Artibeus jamaicensis (Jamaican fruit-eating bat): 119041419
Help
Entry
119041419 CDS
T07223
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03082
ATP-dependent chromatin remodeling
ajm05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119041419 (PBRM1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
119041419 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajm03021
]
119041419 (PBRM1)
03036 Chromosome and associated proteins [BR:
ajm03036
]
119041419 (PBRM1)
Transcription machinery [BR:
ajm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119041419 (PBRM1)
Chromosome and associated proteins [BR:
ajm03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
119041419 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119041419
NCBI-ProteinID:
XP_036990581
LinkDB
All DBs
Position
Unknown
AA seq
1729 aa
AA seq
DB search
MRRLAFRGAGCALVKLKKLDSMGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLS
NLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVAQPIDLMKIQQ
KLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADD
EDDDEDGQDNQGTVTEGSSPSYLKEILEQLLEAIVVATNPSGHLISELFQKLPSKVQYPD
YYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKI
FYMKKAEIEHEMARSSLRMRTPSNLTAARLTGSTHSKGSLGEERNPTSKYYRNKRAVQGG
RLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPLYQLYDTVRSCRNNQ
GQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAK
RYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKRNTVDSE
MLGLRRLSSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEP
MDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKEL
GPLPDDDDMASPKLKLSRKSGVSPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFL
RLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLI
YKDALVLHKVLLETRRDLEGDEDSHVPNVTMLIQELIHNLFVSVMSHQDDEGRCYSDSLA
EIPAVDPSFPNRPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDA
VELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEK
REAEKSEDSSGASGLSGLNRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWE
DSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFK
LCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANAD
KGDDEKNTDNSEDNRTEDNFNLEKFPLQQEKEDVPVEMSNGEPGCHYFEQLRYNDMWLKV
GDCVFIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNL
EETCPMTCILGKCAVLSFKDYLSCRPTEIPENDVLLCESRYNESDKQMKKFKGLKRFSLS
AKVVDDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELEGGEDDIEEMGEEDSEVIEPP
SLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQ
HPDYSFGELSRLVGTEWRNLETAKKAEYEERAAKVAEQQERERAAQQQQPSASPRAGTPV
GALMGVVPPPTPMGMLNQQLTPVAGMMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPP
HHLPPGVPGLSGIPPPGVMNQGVTPMVGTPAPGGSSYGQQVGVLGPPGQQAPPPYPGPHP
TSPSVIQQPTTPMFVAPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHL
SKEQESRLPCHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNLENL
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcttttcgaggcgctggttgtgctctggtaaagctgaagaagttggat
tccatgggttccaaaagaagaagagcaacctccccttccagtagtgtcagcggggacttt
gatgatgggcaccattccgtgtctacaccaggcccaagcaggaaaaggaggagactttcc
aatcttccaactgtagatcctattgctgtgtgtcatgaactctacaacaccatccgggac
tacaaagatgaacagggcaggcttctctgtgaactcttcattagggcaccaaagcgaaga
aatcaaccagactattatgaagtggttgctcagcccattgacttgatgaaaatccaacag
aaactaaaaatggaagagtatgatgatgttaatctgctgactgctgacttccagctactt
tttaacaatgcaaaggcatattataagccagattctcctgaatataaagctgcttgcaaa
ctatgggatttgtatcttcgaacaagaaatgaatttgttcagaaaggagaagcagatgat
gaagatgatgatgaagatgggcaggacaatcaaggcacagtgactgaaggatcttctcca
agttacttgaaggagatcctggagcagcttcttgaagccatagttgtagccacaaatcca
tcaggacatctcattagtgaactttttcagaaactgccttctaaagtgcaatatccagac
tattatgcaataattaaggaacctatagatctcaagaccattgcccagaggatacagaat
ggaagctacaagagtattcatgcaatggccaaagatatagatctcctagcaaaaaatgcc
aaaacttataatgagcctggttctcaagtattcaaggatgcaaattctattaaaaaaata
ttttatatgaaaaaagcagaaattgaacatgaaatggctaggtcaagccttcgaatgagg
actccatcaaatttgactgcagccaggctgacaggttccacgcatagtaaaggaagcctt
ggtgaagagagaaatcccactagcaagtattaccgtaataaaagagcagtccaagggggt
cgtttatcagcaattaccatggcacttcagtatggctcagaaagtgaagaggatgctgct
ttagctgctgcacgctatgaagaaggagagtcggaagcagagagcattacttcatttatg
gatgtttcaaatcctttatatcagctttatgacacagttaggagctgtcggaataaccaa
ggacagctaatagcagaaccttttttccatttgccttcaaagaaaaaataccctgattat
tatcagcaaattaaaatgcccatatcactacaacagatcagaacaaaactaaagaaccaa
gaatatgaaactttggatcatttggagtgtgatctgaatttaatgtttgaaaatgccaaa
cgctataatgttcccaattcagccatatacaagcgagttctaaaattgcagcaagtcatg
caggcaaagaagaaggagcttgccagaagagacgacattgaggatggagacagcatgatt
tcttcagccacttctgatactggtagtgccaaaagaaaaaggaacactgttgacagtgag
atgttgggtctcaggaggctatccagtaaaaagaacataagaaagcagcgaatgaaaatc
ttattcaatgtcgttcttgaagctcgtgagccaggttcaggcagaagactttgtgatcta
tttatggttaaaccatctaaaaaggactatcctgattattataaaatcattttggagcca
atggacttgaaaataattgagcataacatccgcaatgacaaatatgcaggggaagaggga
atgatagaagacatgaagttgatgttccggaatgccaggcactataatgaggagggctcc
caggtgtacaatgatgcgcacatcctggagaagttactcaaggataaaaggaaagaactg
ggcccactgcctgacgatgatgacatggcttctcccaaactcaaactgagtaggaaaagt
ggtgtttctcctaaaaagtcaaaatacatgactccaatgcagcagaaactaaatgaagtc
tatgaagctgtaaagaactatacagataagaggggccgccgcctcagtgccatatttctg
agacttccctccagatctgagctgccggactattatctgaccattaaaaagcctatggac
atggaaaaaattcgaagtcatatgatggccaacaaataccaagacatagactccatggtt
gaggactttgtcatgatgtttaataatgcctgtacatacaatgagcctgagtctttgatc
tacaaagatgcccttgtcctacacaaagtcctgcttgaaactcggagagatctggaggga
gatgaggactctcatgttccaaatgtgaccatgctgattcaagagcttatccacaatctt
tttgtgtctgtcatgagtcatcaggatgatgagggaagatgctacagtgattcattagca
gaaattcctgctgtggaccccagctttccaaacagacctcctctcacttttgacataatt
agaaagaatgttgaaaataatcgctaccggcggcttgatttatttcaagagcatatgttt
gaagtattagaaagggcaagaaggatgaatcggacagattctgaaatatatgaagatgcg
gtagaacttcagcagttttttattaaaattcgtgatgaactctgcaaaaatggagagatc
cttctttcaccagcactcagctatacaacaaaacatttgcataatgatgtggagaaagag
aaaaaggaaaaattgccaaaagaaatagaggaagataaactaaaacgagaagaagaaaaa
agagaggctgaaaagagtgaagattcctcaggtgcttcaggcctctcaggcttaaatcgc
acatacagccaggactgcagctttaagaacagcatgtaccatgttggagattatgtctat
gtagagcccgcagaggccaacctacaacctcatatagtctgtattgagagactgtgggaa
gattctgctggggaaaaatggttatatggctgttggttttatcggccaaatgaaacattc
catttggctacacgaaaattcctagaaaaagaagtttttaagagcgactattacaacaaa
gttcctgttagtaaaattctaggaaaatgtgtggtcatgtttgtcaaggaatactttaaa
ttatgtccagaaaactttcgagatgaagatgtttttgtctgtgaatcacggtattctgcc
aaaaccaaatcttttaagaaaattaaactgtggaccatgcccatcagttcggttaggttt
gtccctcgggatgtacccttgccagtggtccgagtggcctctgtatttgcaaatgcagat
aaaggggatgatgaaaagaacacagacaactcagaagacaatcgaactgaagacaatttt
aacttggaaaagtttcctttacaacaggagaaggaagatgtccctgtggaaatgtccaat
ggggaaccaggttgccactactttgagcagctccgttataatgacatgtggctgaaggtt
ggcgactgtgtcttcattaagtcccatggccttgtgcgtcctcgtgtgggcagaattgaa
aaggtatgggtccgagatggagctgcatatttttatggccccatctttattcacccagaa
gagacagaacatgagcccacaaaaatgttctacaaaaaagaagtgtttctaagtaatcta
gaagaaacctgtcccatgacatgtattctgggaaagtgtgctgtgttgtcattcaaggac
tacctctcctgcaggccaactgaaataccagaaaatgatgttctgctttgtgagagccgc
tacaatgagagtgacaagcaaatgaagaagttcaagggactgaagaggttttcactctct
gctaaagtagtagatgatgaaatttattacttcagaaaaccaattgttcctcagaaggag
ccctcacctttgttggaaaagaagatccagttactagaagctaaatttgctgagctagaa
ggtggagaggatgatattgaagagatgggagaggaggatagtgaggtcattgagcctcct
tctctacctcaacttcagactcccttggccagtgagctggatctcatgccctacacaccc
ccacagtctaccccaaagtctgccaaaggcagtgcaaagaaggaaggctctaagaggaaa
attaacatgagtggctacatcctgttcagcagtgagatgagagctgtgattaaggcccag
cacccagactactcttttggggagctcagccgactggtggggacagaatggagaaacctt
gagacagccaagaaagcagaatatgaagagcgggcagctaaagttgctgagcagcaggag
agagagcgagcagcacagcaacagcagccgagtgcttctccccgagcaggcacccctgtg
ggggctctcatgggggtggtgccaccaccaacaccaatggggatgctcaatcagcagttg
acacctgttgcaggcatgatgggtggctatccgccaggccttccacctttgcagggccca
gttgatggccttgttagcatgggcagcatgcagccacttcaccctggggggcctccaccc
caccatcttccgccaggtgtgcccggcctctcgggcatcccaccaccgggtgtgatgaat
caaggggtgacccctatggtagggactccagcaccaggtggaagttcatatggacagcag
gtaggagttttggggcctccagggcaacaggcaccacctccataccctggtccacatcca
accagcccctctgtcatacagcagccaacaacgcctatgtttgtggctcctccacccaag
acccaacggcttctccactcagaggcctacctgaaatacattgaaggactcagtgctgag
tccaacagcattagcaagtgggaccagactctggcagctcgaagacgtgatgtccatttg
tcaaaagaacaagagagccgccttccctgtcactggctgaaaagtaaaggggcccacacc
accatggcagatgccctctggcgccttcgggatttgatgctccgagacactctcaacatt
cgccaagcatacaatctagaaaacctttaa
DBGET
integrated database retrieval system
