Artibeus jamaicensis (Jamaican fruit-eating bat): 119039759
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Entry
119039759 CDS
T07223
Symbol
SMG5
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5 isoform X1
KO
K11125
protein SMG5
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119039759 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajm03019
]
119039759 (SMG5)
03032 DNA replication proteins [BR:
ajm03032
]
119039759 (SMG5)
Messenger RNA biogenesis [BR:
ajm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119039759 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
119039759 (SMG5)
DNA replication proteins [BR:
ajm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
119039759 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
FAD_binding_7
Motif
Other DBs
NCBI-GeneID:
119039759
NCBI-ProteinID:
XP_036988475
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MSQGPATGESIEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLR
ELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIG
FYQHLLLYIQSHYQLELQCCIDWTHVTDPLIDPLPDQDMDIARQRWRFCSCCRMEAFSGC
KKPVSASGKEMDWAQMACHRCLVYLGDLSRYQNELAGVDTELLAERFYYQALSVAPQIGM
PFNQLGTLAGSRYYNVEAMYCYLRCIQSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRK
LSPSKKRCKDIKRLLVNFMYLQSLLQPQSSSVDSELTSLCQSVLEDFNLCLFYLPSSPNL
SLASEDEEEYESGYAFLPDLLIFQMVIICLMGVHNLKRAGSKQYSAAIAFTLALFSHLIN
HVNIRLQAELEEGENPVPAFQSDGTDEPESKEPLEKEEPPPVEPQVGEVRKSRKFSRLSC
LRRRRRHLPKVGDDSDLSEGFESDSSRDSARASEGSDSGSDKSLECGGTAFDAETDSEMN
SQESRSDLEDMEDEEGTRSPALEPPRTRSEAPESLNGPLGPSEASLASNLQAMSTQMFQT
KRCFRLAPTFSNLLLHPTTEPHGLASCRPCINGDVDKPSEPASEEGSESEGSESSGHSCR
NERSIQEKLQVLMAEGLLPTVKVFLDWLRTNPDLIVVCAQSSQSLWNRLSVLLNLLPAAG
ELQESGLALSPEVHVLLESCELPDLPSTLLLPEDMALRSLPPLRAAHRRFNFDVDRPLLS
TLEESVVRICCIRSFGHFVARLQGSILQFSPEVGIFVSTAQSEQESLLQQAQAQFRMAQE
EARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQHLPIIRQLATS
GRFIVIIPRTVIDGLDLLKKEHPGARDGIRYLEAEFKKGNRYIRCQKEVGKSFERHKLKR
QDADAWTLYKILDSCKQLTLAQGAGEEDPSGMVTIITGLPLDNPSVLSGPMQAALQAAAH
ASVDIKNVLDFYRQWKEIG
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaggccccgccacaggggagagcatcgaacccgaagcaaaagtcctccacact
aagcggctttaccgggctgtggtggaggctgtgcatcgacttgacctcatcctttgcaac
aaaaccgcttatcaagaagtgttcaaaccagagaacattagcttgaggaacaagctgcgt
gaactctgtgtcaagcttatgttcttgcacccagtggactatggaaggaaggctgaggag
ctgctatggagaaaggtatactacgaagtcatccagcttatcaagactaacaaaaagcat
atccacagccggagcaccttggagtgtgcctacaggacacacctggttgctggtattggc
ttctaccagcatctccttctctacatccagtcccactaccaacttgaactgcagtgctgc
atcgactggacccatgtcaccgaccccctcatagaccccctgcctgaccaggacatggac
attgcgcgccagaggtggaggttttgttcgtgctgccgcatggaagcattttctggatgc
aagaaaccagtatctgcctcagggaaggagatggattgggcacagatggcatgccatcga
tgtctggtgtacctgggggatttgtcacgatatcagaatgaattagctggtgtagacacc
gagctgctagctgagaggttttactaccaagccctgtcagtagctccccagattggaatg
cccttcaaccagctgggtacactcgcaggcagcaggtactataacgtggaagccatgtat
tgctacctgcgctgcatccagtcagaagtgtcctttgagggggcctatgggaacctcaag
aggctgtatgacaaggcggccaaaatgtaccaccagctgaagaagtgtgagactcggaaa
ctgtctcccagcaagaaacgatgtaaagacattaagaggttgctggtaaactttatgtat
ctgcaaagcctcctgcagcctcaaagcagctctgtggactcagagctgacatcactttgc
cagtccgtcctggaggacttcaacctctgtctcttctacctgccctcctcacccaacctc
agcctggccagtgaggatgaggaggagtatgagagtggatatgctttcctcccggatctt
ctcatctttcaaatggtcatcatctgccttatgggtgtgcacaacttgaagagagcagga
tccaagcagtacagtgcagccattgccttcaccctggccctgttctcccacctcatcaac
cacgtcaacataaggctgcaggctgagctggaagagggggagaatcccgtcccggcattc
cagagcgatggcacagatgagccagaatccaaggaacccttggagaaggaggagcctcct
cctgtagaacctcaggtgggtgaggtccgaaagagccggaagttctcccgcctctcctgc
ctccgccgccgccgtcgccacctgcctaaagtcggtgatgacagtgacctgagtgaaggc
tttgaatctgactcgagccgagactcagcccgggccagtgagggctcggacagtggctct
gacaagagccttgaatgtgggggaacagcctttgatgctgagacagactcagaaatgaac
agccaagaatcccgatcagacctggaagacatggaggatgaggaggggacacggtctcca
gccctggaaccccctcggaccaggtcagaggctcccgagtccctcaatggccctctgggc
cccagtgaggctagccttgccagcaatctacaagccatgtccacccagatgttccagacc
aagcgctgcttccgactggcccccaccttcagcaacctgctcctccaccccaccactgaa
cctcacggcttggccagctgtaggccctgtatcaatggagatgtggataagccctcagag
ccagcctctgaggagggttctgagtcggagggcagtgagtccagtgggcactcctgtcgg
aatgagcgcagcatccaggagaagctgcaagtcctgatggctgaaggcctgcttcccaca
gtgaaggtcttcctggactggctgcggaccaaccccgacctcatcgtcgtgtgtgcacag
agctctcagagtctatggaaccgcttgtccgtgttgctgaatctgttgccagctgccggt
gaactccaagagtctggcttggccttgtctcccgaggtccatgttcttcttgaaagttgt
gaactgcctgacctcccctctaccctgctgctcccagaggacatggcccttcgcagcctg
cctcccctacgggctgcccacagacgctttaactttgatgtggaccggcccctgctcagc
accttagaggagtctgttgtgcgaatctgctgcatccgcagctttggccactttgtcgcc
cgcctgcaaggcagcatcctgcagttcagcccggaagttggcatctttgttagtactgcc
cagtccgagcaagagagcctgctgcagcaggcccaggcccagttccgaatggcacaggaa
gaagctcggcggaacaggctcatgagagacatggcacagctgcgacttcagcttgaggtc
tctcagctggaagggagcctacagcagcccaaggcccaatcagcaatgtcaccctacctc
gtccctgacacccaggccctttgccaacacctccccatcatccgccagctggccaccagt
ggccgcttcattgtcatcatcccaaggacagtgatcgatggcctggatttgctgaaaaag
gaacacccaggggcccgggatgggattcgatacctagaggcagaatttaaaaaaggaaac
aggtacattcgctgccagaaagaggtagggaagagctttgagcgacataagctgaagaga
caggatgcagatgcctggactctctataaaatcctggacagctgcaaacagctaactctg
gcccagggggcaggtgaggaggacccaagtggcatggtgaccatcatcacaggccttcca
ctggacaaccccagcgtgctctcaggccctatgcaggcagccctgcaggccgctgcacat
gccagtgtggacatcaagaatgttctggacttctacaggcagtggaaggaaattggttga
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integrated database retrieval system
