Artibeus jamaicensis (Jamaican fruit-eating bat): 119037141
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Entry
119037141 CDS
T07223
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1 isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03020
RNA polymerase
ajm03420
Nucleotide excision repair
ajm05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119037141 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
119037141 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
119037141 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajm03021
]
119037141 (POLR2A)
03400 DNA repair and recombination proteins [BR:
ajm03400
]
119037141 (POLR2A)
Enzymes [BR:
ajm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119037141 (POLR2A)
Transcription machinery [BR:
ajm03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119037141 (POLR2A)
DNA repair and recombination proteins [BR:
ajm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119037141 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
119037141
NCBI-ProteinID:
XP_036985084
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGILSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggaggccccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggaattctgagtccggatgaactgaaacgaatgtctgtaacagagggtggt
atcaaataccctgagacaactgagggaggtcgccccaagcttgggggccttatggatccg
aggcagggggtgattgagcggactggccgttgccaaacatgcgcaggaaacatgacagag
tgtcctggccacttcggccacattgagctggccaaacctgtgtttcacgtgggcttcctg
gtgaagacaatgaaagttttgcgctgtgtctgcttcttctgctccaaattgcttgtggac
tctaacaacccaaagatcaaggacattttggccaagtccaaggggcagcccaagaagcgg
ctcacacatgtctatgacctctgcaagggcaaaaacatctgcgagggtggggaggagatg
gacaacaagtttggtgtggagcagcctgaaggcgatgaggatttgaccaaagaaaagggc
catggtggctgtgggcggtaccagcccaggatccggcgctcaggcctggagctttacgca
gagtggaagcatgtcaatgaggactctcaggagaagaagatcctgctgagtcctgagcga
gtgcacgagatctttaaacgcatctcagatgaggagtgttttgtgctgggcatggagccg
cgctatgcacgaccggagtggatgattgtcacagtgctgcctgttccgcccctctcggtg
cgacccgctgttgtgatgcaaggttctgcccgcaaccaggatgacctgactcacaaactg
gccgacatcgtgaagatcaacaatcagcttcggcgcaatgagcagaacggtgcggcagcc
catgtcattgcagaggatgtgaagctcctccagttccatgtggccaccatggtggacaat
gagctgcctggcttgcctcgtgccatgcagaagtctgggcgtcccctcaagtccctgaag
cagcggttaaagggcaaggaaggcagggtgcgagggaatctgatgggcaagcgagtggac
ttctcggcccgcactgtcatcactcccgaccccaacctctccattgaccaggttggcgtg
cctcgctccattgccgccaacatgacctttgcagagattgtcacccccttcaacattgac
agacttcaggaactagtgcgcaggggtaatagccagtacccaggggccaagtacatcatc
cgagacaacggcgatcgcattgacctgcgttttcaccccaagcccagtgaccttcaccta
cagactggctataaggtggagcggcacatgtgcgatggagacattgttatctttaaccgg
cagccaactttgcataaaatgtccatgatgggacatcgggtccgcatcctcccctggtct
acttttcgcttgaacctcagtgtgacaaccccgtacaatgctgactttgatggtgatgag
atgaacttgcacctgccacagtctctcgagacacgggcagagatccaggagcttgccatg
gtgccacgcatgattgtcactccccagagcaatcgccctgtcatgggcattgtgcaggac
acgctcactgcagtgcgcaaattcactaagagagatgtcttcctggagcggggtgaagtg
atgaacctgctgatgttcctgtccacgtgggacgggaaggtcccacagccagccatcctg
aagccccggcccctgtggacaggcaaacagatcttctcccttatcataccaggtcacatc
aactgtattcgtacccacagcacccatcccgatgatgaggacagtggcccttataagcac
atctcccctggggacactaaagtggtggtggagaacggggagctgatcatgggcattctg
tgtaagaagtctttgggcacatcagctggctctttggtccatatctcttacctagagatg
ggtcatgacatcactcgcctcttctattccaacattcagactgtcattaacaactggctc
ctcattgagggtcataccattggcattggggactccattgctgattctaagacttaccag
gacattcagaacactattaagaaggccaagcaggatgtaatagaggtcatcgagaaggcc
cataacaatgagctggagcccacccccgggaacactctgcggcagacatttgaaaaccag
gtgaaccgtattctcaacgatgcccgagacaagactggctcctctgctcagaaatctctg
tccgaatacaacaactttaagtctatggttgtgtctggagctaaaggttccaagatcaac
atctcccaggtcattgctgtcgttgggcagcagaatgtggaaggtaagcggatcccattt
gggttcaagcaccggactctgccacacttcatcaaggatgactatgggcctgagagccgt
ggctttgtggagaactcctacttggccggcctcacacccacagaattctttttccatgcc
atggggggccgcgaagggctcatcgacactgccgtcaagactgctgagacgggatatatc
cagcggcggctgatcaagtccatggagtccgtgatggtgaagtatgacgccactgtgcgg
aattccatcaaccaggtggtacagctgcgctatggtgaggacggcctggcaggcgagagt
gtggagttccagaacctggctacccttaagccttccaataaggcttttgagaagaagttc
cgctttgattataccaatgagagggccctgaggcgcactctgcaggaggatctggtgaag
gatgtgctgagcaacgcacacattcagaatgagctggagcgagaatttgaaaggatgcgt
gaggatcgcgaggtgctcagggtcatcttcccaactggggacagcaaggttgtcctcccc
tgtaacctgctgcgcatgatctggaatgctcagaaaatcttccatatcaaccctcgcctt
ccctccgacctgcaccccatcaaggtggtggagggagtcaaggaattgagcaagaagctg
gtgattgtgaatggggatgacccgctgagccggcaggctcaggagaatgccacactgctc
ttcaacattcaccttcgatccacactgtgttcccgtcgcatggctgaggaatttcggctc
agtggagaggcctttgactggctgcttggagagattgagtccaagttcaatcaagccatt
gcccatcctggggaaatggtgggcgctctggctgcacagtcccttggagaacccgcaaca
cagatgaccttgaataccttccattatgctggtgtgtctgccaagaatgtgacgctgggt
gtgccccgacttaaggagctcatcaacatttccaagaagccaaagaccccttcacttact
gtcttcttgctgggccagtctgctcgagatgctgagagagccaaggacattctgtgccgt
ctggaacatacaacattgaggaaggtgactgcaaacacagccatctactatgaccccaac
ccccagagcacggtggtggcagaggatcaggaatgggtgaatgtctactatgagatgcct
gactttgacgtggcccgaatctctccctggcttttgcgagtggaactggaccggaagcac
atgactgaccggaaactaaccatggagcagattgctgaaaagatcaatgctggttttggc
gatgatttgaattgcatctttaatgatgataatgcagaaaagctggtgctccgtatccgt
atcatgaacagtgatgaaaataagatgcaagaggaagaagaggtggtggacaagatggat
gatgatgttttcctgcgctgcatcgagtccaacatgctgacagacatgaccctgcagggt
atcgagcagatcagcaaggtgtacatgcacttgccacagacagacaataagaagaagatc
attatcacagaggatggggaattcaaggccctgcaagagtggattctggagactgatggc
gtgagcttgatgcgggtgctgagtgagaaggatgtggaccctgtgcgcaccacgtccaat
gatattgtggagatctttacggtattgggtattgaagccgtacggaaggccttggagcgg
gagctgtaccacgtcatctcttttgatggttcctatgttaattaccggcatttggctctc
ttatgtgataccatgacctgtcgtgggcacttgatggccatcacacgacatggagtcaac
cgccaggatactggacctctcatgaaatgctcctttgaggaaacggtggatgtgctcatg
gaagcagctgcccatggagagagcgaccccatgaagggggtatctgagaatatcatgctg
ggccagctagctccagctggcactggctgctttgacctcctacttgatgcagagaagtgc
aagtatggcatggagatccccaccaatatccccggcctgggtgctgctggacccaccggc
atgttcttcggctcagcacccagtcccatgggaggaatttctccagccatgacaccctgg
aatcagggtgcaaccccagcctacggcgcctggtcccccagtgttggaagtggaatgact
ccgggagcagctggcttctctcccagtgctgcttcggatgccagtggcttcagcccaggt
tattctcctgcctggtctcccacgcctggctccccaggctccccaggcccctcaagccca
tatatcccctcgccaggtggtgccatgtctcccagctactcaccaacatcgcctgcctat
gagccccgctcccctgggggctacacgccccagagtccctcttactcccccacttcaccc
tcctactcccctacctctccatcctattctccaaccagtcccaattatagtcccacgtca
cccagctattctcccacctctcccagctattctcccacctctcccagctattctcccacc
tctcccagttactctcccacctctcccagctactctccaacttccccaagctactcgccc
acatcacctagctactcaccgacttctcccagttactcgccaacatctcccagctactct
ccaacctctcccagttactccccaacctcacccagctattctcccacctctcccagctac
tccccaacatcacccagctattctcctacctctcccagctattcaccaacttctccaagt
tattcacccaccagccctaactactctccaaccagtcccaattataccccaacatcaccc
agctatagcccaacatcgcccagctactcacctactagtcccaactatacaccaacaagc
cctaactacagcccaacctctccaagctactctccaacatcacccagctactccccgacc
tcaccaagctattccccttcaagtccacggtatacaccacagtctccaacctacacccca
agttctcccagctatagtcccagctcgcccagctacagccctacctcaccaaagtatacc
ccaaccagcccttcatacagtcccagctcaccagagtacaccccaacctctcctaagtac
tcacctaccagcccgaaatactcacccacctcccccaagtactcacctaccagccctacc
tattcacccaccaccccaaaatactcaccaacgtctcctacttactcaccaacctctcca
gtctatactccaacctcccccaagtactcacctactagccccacttactcacccacctcc
cccaagtactcacccaccagccccacctattcacccacctcccccaaaggctctacctac
tcacccacttcccctggctactcacccaccagtcccacctatagtctcaccagcccagcc
atcagccctgatgacagtgatgaggagaactga
DBGET
integrated database retrieval system
