Artibeus jamaicensis (Jamaican fruit-eating bat): 119037854
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Entry
119037854 CDS
T07223
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
119037854 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ajm03036
]
119037854 (DICER1)
Chromosome and associated proteins [BR:
ajm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119037854 (DICER1)
microRNA pathway
RISC loading complex
119037854 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
ResIII
DEAD
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
119037854
NCBI-ProteinID:
XP_036986019
LinkDB
All DBs
Position
Unknown
AA seq
1922 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDRNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFTRHGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLELNASWTKEKWNQEFTKHQVLIMTCYVALIVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCESCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPYEIVVDCGPFMDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGEPD
VEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD
GTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI
EKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGV
GVRSLPVDFRYPNLDFGWKKSIDSRSFISIADSSPAENDNYCKPSTTVPENAAHPGANRA
SSPEDPDQMSVSCSAFFGEPSGRLPVEVSTDPTAINGLSYNGNLANGSYDLANSDFCQGN
QLKCYKQEIPVQPTTSYPIQNLYTYENQPTPSDECTLLSNKYLDGNANSSTSAGSPVAAA
VPGAPEAAAVLKGGTGPERSPPGYSPRTLGPNPGLILQALTLSNASDGFNLERLEMLGDS
FLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWL
PPGYVVNQDKSNTDKWEKDEMTKDCMLANGKLGEASEEDEEEEEGLTWRAPKEDADYEDD
FLEYDQEHIKFIDNMLMGSGAFVKKIPLSPFSTTDSAYEWKMPKKSSLGSMPFSSDFEDF
DYSSWDAMCYLDPSKAVEEDDFVVGFWSPSEENCGAEAGKQSISYDLHTEQCIADKSIAD
CVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAVCPAGENSNSQQKNLSGSR
AAASAASSRSSVFKDSEYGCLKIPPRCMFDHPDADKTLNHLISGFENFERKINYRFKNKA
YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN
NTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEED
IEVPKAMGDIFESLAGAIYMDSGMSLEMVWRVYYPMMRPLIEKFSANVPRSPVRELLEME
PETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKASQPQVPN
LS
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaatatcaggttgaactgctcgaggcagctctggaccgcaacacc
atcgtctgtttgaacactggctcagggaagacgttcatcgccgtgctactcacgaaagag
ctgtcctatcagatcaggggggacttcaccagacatgggaagaggacggtgttcctggtc
aactctgcaaaccaggttgctcagcaagtgtccgctgtcagaactcattctgatctcaag
gttggggagtattcaaacctagaactaaatgcatcgtggacaaaagagaaatggaaccaa
gagtttactaagcaccaggttctcattatgacttgctatgtcgccttgattgttttgaaa
aatggttacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgca
attctagaccacccctaccgagaaattatgaagctctgtgaaagttgcccatcgtgccct
cgtattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattagaa
gagaagattcagaaactggagaaaattcttaagagtaatgctgaaactgcaactgacttg
gtggtcttagacaggtatacttcacagccatatgagattgtggtagactgtggaccgttt
atggacaggagtgggctttacgaaagactgctgatggaattagaagaagcacttaatttt
atcaatgactgtaacatatctgtacattcaaaagaaagagattctactttaatttctaaa
cagatactgtcagactgtcgtgcggtgttggtagttctgggaccctggtgtgcagataaa
gtggctggaatgatggtaagagaactgcagaaatacatcaaacatgagcaagaggagctg
cacaggaagtttctattgtttacagacactttcctacggaaaatacacgcactgtgtgaa
gagcacttctcacctgcctcacttgacctgaaatttgtaactcctaaagtgatcaaactg
ctcgaaatcctacgcaaatacaaaccatatgagcggcagcagtttgagagcgtggagtgg
tacaataataggaaccaggacaattatgtgtcttggagtgattctgaggatgatgatgag
gatgaagaaattgaagaaaaggagaagccagagacaaattttccttctccatttaccaat
attttatgtggaattatttttgtggagagaagatacacagcagttgtcttaaacagattg
ataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaattttataact
ggacatggcatcggaaagaaccagcctcgtaacaaacagatggaagcagaattcagaaaa
caggaagaggtactcagaaaatttcgggctcatgagaccaacctgcttattgcaacaagt
atcgtggaagagggcgtcgatataccaaagtgcaacttggtggtccgtttcgatttgccc
acggagtatcgctcctatgtccagtccaagggaagagccagggcaccgatctccaattac
ataatgttagcagacacggacaaaataaaaagttttgaagaagatctgaaaacatacaaa
gctattgaaaagatcttgagaaacaaatgttccaagtcagtggacaccggcgagcctgac
gtggagcccgtcgtggacgacgacgacgtgttcccaccgtacgtgctgaggcccgacgat
gggggtccgcgggtcacgatcaacacggccatcgggcacatcaatagatactgtgcgaga
ctgccaagtgacccgtttactcacctagctcctaaatgtaggacccgagagttgcctgat
ggtaccttctactcaacgctttatctgccaatcaactcacctctccgagcctccattgtt
ggtccaccaatgagttgtatacgattggctgaaagagttgtagctcttatttgctgtgaa
aaactgcacaaaattggtgaactggatgaccatttgatgcctgttgggaaagaaactgtt
aaatacgaagaagagcttgacttacacgatgaagaagagaccagtgtcccgggccggcca
ggttccacaaaacgaagacagtgctacccgaaagcaattccagaatgtctgagggacagc
taccccaagcccgatcagccctgttacctgtacgtgataggaatggtcctcaccacacca
ttacctgacgaactcaacttccggaggcggaagctctacccccccgaggacaccacgaga
tgctttggaatactgacagccaaacccatacctcagattccgcactttcctgtgtacacc
cgctctggagaggtcaccatatccatcgagctgaagaagtctggtttcacattgtctctt
caaatgctcgagttgatcacaagactccaccagtatatattctcacatattcttcgcctc
gaaaagcctgcactagaatttaaacccacggacgccgattcggcgtactgtgttctacct
ctgaacgtcgttaacgactccagcactttggacattgacttcaaattcatggaagatatt
gagaaatccgaagctcgcataggcattcccagtacaaaatattcaaaagaaacacccttt
gtctttaaattggaagattaccaggatgcagttatcattccaaggtatcgaaattttgat
cagcctcatcgattttatgtagctgatgtgtacactgatcttaccccactgagtaaattt
ccttcccccgagtatgaaactttcgcagagtattacaaaacaaaatacaaccttgacctg
accaatctcaaccagcccctgctggacgtggaccacacctcttcaagacttaacctgctg
acacctcgccacttgaatcagaaagggaaagccctccctctgagcagtgctgagaagagg
aaagccaagtgggagagtctgcagaacaaacagatcctggttccggaactctgtgctata
caccccatcccagcatcactgtggagaaaagcagtctgcctccccagcatactctatcgc
cttcactgccttctgaccgcggaggagctgcgagcccagacggccagcgacgctggcgtg
ggcgtccggtcgcttcctgtggattttcgataccctaacttagacttcgggtggaaaaaa
tccatcgacagcaggtctttcatctcaatcgctgactcctctccagctgaaaacgataat
tactgcaagcccagcacaaccgtccctgaaaatgctgcgcatccaggtgctaatagagcc
tcctctccagaagatcccgaccaaatgtctgtgagctgcagcgcgttcttcggtgagcca
tccggtcgactcccagttgaagtttcaacagatccgacagcaattaatggtctttcttac
aacggaaatcttgccaatggcagttatgacttagctaacagcgacttttgccaaggaaat
cagctgaaatgctacaagcaggaaatacctgtacaaccaactacctcatatcccattcaa
aatttatacacttacgagaaccagcccacgcccagcgatgaatgtactctactgagtaac
aaataccttgatggaaacgctaactcatctacctcagctggcagtcccgtggcggccgca
gtgcccggtgctccggaagctgccgcggtcctcaaaggcgggacaggccctgagcggagt
cctcccgggtactccccgaggactctcggcccgaaccccggactcattcttcaggctctg
accctttccaatgccagcgatgggttcaacctggagcggctggagatgctcggcgactcc
tttttaaagcacgccatcaccacctacctgttctgcacttaccccgacgcgcacgagggc
cgcctttcctacatgagaagcaagaaggtcagcaactgtaatctctatcggctcggaaaa
aagaagggactgcccagccgcatggtggtgtcgatatttgatccccctgtgaactggctt
cctcctggttatgtagtaaatcaagacaaaagtaacacagataaatgggaaaaagatgaa
atgacaaaggactgcatgctggctaacggcaagctgggcgaggcctctgaggaagacgag
gaggaggaggagggcctgacgtggagggctcccaaggaggacgccgattacgaagatgac
ttcctggagtacgatcaggagcacatcaagttcatagataacatgttaatggggtctgga
gcttttgtaaagaaaattcctctttctcctttttcaaccactgattctgcctatgaatgg
aaaatgcccaaaaaatcctccttaggcagtatgccgttttcatccgactttgaggatttt
gactatagctcttgggatgcgatgtgctacctggaccccagcaaggccgtggaggaggac
gacttcgtggtggggttctggagcccatcggaggagaactgcggcgccgaggcggggaag
cagtccatctcctatgacctgcacaccgagcagtgcatcgctgacaagagcatagccgac
tgcgtggaagccctgctgggctgctacttaaccagctgcggcgagagggctgcgcagctc
ttcctctgctccttggggctgaaggtgctcccggtaattaaaaggactgatcgggaaaag
gccgtgtgccccgccggggagaattccaacagccaacaaaagaacctttcaggaagccgt
gccgctgcctctgcggccagctcccgctcctctgtgtttaaagactcggagtatggttgt
ttgaagattccgccgaggtgcatgtttgatcatccggatgcagataaaacactgaatcac
ctgatatccggttttgaaaattttgaaaggaaaatcaactacagattcaagaataaggct
taccttctacaggctttcacacacgcctcctaccactacaataccattactgattgttac
cagcgcttagagttcctgggagatgcgattttggactacctcataaccaagcacctttac
gaagacccgcggcagcactccccgggggtcctgaccgacctgcgctctgccctggtcaac
aacaccatcttcgcgtccttggccgtgaagtacgactaccacaagtacttcaaagccgtg
tccccggagctcttccacgtgatcgatgacttcgtgcagttccagctcgagaagaacgag
atgcaggggatggactccgagcttaggagatctgaggaggacgaagagaaggaagaggac
attgaagtcccaaaggccatgggagacatttttgagtcactggctggcgccatctacatg
gacagcgggatgtcactggagatggtgtggcgggtgtactaccctatgatgcggccacta
atagaaaaattttctgcaaatgtgccccgttcccctgtgcgagaattgcttgaaatggaa
ccagaaaccgccaaatttagcccggccgagagaacttacgacggcaaggtcagagtcact
gtggaagtggtcggcaaggggaagtttaaaggcgttggccgcagttacaggatcgccaag
tccgcggcggcgaggagggccctgcgaagcctcaaagctagtcaacctcaggttcccaac
ctcagctga
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integrated database retrieval system
