Artibeus jamaicensis (Jamaican fruit-eating bat): 119040384
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Entry
119040384 CDS
T07223
Symbol
PABPC1
Name
(RefSeq) polyadenylate-binding protein 1 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03015
mRNA surveillance pathway
ajm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119040384 (PABPC1)
09123 Folding, sorting and degradation
03018 RNA degradation
119040384 (PABPC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajm03019
]
119040384 (PABPC1)
03041 Spliceosome [BR:
ajm03041
]
119040384 (PABPC1)
Messenger RNA biogenesis [BR:
ajm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119040384 (PABPC1)
mRNA cycle factors
Stress granule specific factors
119040384 (PABPC1)
Spliceosome [BR:
ajm03041
]
Complex C
Other components
Complex C specific factors
119040384 (PABPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_5
RRM_10
RBD_RDR6
RRM_occluded
RRM_3
YflT
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
119040384
NCBI-ProteinID:
XP_036989255
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDENGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
AYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPTSSQVPRVMSTQ
RVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQ
GQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPNLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKAVNSAAGVPTV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcccccagctaccctatggcctcgctctacgtgggggacctacacccc
gacgtgactgaggcgatgctctacgagaagttcagcccggccgggcccatcctttccatc
cgggtctgcagggacatgatcacccgccgctccttgggctacgcgtatgtgaacttccag
cagccggcagacgcggagcgtgctttggacaccatgaattttgatgttataaagggcaag
ccagtacgcatcatgtggtctcagcgtgatccatcacttcgcaaaagtggagtgggcaac
atattcattaaaaatttggacaaatctattgataataaagcactgtatgatacattttct
gcttttggtaacatcctttcatgtaaggtggtttgtgatgaaaatggctccaagggttat
ggatttgtacattttgaaacacaggaagcagctgaaagagctattgaaaaaatgaatggg
atgcttctaaatgatcgcaaagtatttgttggacgatttaagtctcgtaaagaacgagaa
gcagaacttggagccagggcaaaagagttcaccaacgtttacatcaagaattttggagaa
gacatggatgatgagcgccttaaggatctctttggcaagtttgggcctgccttgagtgtg
aaagtaatgaccgatgaaaatggaaaatccaaaggttttggatttgtaagcttcgaaagg
catgaagatgcacagaaagctgtggatgagatgaatggaaaggagcttaacggaaaacaa
atttatgttggccgagctcagaaaaaagtggaacggcagacggaacttaagcgcaaattt
gaacagatgaagcaagataggatcaccagataccagggtgttaacctttatgtgaaaaac
cttgatgatggcattgatgatgaacgtctccggaaagagttttctccatttggtacaatc
actagtgcaaaggttatgatggaaggtggtcgcagcaaagggtttggttttgtatgtttc
tcctcccccgaagaagccactaaagcagttacagagatgaatggtagaatcgtggctacc
aagccattgtatgtagctttagctcagcgcaaagaagaacgccaggctcacctcactaac
cagtacatgcagagaatggcaagtgtgagagctgtgccgaaccccgtgatcaacccctac
cagccagcacctccttcaggttacttcatggcagctatcccacagactcagaaccgtgct
gcatactaccctcctagccaaattgctcaactaagaccaagtcctcgctggactgctcag
ggtgccagacctcatccattccaaaatatgcccggtgctatccgcccagccgctcctaga
ccaccatttagtactatgagaccaacttcttcacaggttccacgagtcatgtccacgcag
cgtgttgctaacacatcaacacagacaatgggtccacgtcctgcagctgctgctgctgca
gctactcctgctgtccgcaccgttccacagtataaatacgctgcgggagttcgcaatcct
caacaacatcttaatgcacagccacaagttaccatgcagcagcctgctgttcatgtacaa
ggtcaggagcctttgactgcttccatgttggcatctgcccctcctcaagagcaaaagcaa
atgttgggtgaacggctgtttcctctcattcaagccatgcaccctaatcttgctggtaaa
atcactggcatgttgttggagattgataattcagaacttctccatatgcttgagtctccg
gagtctctccgttctaaagtcgatgaagctgtagctgtactacaagcccatcaagcgaag
gaggccgcccagaaagcagtgaacagcgccgccggcgttccaactgtttaa
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