagggtccccgaggccttcaggga
cccgtcgggccccctggccgacagggcaagatgggacgctctggagcagatggggctcgg
ggcctcccaggagacacaggacctaagggtgataggggctttgatggccttccagggctg
cctggtgagaagggccaaaggggtgactttggccatacagggcaacctggtcccccggga
gaagatggtgagaggggagcagagggacctccagggcccactggccaggcgggggagccg
gggccccgaggactgctcggccctagaggctcccctggccccctgggaagcccgggtgca
gttggcatcgatggcgctccaggtgccaaaggaaacgtgggtcctccaggagaaccaggc
cccccaggacagcagggaaatcctgggtcccagggaatccctggcccccagggacccatt
ggcattcctggggagaagggtctccctggacacccaggaattccaggcctcacaggatct
gatggccctccgggtcatccaggccatgagggccccacaggagagaaaggagcccagggt
ccaccagggtcagcaggccctcggggatatcctggacctcggggtgtgaagggtacctct
ggcaacaggggccttcagggggagaaaggcgagaagggagaggatggcttcccaggcttc
aagggtgatggggggcttaaaggcgattggggaccccctgggcccccaggtccccgggga
gacgatggtcctgaaggacttaaaggacaaggagggctgcctggtgaggaagggccccca
ggctcagcaggggagaagggcaaacttggggtgccaggcctcccaggttacccaggacgt
ccaggccctaagggatctactggccttcctggtcccctgggaccattaggggagaaagga
aagcgggggaaggcagggcagcctggtctggagggagagcggggaccgcaaggctcccgg
ggagagagggggcaaccaggtgccacagggcaaccaggccccaagggtgatgtaggccag
gatggagcccctgggatccctggagaaaagggcctcccagggctacaagggccccctgga
ttccctgggccaaaggggccccctggccccccggggaaagatgggcgacctgggcaccct
ggacagagaggagacttgggctttcaaggtcaaacaggcccacctggtccagctggtgtc
gtgggtcctcagggaaagacaggagaagcaggacctctaggtgagcgggggcccccaggc
ccacctggacctcctggtgaacaaggtcttccaggactggagggcagagagggggccaag
ggggacctggggccaatgggaccccttgggaaggaagggccacctggacctatgggcttc
cctggccccaaaggagccccaggggaccctggacctatcggtttgaagggtgacagaggc
cccccgggccccactggggccaatggctcccctggggagcgtgggcctgtgggcccagca
ggaggcatcgggcttcctggtcaaagtggaagcccaggccctgttggctctacaggagag
aaggggtccccgggtgaacgtggtccccctggtcccactggccaagatgggatcccaggg
cccctggggcttcctgggccccctggagctgccggaccttctggggaggaagggtacaag
ggggaggtgggcacccctggtcacaaggggagcaaaggtgataagggggatgcgggccca
cctggaccagcagggatacggggtcctgcgggacacccaggttccccgggagcagacggg
gctcagggacgccggggacccccgggcctctttgggcagaaaggagatgatggagtgaga
ggcttcatgggggtgattggcccccctggccttcagggactgccaggccctcctggagaa
aaaggggaggtcggagacgtggggtccatgggtccccctggagctccaggtcctcggggt
ccccctggccctagtggatcagagggctccccagggccacccggaggagtcggtcagccg
ggtgctgtgggcgagaagggtgagccaggagaggctggagaccccgggcccccaggagcc
ccaggcatccttgggcccaagggagaagttggcgaaaagggggactcaggcccacctggg
gctgcaggacccccaggcaagaagggcccccctggggaggatggagccaaagggaacgtg
ggccccacagggctcccaggagatccaggaccccctggggaccctggagtttcgggtcta
gatggttctccaggggagagaggagatcctggtgatgttggaggacccggcccgcctgga
gcttctggggagcctggcccccctgggccccctggcaagaggggtcctcctggccaaatg
ggacgagaaggtagagaaggggagaaaggtgccaagggggagccaggtcctgacgggccc
atagggaggacaggtcctctgggggctcaagggccccctggacgtgttgggcctgagggt
cttcgggggatccctggccctgtgggtgaaccaggcctcctgggacctcctggacagatg
ggtcctcctggccccatggggccctccggcctcccagggctgaagggagaggctggcctc
aagggggaaaagggccacatcggattaatcggcctcatcggcccccctggggaggccggt
gagaaaggggatcaggggctgccaggcgtgcggggccctcctggccccaagggggagcct
ggtccccctggtcccattggcccttcagggccccctgggcccccaggtgtggcgggcccg
ctgggacagaaaggctcaaagggggtgccgggatcccttggcccccgtggtgacaccggc
cccccaggccccccaggccccccgggtctcccggcagagatacacggagtccggcgccgg
cgctccgtccccggcaggggagcgctggaggccccggagggcggcctggaggaggtactg
gcttctctcctgtccctgagctttgagctggagcagctgcggagccctcccggcaccgct
gagcgtccgggtcttgtgtgcggtgaactacaccgaaaccacccgcacctgccagatggg
gaatactggattgaccccaaccagggctgtgcgcgagacgcgctcagggttttctgcaac
ttcacggcaggaggagagacctgcctctaccccgacaaaaagtttgagaccgtgaaactg
gcttcctggtccagggaaaagccgggcagctggtatagcacattccgtcgagggaagaag
ttctcctatgtggacgctgatgggtccccggtgaacgtggtgcagctgaccttcctgaag
ttgctgagcgccacagcccgccagagctttacctactcctgccagaacgctgctgcctgg
ctggatgaagctgccggcgaccatggccactcccttcgcttccttggcaccaatggagag
gagctgtccttcaaccagacagcagcagccaccgtgactgtcccctctgatggctgccgg
ctccggaagggacaggcgaagaccctcctggagttcagctcttcccgagccgggtttctg
cccctgtgggacgtgtcggccactgactttggccagacgaaccagaagtttgggtttgaa
ctgggccctgtctgcttcagcagctga
DBGET
integrated database retrieval system
