Artibeus jamaicensis (Jamaican fruit-eating bat): 119037985
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Entry
119037985 CDS
T07223
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03082
ATP-dependent chromatin remodeling
ajm04714
Thermogenesis
ajm05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119037985 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
119037985 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
119037985 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajm03021
]
119037985 (SMARCC1)
03036 Chromosome and associated proteins [BR:
ajm03036
]
119037985 (SMARCC1)
Transcription machinery [BR:
ajm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119037985 (SMARCC1)
Chromosome and associated proteins [BR:
ajm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119037985 (SMARCC1)
PBAF complex
119037985 (SMARCC1)
GBAF(ncBAF) complex
119037985 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
BRCT_2
Chromo
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
119037985
NCBI-ProteinID:
XP_036986303
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MAAAAGGGGPGTAAGAAGAGGAAVAVGLAVYRRKEGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDTFGKHVANPAFTKLPAKCFMDFKAGGTLCH
VLGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLMPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYPASQEDEEWLRPVMRRDKQVLVHWGLYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
PTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQSSIYGKRRSQKE
EDEQEDLTKDMEDPTPVPNVEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG
KEDEDSGKGDQSRPSDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLSFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
MEMDTDGQQPEKAENKGDSEPVEGDKAQDGDNEKTSEKEQDSEVSEDTKSEEKETEENKE
LTDPYKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QHGQNPPQGHQHSGAPGLAPLGATGHPGMMPHQQPPPYPLVQHQMPPPQPGQMPGPGSMM
PGQPMPGRMIPTVTANIHPPGGGPPPPGMPPMPGNILGPRVTLTAPNGMYPPPPQQQPPP
PADGVPPPPTSGPPASAAP
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcagcgggcggcggcggtcctgggacggcggcgggcgccgcgggtgcggga
ggcgcggcggtggctgtaggcttggcggtttatcggcggaaggaagggggcccggccagc
aagttttgggagagcccggagaccgtatcccagctggattctgtgcgggtctggcttggc
aagcactacaagaagtatgtccatgcggacgcgcccaccaataaaacgctggcggggctg
gtggtgcagcttctccagttccaggaagatacctttgggaagcatgtcgccaacccggcc
ttcaccaagctccctgcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcat
gtccttggggctgcttacaagtataaaaatgaacagggatggcggaggtttgatctacag
aacccatcccgaatggatcgcaatgttgagatgtttatgaatattgaaaaaacattggtg
cagagcaattgtctgaccagacccaacatctacctcatgccagacattgatctgaagctg
gctaacaaattgaaagatatcatcaaacgacatcaggggacatttaccgacgagaagtca
aaagcttcccaccacatttatccgtatcctgcctcccaagaagatgaagaatggctgagg
ccggtgatgaggagagacaagcaggtgctggtgcactgggggctctacccggacagctac
gatacttgggtccatagtaatgatgttgatgcggaaattgaagatccaccaattccagaa
aagccatggaaggttcatgccaaatggattttggacacggatgttttcaatgaatggatg
aatgaggaggattacgaggtggatgagaacaggaagcctgtgagtttccggcagcgcatt
ccaacaaagaatgaagagccagtcagaagtccagagagaagagatagaaaagcatcagct
aatgctcgaaagaggaaacattcgccttcccctccacctcccacacccacagaatcgcgg
aagaagagtgggaagaaaggccaatctagtatttatgggaagcgcaggagccagaaagag
gaagacgagcaagaagatcttaccaaggatatggaagacccgacgccggtgcccaacgtg
gaggaagtggtgcttccaaaaaacgtaaatccaaagaaagatagcgaaaatacacctgtt
aaaggaggaactgtagccgatctagatgaacaggatgaagagacagtgaccacaggaggg
aaggaagacgaggactccggcaaaggcgatcagagccggccctccgaccctggtgaagac
aatgtgacggagcagaccaatcacatcatcattcccagctacgcctcgtggtttgactac
aactgtattcacgtgattgaacggcgtgctcttcctgagtttttcaatggaaaaaacaaa
tccaagactccagagatatacttggcatatcgaaattttatgattgacacatatcgcctg
aacccccaagaatatttgaccagcaccgcttgccggaggaacttgactggagacgtgtgc
gctgtgatgagagttcatgcctttttggagcagtgggggcttgttaattaccaagttgat
ccagaaagtcgacctatggccatgggacctcctccgactcctcatttcaatgtattggct
gacaccccctctgggcttgtgcctctacaccttcgatctcctcaggtccctgctgctcag
cagatgttaagttttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggt
ctccgtactgacatttattccaagaaaaccttagcaaagagcaaaggtgccagtgctgga
agagagtggactgagcaggagaccctgctcctcctggaggccctggagatgtacaaggac
gactggaacaaagtgtccgagcacgttgggagccgtacgcaggacgaatgcatcctccac
tttttgaggcttcccatcgaggacccctacctcgagaattcagatgcttccctgggaccc
ctggcgtaccagcctgtccccttcagtcagtcaggaaacccggtcatgagcaccgtggcc
tttctggcatctgtggtggaccctcgggtggcgtctgccgcagcaaaggcggctctggag
gagttttctcgggtccgggaggaggtacccctggaattggtggaagctcatgtcaagaaa
gtacaagaagcagctcgagcctctgggaaggtggatccgacctacggcctggagagcagc
tgcatcgcgggcacggggcccgatgagccagagaagcttgaaggagctgaagaagagaaa
atggaaatggatacggatggtcagcagcctgaaaaggcagaaaacaaaggggacagtgaa
ccagttgaaggcgataaagcacaagacggcgacaatgaaaaaacgagcgagaaggaacag
gatagtgaagttagtgaggacaccaaatcagaggaaaaggagactgaagagaacaaggaa
ctcactgatccttacaaagaaagagaaagtgataccgggaagaagaaagtagaacatgaa
atttctgaaggaaacgtagccacagccgcagcagctgctctggcctcagctgcaacgaaa
gccaagcacctagctgccgtggaagagcgaaagatcaagtctctggtggctctcctggtt
gagacccagatgaagaaactagagatcaaactgcggcatttcgaggagctggagacgatc
atggaccgagagaaagaggcgttggagcaacagaggcagcagctgcttactgaacgccag
aacttccacatggagcagctgaagtacgcggaactgcgagcccgccagcaaatggagcag
cagcatgggcagaaccctccgcaggggcaccagcactcgggagcacctggcctagcgcca
ctgggggccacagggcacccgggcatgatgcctcaccagcagccgccgccctaccctctg
gtgcagcaccagatgccgccgccccagccaggtcagatgccaggtccgggttccatgatg
ccagggcagcccatgccaggccgcatgattcccaccgttacagccaacatccaccccccc
gggggtggccctccccctcctggtatgccgccaatgccgggaaacatcttgggaccccgg
gtaaccctcacggcacctaacggcatgtatccccctccgccacagcagcagccgccacca
ccggcagatggagtccctccacctcctacttcaggcccacctgcctccgcagcgccctag
DBGET
integrated database retrieval system
