Artibeus jamaicensis (Jamaican fruit-eating bat): 119038873
Help
Entry
119038873 CDS
T07223
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03082
ATP-dependent chromatin remodeling
ajm04714
Thermogenesis
ajm05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119038873 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
119038873 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
119038873 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajm03021
]
119038873 (SMARCA4)
03036 Chromosome and associated proteins [BR:
ajm03036
]
119038873 (SMARCA4)
Transcription machinery [BR:
ajm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119038873 (SMARCA4)
Chromosome and associated proteins [BR:
ajm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119038873 (SMARCA4)
Chromatin remodeling factors
BAF complex
119038873 (SMARCA4)
PBAF complex
119038873 (SMARCA4)
GBAF(ncBAF) complex
119038873 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Htt_C-HEAT
Motif
Other DBs
NCBI-GeneID:
119038873
NCBI-ProteinID:
XP_036987320
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPSQG
PGGYPQDNMHQMHKPMESMHEKGMSEDPRYNQMKGMGMRTGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQVPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDEESKKQ
KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGS
RAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggcggaactcctcggccaggcccttccccgggccca
ggcccctccccgggagccatgctgggccccagccctggtccctcccctggctctgcccac
agcatgatggggcccagtccgggccctccttcagcaggacaccctatcccaagccagggg
cctggagggtaccctcaggacaacatgcaccagatgcacaagccaatggagtccatgcat
gagaagggcatgtccgaagaccctcgctacaaccagatgaagggcatggggatgcggaca
gggggccacgcagggatggggcctccgccgagccccatggaccagcactctcaaggttac
ccctcaccactgggtggctctgagcatgcttctagtccagttccagccagtggcccatcc
tcgggcccacagatgtcgtctgggccaggaggggccccactggatggtgctgacccccag
gctttgggacagcagaaccggggcccgacaccgtttaaccagaaccaactgcaccagctc
agagctcagatcatggcctataagatgctggccagggggcagcccctgcccgaccacctg
cagatggctgtgcagggcaagcgaccaatgcctgggatgcaacagcaggtgccaacacta
cctccaccctctgtgtctgcaacaggacccggccctggccctgggcctggccctgggcct
ggcccaggaccagcacctccgaattacagcaggccccacggtatgggagggcccaacatg
ccccccccaggaccctcaggtgtgccccccgggatgccaggccaaccccctggagggcct
cccaagccctggcctgaaggacccatggcaaatgctgctgcccccacgagcacacctcag
aagctgatcccccctcagcccaccggccgtccctcacccgcaccccccgctgtcccacct
gccgcctctcccgtgatgccaccccaaacacagtcgccgggtcaaccagcccagcctgca
ccaatggtaccactgcaccagaagcaaagccgcatcacccccatccagaaaccccggggc
ctggaccctgtggagattctacaggagcgggagtacaggctgcaggctcgcatcgctcac
cgaattcaggaacttgaaaacctacccgggtcgctggccggggatttacgaaccaaagca
acgattgagctcaaggccctcaggctgctgaacttccagaggcagctgcggcaggaagtg
gtggtgtgtatgaggagggacacggcccttgagacggccctcaatgccaaggcttacaaa
cgtagcaagcggcagtccctgcgcgaggcccgaatcaccgagaagctggagaagcagcag
aagattgagcaggagcgcaagcgccggcagaagcatcaggaatacctcaacagcattctt
cagcatgccaaggatttcaaagaatatcacagatccgtcacaggcaaaattcagaaactc
acaaaggcagtggccacgtaccatgccaacacagaacgggaacagaagaaggaaaatgag
agaatcgagaaggagaggatgcggaggctcatggcggaagatgaggaagggtaccgcaag
ctcatcgaccagaagaaggacaagcgtttggcctacctcttacagcagacagatgagtat
gtggctaacctcacggagcttgtacggcagcacaaggctgcccaggtcgccaaggagaaa
aagaagaagaagaaaaagaagaaggcagaaaacgcagaaggacagacacctgcaatagga
cctgatggcgagcctctggatgagaccagccaaatgagcgacctgcctgtgaaagtgatc
catgtggagagcgggaagatcctcacaggcacggacgcccccaaagcggggcagctggag
gcttggcttgagatgaaccccgggtatgaagtagctccaaggtctgatagtgaagaaagt
ggctcagaagaagaggaggaggaagaggaggaggaacagccacagccagcgcagcctccc
actctgcctgtagaggagaaaaagaagattccagatccagacagcgatgacgtctctgag
gtggacgcccggcacatcattgagaatgccaagcaagatgttgatgatgagtatggtgtg
tcccaggccctcgctcgtggcctgcagtcctattatgctgtggcccatgctgtcaccgag
agggtggataagcagtcagcgcttatggtcaatggtgtcctcaaacagtaccagatcaag
ggcttggagtggctggtgtccctgtacaacaacaacctgaatggcatcctggctgacgag
atgggcctgggaaagaccatccagaccatcgcgctcatcacgtacctcatggagcacaag
cgcatcaacgggcccttcctcatcatcgtacctctctcgacactgtcaaactgggcatat
gaatttgacaagtgggccccctctgtggtgaaggtgtcctacaagggctctccagcagcc
aggcgggcttttgttccgcagctccggagtggcaagttcaatgtcttgctaacgacatat
gagtacatcattaaagacaagcacatccttgcgaagatccggtggaagtacatgatcgtg
gacgaaggccaccgcatgaagaaccaccactgcaagctgacgcaggtcctcaacacacac
tacgtggccccccgccgcctgctgctgacaggcacgccactgcagaacaagctccctgag
ctctgggctctgctcaactttcttctgcccaccatcttcaagagctgtagcacctttgag
cagtggttcaacgcaccttttgccatgactggagaaaaggtggacctgaacgaggaggag
accattctcatcattcggcgtctccacaaagtgctacggcccttcctgctccggcggctc
aagaaagaggtcgaggctcagttgcctgaaaaggtggagtacgtcatcaagtgcgacatg
tctgccctgcagcgtgtgctgtaccggcacatgcaggccaagggtgtgctgctgactgat
ggctctgagaaggacaagaagggcaagggcggcaccaaaaccctgatgaacaccatcatg
cagctgaggaagatctgtaaccacccgtacatgtttcagcacatcgaggagtccttttct
gagcatctggggtttaccggcggcattgtccaagggctggacctataccgagcctcaggg
aaatttgagctcctcgatagaattttgcccaaacttcgtgccaccaaccataaagtgctg
ctcttctgtcagatgacctctctcatgacaatcatggaagattactttgcgtatcgtggc
tttaaatacctcaggctcgatggaaccacaaaagcagaggatcggggcatgctgctgaaa
accttcaatgagcctggctccgagtacttcatcttcctgcttagcacccgggctgggggg
ctcggcctgaacctccagtcggctgacactgtgatcatttttgacagtgattggaaccct
caccaggatctgcaagcacaggaccgagcccaccgcatcgggcagcagaatgaggtgcgc
gtgctccgcctctgcacggtcaacagtgtggaggagaagattctggccgcggccaagtac
aagctcaacgttgaccagaaggtgatccaggctggcatgtttgaccagaagtcctccagc
cacgagaggcgcgccttcctgcaagccatcctggagcacgaggagcaggatgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaagaagacgaagtgcctgatgacgag
actgtgaatcagatgattgctcggcacgaagaggagtttgacctcttcatgcgcatggac
ctggaccgcaggcgtgaggaagcccgcaaccccaagcggaagcctcgcctgatggaggag
gatgagctcccctcgtggatcatcaaggatgacgctgaagtggagcggctgacctgtgag
gaggaagaggagaagatgtttggccgtggctcccgccaccgcaaggaggttgactacagc
gactcgttgactgagaagcagtggctcaaggccatcgaggagggcacgctggaggagatc
gaagaggaggtccggcagaagaaatcatcgcggaaacgcaagcgggacagtgacgccggc
tcctccaccccgaccaccagtacccgcagccgtgacaaagatgaggagagcaagaagcaa
aagaagcgcgggcggccacctgccgagaagctctcccccaacccaccaaacctcaccaag
aagatgaagaagattgtggatgccgtgatcaagtataaggacagtagtagcggacggcag
ctcagcgaggtgttcatccagctgccctcccgcaaagagctgcctgagtactacgagctc
atccgcaaacctgtggacttcaagaagattaaggagcgcatccgcaaccacaagtaccgc
agcctcaacgacttggagaaggacgtcatgctgctgtgccagaacgcgcagaccttcaac
ctggaaggctccctgatctacgaagactccattgttctgcagtccgttttcaccagcgtg
cggcagaaaatagagaaagaggatgacagtgaaggcgaggagagtgaggaggaagaagaa
ggcgaggaggaaggctcagagtctgagtcccgctcagtcaaagtgaagatcaagctgggc
cggaaggagaaggcacaggatcggctgaaggggggccggcggcggccaagccgcgggtcc
cgggccaagccagtggtgagtgacgatgacagtgaggaggagcaggaagaggatcgctca
ggaagtggcagcgaagaagactga
DBGET
integrated database retrieval system
