KEGG   Artibeus jamaicensis (Jamaican fruit-eating bat): 119043707
Entry
119043707         CDS       T07223                                 
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19 isoform X1
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
ajm  Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03040  Spliceosome
ajm04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ajm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119043707 (PRPF19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119043707 (PRPF19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ajm03041]
    119043707 (PRPF19)
   04121 Ubiquitin system [BR:ajm04121]
    119043707 (PRPF19)
   03400 DNA repair and recombination proteins [BR:ajm03400]
    119043707 (PRPF19)
Enzymes [BR:ajm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119043707 (PRPF19)
Spliceosome [BR:ajm03041]
 Complex B
  Other components
   Prp19 complex
    119043707 (PRPF19)
 Complex C
   Prp19-CDC5 complex
    119043707 (PRPF19)
Ubiquitin system [BR:ajm04121]
 Ubiquitin ligases (E3)
  U-box type E3
   119043707 (PRPF19)
DNA repair and recombination proteins [BR:ajm03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    119043707 (PRPF19)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Prp19 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_WDR41 Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR19_1st U-box Beta-prop_SPT8 PROPPIN Beta-prop_ACSF4 Beta-prop_Nup120_160 eIF2A Cytochrom_D1 RMC1_N Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_LRRK2 DUF1830 zf-Nse ATG16 Cep57_MT_bd
Other DBs
NCBI-GeneID: 119043707
NCBI-ProteinID: XP_036993686
LinkDB
Position
Unknown
AA seq 508 aa
MMFSVLIVSSVSNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIK
VAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRV
IARLTKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKL
QDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNK
ILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNT
SCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCA
QFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSV
KLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSG
LTTGVAFGHHAKFIASTGMDRSLKFYSL
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgatgttttccgttctcattgtttcatcagtctccaatgaagtgccagagcacccgtgt
gtgtcccctgtctctaatcatgtctacgagcggcggctcatcgagaagtacatcgcagag
aacggcacagaccccatcaacaaccagcctctgtccgaggagcagctcatcgacatcaaa
gttgctcacccgatccggcccaagcctccctcggccaccagcatccctgccattctgaaa
gccttacaggatgagtgggacgcagtcatgctacacagcttcaccctgcgccagcagctg
cagacgacgcgccaggagctgtctcacgctctctaccagcatgacgctgcctgccgagtc
atcgcccgtctcaccaaggaagtcactgctgcccgagaagctctggctaccctgaaacca
caggccggtctcattgtgccccaggctgtgccaagctcacagccaagtgttgtgggtgca
ggtgagccgatggatttgggcgagctggtgggaatgacccctgagattatccagaagctt
caagacaaggccactgtgctaaccacggagcgtaagaagagagggaagactgtgcctgaa
gagctcgtgaagccggaagagctcagcaaataccggcaggtggcatcccatgtggggttg
cacagtgccagcattcctgggatcctcgccctggacctctgcccttccgacaccaacaag
atcctcactggtggggcggataaaaatgttgttgtcttcgacaagagttctgagcaaatc
ctggccaccctcaaaggccataccaagaaagtcaccagtgtggtgtttcacccttcccag
gagctggtgttttctgcctccccggatgccaccatcaggatttggtcggtcccgaacacc
tcttgtgtacaggttgttcgggcccatgagagcgcggtgacaggcctcagccttcacgcc
actggtgactatctcctgagctcctctgatgaccagtactgggccttctctgacatccag
acagggcgtgtgctcaccaaggtgacggacgagacctccggctgctctctcacctgtgcg
cagttccatcccgatggactcatttttggaacggggaccatggactctcagataaagatc
tgggacttaaaggagcgcaccaacgtggccaacttccccggccactcgggccccattacc
agcattgccttctctgagaatggctactacctggccactgcggccgacgactcctccgtc
aagctctgggatctgcgtaagctcaagaactttaagacattgcagctggataacaacttt
gaggtgaagtcactgatctttgaccagagtggaacctacctggccctggggggcacagac
gtccagatctacatctgcaaacagtggacagagattcttcacttcacagagcacagtggc
ctgaccacgggggtggcctttgggcaccacgccaagttcatcgcttccacaggcatggac
aggagcctcaagttctacagcctgtag

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