Artibeus jamaicensis (Jamaican fruit-eating bat): 119040330
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Entry
119040330 CDS
T07223
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X4
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03082
ATP-dependent chromatin remodeling
ajm04714
Thermogenesis
ajm05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119040330 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
119040330 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
119040330 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajm03021
]
119040330 (SMARCC2)
03036 Chromosome and associated proteins [BR:
ajm03036
]
119040330 (SMARCC2)
Transcription machinery [BR:
ajm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119040330 (SMARCC2)
Chromosome and associated proteins [BR:
ajm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119040330 (SMARCC2)
PBAF complex
119040330 (SMARCC2)
GBAF(ncBAF) complex
119040330 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
119040330
NCBI-ProteinID:
XP_036989175
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKAPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEEKKEPKEPREGVGVVEEEAKEKTSEAPKKDEEKGKEGDSEKE
SEKSDGDPVVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPTVHGLAMA
PASVAPAPPGSGAPPGSLGPSEQIGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQT
PPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPFGSLADSISINLPPPPNLH
GHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAV
QGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacaca
gtgacccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtatatacaa
gctgaaccacccaccaacaagtccctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaacgcgccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgacttccagaatccatcacgcatggaccgcaat
gtggaaatgttcatgaccattgagaagtccttggttcagaataattgcctgtctcgacca
aacatttttctgtgcccagaaattgaacccaaactactaggcaaactaaaggacattatc
aagagacaccagggaacggtcactgaagataagaacaatgcttcccatgtggtgtatcct
gtccccgggaacctggaagaagaggaatgggtacggccagtcatgaagagggacaagcag
gttcttctgcactggggctattaccccgacagttacgacacatggatcccagccagtgaa
attgaagcttctgtggaagatgctccaactcctgagaaacccaggaaggttcatgcaaag
tggattctggacacagacaccttcaatgaatggatgaatgaggaagactacgaagtaaat
gacgacaaagcccctgtctctcgccgaaagaagatttcagccaagacgttgacagatgag
gtgaacagcccagattcagatcgacgagacaaaaagggggggaactataagaagaggaag
cgctccccctctccttcaccaaccccagaagctaagaagaaaaatgctaaaaaaggtccc
tcaacaccttacaccaagtccaagcgtggccacagggaagaggagcaagaagacctaaca
aaggacatggatgagccctcaccggtccccaacgtagaagaggtgacattacccaaaaca
gtcaacactaagaaggactcggagtcagccccagtcaaaggaggcaccatgacggacttg
gatgagcaggaggatgagagcatggagaccacgggcaaggatgaggatgagaacagtacg
gggaacaaaggggagcagaccaagaacccagacctgcacgaggacaatgtgacagagcag
acccatcacatcatcattcccagctacgcagcctggtttgactacaatagcgttcacgcc
attgagcggagggctctcccagagttcttcaacggcaagaacaagtccaagactccagaa
atctacctggcctatcgaaacttcatgattgacacctaccgcctgaacccccaagagtat
ctcacctccacagcctgccgcaggaacctggcaggtgacgtctgcgctatcatgagggtc
catgccttcctagaacaatggggtctcattaactaccaggtggatgctgagagtcgccca
accccaatggggccaccacccacctctcacttccacgtcttggcagacacaccctcaggg
ctagtgcctctgcagcccaagaccccacagggccgccaggttgatgctgataccaaggct
gggcgcaagggcaaagagctggatgacctggtgccagagaccgctaagggcaagccagag
ctgcagacctctgcttcccaacaaatgctcaacttccctgacaaaggcaaagagaaacca
acagacatgcagaactttgggctgcgtacagacatgtacacaaagaagaacgtcccctcc
aagagcaaagctgcggccagtgccactcgagagtggacagaacaggagactctgctgctc
ctggaggcactggaaatgtacaaagacgactggaacaaggtatcagaacatgtggggagc
cgcacgcaggacgagtgcatcttgcattttctccgtcttcccattgaagatccgtacctg
gaagactcagaggcctctctgggccccctggcctaccagcccatccccttcagtcagtca
ggcaaccctgtgatgagcaccgttgccttcctggcctccgtcgttgatcctcgagttgct
tctgctgctgcgaagtcggctctagaggagttctccaaaatgaaggaagaggtacccacg
gccttggtggaagcccatgttcggaaggtggaagaagcagccaaagtgacaggcaaggca
gaccctgccttcggtttggaaagtagcggtattgccggaaccacctctgatgagcctgaa
cggattgaggagagcggaactgacgaggcacgggcggagggccaggccacagaggagaag
aaggagcccaaggaaccccgagaaggagtcggggtcgtagaggaagaagcaaaggagaag
accagcgaggctcccaaaaaggatgaagagaaagggaaagaaggtgacagcgagaaggag
tcagagaagagtgatggggaccccgtagttgaccctgagaaggagaaggaaccaaaggag
gggcaggaggaagtgctgaaggaagtggtggagtcggagggggagaggaagaccaaggtg
gagagggacatcggtgagggcaatctctccaccgctgctgccgccgcgctggctgccgct
gccgtgaaggccaagcacttggctgctgttgaggagaggaagatcaagtctctggtggcc
ctgctggtggagactcagatgaaaaagttggagatcaaacttcggcactttgaggaactg
gagacgatcatggaccgggagcgagaagcactggagtatcagaggcagcagctcctggcc
gacaggcaagccttccacatggagcagctgaagtatgcggagatgagggctcggcagcag
cacttccaacaaatgcaccaacagcagcagcagccaccaccagccctgcccccaggctcc
cagcctatcccacctacaggcgctgctgggccacccacagtccatggcttggctatggct
ccggcctctgtggctcctgcccctcctggcagtggggcccctcctggaagcttgggcccc
tctgaacagattgggccacagcagcagcaaccagccggagccccgcagccgggggcagtt
ccaccaggggtaccaccccctggaccccatggcccctcaccgttccccaaccaacaaact
cctccctcaatgatgccaggggcagtgccaggcagcgggcacccaggcgtggcgggtaat
gctcctttgggtttgccttttggcatgccgcctcctcctcctcctgctccatccatcatc
ccatttggtagtctagccgactccatcagtattaaccttccccctcctcctaacctgcat
gggcatcaccaccatctcccgttcgccccgggcactctccccccacctaacttgcctgtg
tccatggcgaaccctctacatcctaacctgccggcgaccaccaccatgccatcttccttg
cctctcgggccggggctcggatccgccgcagcccagagccctgccattgtggcagctgtt
cagggcaacctcctgcccagtgccagcccactgccagacccaggcacccccctgcctcca
gaccccacggcccccagcccaggcacggtcacccctgtgccgcctccacagtga
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